Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 7.8e-123 443.7 212 100.0
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 3.5e-75 285.4 193 72.5
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 4.6e-75 285.0 199 69.8
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 6.0e-75 284.6 191 72.8
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 3.0e-74 282.3 197 69.5
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 3.9e-74 282.0 194 71.6
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 1.5e-73 280.0 196 69.4
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 1.9e-73 279.6 198 71.7
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 4.3e-73 278.5 193 69.9
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 4.3e-73 278.5 196 68.9
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 5.6e-73 278.1 198 70.2
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 2.8e-72 275.8 193 67.4
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 2.8e-72 275.8 197 68.0
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 6.2e-72 274.6 193 66.8
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 1.8e-71 273.1 198 67.7
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 6.9e-71 271.2 193 67.4
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 9.0e-71 270.8 200 67.0
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 9.0e-71 270.8 196 68.9
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 2.6e-70 269.2 193 67.9
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 4.5e-70 268.5 192 67.2
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 7.6e-70 267.7 190 66.3
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 4.9e-69 265.0 198 67.7
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.1e-68 263.8 193 65.8
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.1e-68 263.8 193 65.8
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 4.2e-68 261.9 198 66.2
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 1.2e-67 260.4 192 65.1
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 1.3e-66 256.9 199 66.8
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 3.0e-66 255.8 192 64.1
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 8.7e-66 254.2 168 70.2
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 8.7e-66 254.2 168 70.2
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 1.9e-65 253.1 190 65.8
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 4.3e-65 251.9 193 66.3
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 5.7e-65 251.5 203 63.5
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 7.4e-65 251.1 161 72.7
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 9.6e-65 250.8 205 62.4
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 9.6e-65 250.8 192 64.6
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 1.3e-64 250.4 195 64.6
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 2.1e-64 249.6 197 61.9
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 2.8e-64 249.2 197 64.5
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 8.2e-64 247.7 197 65.0
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 1.1e-63 247.3 170 71.2
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 1.4e-63 246.9 195 62.6
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 4.1e-63 245.4 188 66.0
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 6.9e-63 244.6 180 65.0
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 6.9e-63 244.6 194 61.9
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 2.0e-62 243.0 213 59.6
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.4e-62 242.3 174 69.0
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 4.5e-62 241.9 171 67.3
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 1.3e-61 240.4 218 59.6
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 1.7e-61 240.0 204 60.8
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 1.7e-61 240.0 198 63.1
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.9e-61 239.2 205 60.5
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 2.9e-61 239.2 196 59.7
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 5.0e-61 238.4 199 62.8
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 5.0e-61 238.4 214 57.9
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 9.3e-60 234.2 197 61.4
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 2.1e-59 233.0 201 60.2
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 2.7e-59 232.6 195 61.0
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 2.3e-58 229.6 197 59.4
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 2.3e-58 229.6 197 58.4
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 3.9e-58 228.8 195 59.5
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 3.9e-58 228.8 177 65.0
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 5.1e-58 228.4 179 63.1
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 5.1e-58 228.4 199 58.3
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 6.7e-58 228.0 193 60.6
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 6.7e-58 228.0 193 60.6
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 8.7e-58 227.6 174 64.4
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 1.1e-57 227.3 196 60.2
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 1.3e-56 223.8 139 74.8
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 1.3e-56 223.8 194 59.3
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 2.2e-56 223.0 193 58.0
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 2.8e-56 222.6 195 59.5
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 6.3e-56 221.5 194 59.8
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 1.4e-55 220.3 161 64.6
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 3.1e-55 219.2 202 55.0
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 6.9e-55 218.0 196 59.2
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 2.0e-54 216.5 186 59.7
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 5.9e-54 214.9 196 60.2
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 7.7e-54 214.5 196 60.7
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 1.9e-52 209.9 178 60.7
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 1.9e-52 209.9 178 60.7
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 1.2e-51 207.2 126 77.0
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 1.5e-49 200.3 198 54.5
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 2.5e-49 199.5 196 56.6
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 1.3e-48 197.2 161 62.7
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 1.7e-48 196.8 160 63.1
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.1e-47 192.6 192 54.7
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 1.5e-46 190.3 205 48.3
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 4.5e-46 188.7 134 68.7
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 1.7e-45 186.8 106 77.4
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 5.0e-45 185.3 135 65.9
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 1.6e-43 180.3 164 56.7
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 2.7e-43 179.5 170 54.7
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 4.7e-43 178.7 163 59.5
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 6.7e-42 174.9 151 57.6
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.4e-41 172.2 135 64.4
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 6.3e-40 168.3 195 45.1
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 7.2e-36 154.8 171 46.8
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 1.6e-35 153.7 183 48.6
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 3.0e-34 149.4 102 71.6
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.5e-33 147.1 101 68.3
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 2.6e-33 146.4 94 72.3
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 2.6e-33 146.4 163 50.9
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 2.2e-32 143.3 176 42.6
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 1.8e-23 113.6 76 71.1
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 7.7e-22 108.2 81 67.9
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 1.7e-21 107.1 132 45.5
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 4.7e-19 99.0 64 71.9
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 4.4e-17 92.4 122 39.3
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 9.8e-17 91.3 176 37.5
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.3e-12 76.3 62 62.9
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 2.3e-10 70.1 37 75.7
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 3.0e-10 69.7 64 51.6
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 6.8e-10 68.6 38 71.1
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 2.0e-09 67.0 179 29.6
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 1.8e-07 60.5 40 67.5
CAN.G1161.15 Capsicum annuum HOM05D000064 ORTHO05D007563 7.0e-07 58.5 41 58.5
SalBow3G2205 Salvia bowleyana HOM05D006411 ORTHO05D007563 1.2e-06 57.8 46 65.2
AagrBONN_evm.TU.Sc2ySwM_344.2366 Anthoceros agrestis HOM05D006411 ORTHO05D007563 7.8e-06 55.1 69 42.0


User provided reference genes

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