Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc10g0010400 Simmondsia chinensis HOM05D004497 ORTHO05D005539 1.2e-208 729.6 359 100.0
Hund03342 Selenicereus undatus HOM05D004497 ORTHO05D005539 1.2e-155 553.5 356 74.7
Haze_07247 Corylus avellana HOM05D004497 ORTHO05D005539 1.5e-155 553.1 369 70.2
RcHm_v2.0_Chr7g0190661 Rosa chinensis HOM05D004497 ORTHO05D005539 4.5e-155 551.6 358 71.8
EL10As4g23444 Beta vulgaris HOM05D004497 ORTHO05D005539 2.2e-154 549.3 359 74.4
FvH4_5g07760 Fragaria vesca HOM05D004497 ORTHO05D005539 5.5e-153 544.7 357 71.4
Gohir.D09G246800 Gossypium hirsutum HOM05D004497 ORTHO05D005539 7.1e-153 544.3 355 71.5
FAN08G0052 Fragaria x ananassa HOM05D004497 ORTHO05D005539 1.2e-152 543.5 357 71.7
FAN18G2816 Fragaria x ananassa HOM05D004497 ORTHO05D005539 1.6e-152 543.1 357 71.1
FAN04G2053 Fragaria x ananassa HOM05D004497 ORTHO05D005539 2.7e-152 542.3 359 71.3
HanXRQChr05g0153981 Helianthus annuus HOM05D004497 ORTHO05D005539 2.7e-152 542.3 358 69.8
CiPaw.08G116800 Carya illinoinensis HOM05D004497 ORTHO05D005539 3.5e-152 542.0 359 69.4
Duzib205G0501 Durio zibethinus HOM05D004497 ORTHO05D005539 1.0e-151 540.4 356 71.1
Cfa013402 Carpinus fangiana HOM05D004497 ORTHO05D005539 2.3e-151 539.3 358 69.3
COL.COLO4_28066 Corchorus olitorius HOM05D004497 ORTHO05D005539 3.0e-151 538.9 355 70.1
Gohir.A09G246200 Gossypium hirsutum HOM05D004497 ORTHO05D005539 3.9e-151 538.5 355 71.0
Thecc.03G125300 Theobroma cacao HOM05D004497 ORTHO05D005539 5.1e-151 538.1 355 70.1
Gorai.006G271300 Gossypium raimondii HOM05D004497 ORTHO05D005539 6.7e-151 537.7 355 71.3
Rhsim08G0187300 Rhododendron simsii HOM05D004497 ORTHO05D005539 5.7e-150 534.6 362 68.8
Gohir.A12G276900 Gossypium hirsutum HOM05D004497 ORTHO05D005539 9.7e-150 533.9 357 70.9
QL10p004476 Quercus lobata HOM05D004497 ORTHO05D005539 9.7e-150 533.9 358 70.4
Actinidia25597 Actinidia chinensis HOM05D004497 ORTHO05D005539 2.2e-149 532.7 357 68.9
Potri.015G092400 Populus trichocarpa HOM05D004497 ORTHO05D005539 2.2e-149 532.7 358 71.5
GSVIVG01013111001 Vitis vinifera HOM05D004497 ORTHO05D005539 2.8e-149 532.3 358 70.7
Atru.chr3.3406 Acer truncatum HOM05D004497 ORTHO05D005539 6.3e-149 531.2 357 69.2
Ah.08g212900 Amaranthus hybridus HOM05D004497 ORTHO05D005539 8.2e-149 530.8 362 72.1
Nitab4.5_0000903g0080 Nicotiana tabacum HOM05D004497 ORTHO05D005539 8.2e-149 530.8 355 71.0
CANSAT56G3508 Cannabis sativa HOM05D004497 ORTHO05D005539 1.4e-148 530.0 357 70.6
Nitab4.5_0002978g0150 Nicotiana tabacum HOM05D004497 ORTHO05D005539 1.8e-148 529.6 355 70.7
Potri.012G095100 Populus trichocarpa HOM05D004497 ORTHO05D005539 4.1e-148 528.5 358 71.2
Lsat_1_v5_gn_5_13520 Lactuca sativa HOM05D004497 ORTHO05D005539 5.3e-148 528.1 358 69.3
Ciclev10020238m.g Citrus clementina HOM05D004497 ORTHO05D005539 1.2e-147 526.9 357 69.7
CSS0032894 Camellia sinensis var. sinensis HOM05D004497 ORTHO05D005539 3.4e-147 525.4 359 69.1
Eucgr.K00186 Eucalyptus grandis HOM05D004497 ORTHO05D005539 1.0e-146 523.9 358 67.9
TWI14G0260 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 1.7e-146 523.1 358 67.9
ECA246G4485 Erigeron canadensis HOM05D004497 ORTHO05D005539 3.8e-146 521.9 358 68.7
QL07p000007 Quercus lobata HOM05D004497 ORTHO05D005539 6.5e-146 521.2 358 69.3
QL93p0225_0015 Quercus lobata HOM05D004497 ORTHO05D005539 6.5e-146 521.2 358 69.3
Sabra15G0114200 Salix brachista HOM05D004497 ORTHO05D005539 1.1e-145 520.4 358 69.0
Lj9A476T57 Lonicera japonica HOM05D004497 ORTHO05D005539 1.9e-145 519.6 340 70.9
TAR625G0069 Trochodendron aralioides HOM05D004497 ORTHO05D005539 3.2e-145 518.8 358 67.6
Eucgr.C01065 Eucalyptus grandis HOM05D004497 ORTHO05D005539 4.2e-145 518.5 358 67.9
Sopen08g004010 Solanum pennellii HOM05D004497 ORTHO05D005539 9.4e-145 517.3 355 69.6
vmacro20468 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 9.4e-145 517.3 374 65.5
CsaV3_1G009480 Cucumis sativus L. HOM05D004497 ORTHO05D005539 2.1e-144 516.2 358 68.4
Solyc08g008160.4 Solanum lycopersicum HOM05D004497 ORTHO05D005539 2.1e-144 516.2 355 69.6
Migut.I00519 Erythranthe guttata HOM05D004497 ORTHO05D005539 3.6e-144 515.4 359 69.1
PGSC0003DMG400005828 Solanum tuberosum HOM05D004497 ORTHO05D005539 3.6e-144 515.4 355 69.3
QL04p081834 Quercus lobata HOM05D004497 ORTHO05D005539 1.8e-143 513.1 372 66.7
SGA_v2.0_scaffold215G42316 Striga asiatica HOM05D004497 ORTHO05D005539 5.1e-143 511.5 356 68.0
MSTRG.22910 Avicennia marina HOM05D004497 ORTHO05D005539 8.8e-143 510.8 360 68.3
MD14G1161100 Malus domestica HOM05D004497 ORTHO05D005539 1.5e-142 510.0 361 67.6
Nn4g26409 Nelumbo nucifera HOM05D004497 ORTHO05D005539 1.5e-142 510.0 358 67.3
FAN13G1359 Fragaria x ananassa HOM05D004497 ORTHO05D005539 2.0e-142 509.6 364 67.0
TAR629G1275 Trochodendron aralioides HOM05D004497 ORTHO05D005539 2.5e-142 509.2 368 65.5
TPR.G34454 Trifolium pratense HOM05D004497 ORTHO05D005539 4.3e-142 508.4 358 66.8
Lalb_Chr03g0040831 Lupinus albus HOM05D004497 ORTHO05D005539 7.4e-142 507.7 359 65.5
ClCG03G003620 Citrullus lanatus HOM05D004497 ORTHO05D005539 1.3e-141 506.9 365 66.6
PGR083G2085 Punica granatum HOM05D004497 ORTHO05D005539 1.7e-141 506.5 362 66.0
Ca_09070_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 3.7e-141 505.4 358 66.5
Ca_04603_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 4.8e-141 505.0 358 66.5
MD06G1147200 Malus domestica HOM05D004497 ORTHO05D005539 8.2e-141 504.2 361 67.0
Peaxi162Scf00078g00424 Petunia axillaris HOM05D004497 ORTHO05D005539 1.4e-140 503.4 339 70.2
Psat3g028160 Pisum sativum HOM05D004497 ORTHO05D005539 2.4e-140 502.7 358 66.2
Glyma.16G034400 Glycine max HOM05D004497 ORTHO05D005539 3.1e-140 502.3 359 65.2
Phvul.003G017500 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 5.3e-140 501.5 359 65.2
Lj1g0020744 Lotus japonicus HOM05D004497 ORTHO05D005539 6.9e-140 501.1 356 66.9
Medtr7g106650 Medicago truncatula HOM05D004497 ORTHO05D005539 9.1e-140 500.7 358 65.9
Sed0020059 Sechium edule HOM05D004497 ORTHO05D005539 2.0e-139 499.6 357 66.1
Glyma.07G068400 Glycine max HOM05D004497 ORTHO05D005539 1.0e-138 497.3 356 65.4
SalBow8G1477 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.7e-138 496.5 359 66.3
arahy.Tifrunner.gnm1.ann1.0L2FVX Arachis hypogaea HOM05D004497 ORTHO05D005539 2.2e-138 496.1 358 67.0
arahy.Tifrunner.gnm1.ann1.16KDXT Arachis hypogaea HOM05D004497 ORTHO05D005539 3.8e-138 495.4 358 66.8
Dinv04858 Davidia involucrata HOM05D004497 ORTHO05D005539 1.1e-137 493.8 321 72.0
VMungo0331G1674 Vigna mungo HOM05D004497 ORTHO05D005539 3.2e-137 492.3 359 63.5
Oeu005018.3 Olea europaea HOM05D004497 ORTHO05D005539 9.4e-137 490.7 397 61.2
THA.LOC104820611 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 9.4e-137 490.7 355 65.4
MELO3C002347.2 Cucumis melo HOM05D004497 ORTHO05D005539 7.9e-136 487.6 340 67.9
SalBow5G0098 Salvia bowleyana HOM05D004497 ORTHO05D005539 3.0e-135 485.7 385 62.3
SalBow5G4825 Salvia bowleyana HOM05D004497 ORTHO05D005539 3.0e-135 485.7 385 62.3
Dinv11148 Davidia involucrata HOM05D004497 ORTHO05D005539 6.7e-135 484.6 335 69.0
THA.LOC104814264 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 1.1e-134 483.8 355 63.9
Manes.14G053800 Manihot esculenta HOM05D004497 ORTHO05D005539 4.4e-134 481.9 345 66.7
PSO782G0077 Papaver somniferum HOM05D004497 ORTHO05D005539 9.7e-134 480.7 374 62.0
Cc05_g04600 Coffea canephora HOM05D004497 ORTHO05D005539 1.3e-133 480.3 355 64.5
Aqoxy5G03475 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 1.7e-133 479.9 357 63.3
PSO063G4711 Papaver somniferum HOM05D004497 ORTHO05D005539 2.2e-133 479.6 374 62.0
MBI11_g15865_MAGBIO Magnolia biondii HOM05D004497 ORTHO05D005539 3.1e-132 475.7 360 62.5
AUR62025903 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.0e-130 470.7 360 66.1
CDE08G0729 Ceratophyllum demersum HOM05D004497 ORTHO05D005539 8.5e-130 467.6 360 62.8
Sp1g25270 Schrenkiella parvula HOM05D004497 ORTHO05D005539 8.8e-127 457.6 358 60.1
Thhalv10007651m.g Eutrema salsugineum HOM05D004497 ORTHO05D005539 2.0e-126 456.4 358 60.3
AT1G29320 Arabidopsis thaliana HOM05D004497 ORTHO05D005539 4.4e-126 455.3 358 61.2
DCAR_012679 Daucus carota HOM05D004497 ORTHO05D005539 2.8e-125 452.6 329 65.0
A08p25140 Brassica napus HOM05D004497 ORTHO05D005539 3.7e-125 452.2 358 58.9
CARHR028640 Cardamine hirsuta HOM05D004497 ORTHO05D005539 3.7e-125 452.2 358 59.8
AL1G43130 Arabidopsis lyrata HOM05D004497 ORTHO05D005539 6.3e-125 451.4 358 60.6
C03p75750 Brassica napus HOM05D004497 ORTHO05D005539 8.2e-125 451.1 358 59.2
BcaC01g00099 Brassica carinata HOM05D004497 ORTHO05D005539 1.8e-124 449.9 358 59.2
Carub.0001s2754 Capsella rubella HOM05D004497 ORTHO05D005539 5.3e-124 448.4 367 58.3
BolC3t19835H Brassica oleracea HOM05D004497 ORTHO05D005539 9.1e-124 447.6 358 58.7
BraA09t39216Z Brassica rapa HOM05D004497 ORTHO05D005539 5.9e-123 444.9 358 58.1
BcaB03g12154 Brassica carinata HOM05D004497 ORTHO05D005539 1.0e-122 444.1 359 58.5
AUR62025086 Chenopodium quinoa HOM05D004497 ORTHO05D005539 3.8e-122 442.2 352 64.2
BcaB07g32523 Brassica carinata HOM05D004497 ORTHO05D005539 6.5e-122 441.4 361 59.0
Prupe.1G584300 Prunus persica HOM05D004497 ORTHO05D005539 5.5e-121 438.3 361 60.9
Aa31LG6G6220 Aethionema arabicum HOM05D004497 ORTHO05D005539 2.1e-120 436.4 359 59.1
BraA08t34469Z Brassica rapa HOM05D004497 ORTHO05D005539 3.6e-120 435.6 385 54.8
C05p28100 Brassica napus HOM05D004497 ORTHO05D005539 6.1e-120 434.9 358 57.3
BolC5t31537H Brassica oleracea HOM05D004497 ORTHO05D005539 6.1e-120 434.9 358 57.3
BcaC05g26958 Brassica carinata HOM05D004497 ORTHO05D005539 8.0e-120 434.5 358 57.3
TWI39G1139 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 8.0e-120 434.5 391 56.8
Zm00001eb105680 Zea mays HOM05D004497 ORTHO05D005539 1.5e-118 430.3 356 58.4
A09p36980 Brassica napus HOM05D004497 ORTHO05D005539 2.0e-118 429.9 358 56.7
HPP92_023861 Vanilla planifolia HOM05D004497 ORTHO05D005539 2.4e-116 422.9 357 57.1
ATR0171G018 Amborella trichopoda HOM05D004497 ORTHO05D005539 1.2e-115 420.6 374 54.5
AUR62032705 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.7e-114 416.8 359 59.9
CiPaw.11G010200 Carya illinoinensis HOM05D004497 ORTHO05D005539 1.1e-113 414.1 284 67.6
Duzib068G0683 Durio zibethinus HOM05D004497 ORTHO05D005539 5.5e-113 411.8 288 67.4
Cfa014010 Carpinus fangiana HOM05D004497 ORTHO05D005539 3.6e-112 409.1 358 56.7
SEGI_30468 Sequoiadendron giganteum HOM05D004497 ORTHO05D005539 1.5e-110 403.7 361 53.7
Cpa.g.sc166.23 Carica papaya HOM05D004497 ORTHO05D005539 5.0e-106 388.7 291 60.8
SHI10599 Sapria himalayana HOM05D004497 ORTHO05D005539 1.1e-105 387.5 322 58.4
Sabra12G0069700 Salix brachista HOM05D004497 ORTHO05D005539 2.8e-101 372.9 301 60.8
Sed0003097 Sechium edule HOM05D004497 ORTHO05D005539 7.8e-99 364.8 250 68.0
unitig_699.g19657 Utricularia gibba HOM05D004497 ORTHO05D005539 1.6e-96 357.1 350 53.7
AUR62025094 Chenopodium quinoa HOM05D004497 ORTHO05D005539 2.6e-94 349.7 299 59.5
Aqoxy5G03495 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 5.8e-94 348.6 293 57.0
Pp3c13_24500 Physcomitrium patens HOM05D004497 ORTHO05D005539 9.5e-89 331.3 388 45.9
Mapoly0079s0016 Marchantia polymorpha HOM05D004497 ORTHO05D005539 1.8e-87 327.0 357 47.3
Os07g0506700 Oryza sativa ssp. japonica HOM05D004497 ORTHO05D005539 6.8e-87 325.1 294 55.1
Nitab4.5_0003013g0030 Nicotiana tabacum HOM05D004497 ORTHO05D005539 4.6e-83 312.4 338 52.4
SMO165G0173 Selaginella moellendorffii HOM05D004497 ORTHO05D005539 7.8e-83 311.6 353 46.5
vmacro19222 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 2.5e-73 280.0 337 44.8
Zm00001eb322320 Zea mays HOM05D004497 ORTHO05D005539 3.4e-70 269.6 177 67.8
AUR62029644 Chenopodium quinoa HOM05D004497 ORTHO05D005539 2.3e-66 256.9 229 59.4
Actinidia19491 Actinidia chinensis HOM05D004497 ORTHO05D005539 4.9e-61 239.2 324 43.2
RcHm_v2.0_Chr0c30g0501231 Rosa chinensis HOM05D004497 ORTHO05D005539 1.1e-57 228.0 358 40.2
RcHm_v2.0_Chr3g0452771 Rosa chinensis HOM05D004497 ORTHO05D005539 1.1e-57 228.0 358 40.2
AagrBONN_evm.TU.Sc2ySwM_344.3271 Anthoceros agrestis HOM05D000006 ORTHO05D004030 2.5e-57 226.9 300 41.3
AUR62025088 Chenopodium quinoa HOM05D004497 ORTHO05D005539 3.6e-56 223.0 219 54.3
SalBow8G1815 Salvia bowleyana HOM05D004497 ORTHO05D005539 4.2e-52 209.5 124 79.0
Ca_16680_v3 Cicer arietinum L. HOM05D000160 ORTHO05D000496 1.6e-51 207.6 134 68.7
CBR_g31949 Chara braunii HOM05D004497 ORTHO05D005539 4.0e-47 193.0 353 34.6
RcHm_v2.0_Chr5g0041021 Rosa chinensis HOM05D004497 ORTHO05D005539 8.4e-45 185.3 361 34.9
AUR62025079 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.2e-35 154.8 122 60.7
Gohir.D13G181701 Gossypium hirsutum HOM05D004497 ORTHO05D005539 9.4e-28 128.6 104 58.7
Cre17.g718650 Chlamydomonas reinhardtii HOM05D004497 ORTHO05D005539 3.1e-23 113.6 386 26.2
MCO03G018 Micromonas commoda HOM05D004497 ORTHO05D005539 5.9e-22 109.4 371 27.0
Oeu006698.1 Olea europaea HOM05D004497 ORTHO05D005539 9.4e-20 102.1 71 73.2
AUR62025092 Chenopodium quinoa HOM05D004497 ORTHO05D005539 3.3e-17 93.6 53 81.1
PRCOL_00003967 Prasinoderma coloniale HOM05D004497 ORTHO05D005539 6.3e-16 89.4 307 24.8
TAR371G1248 Trochodendron aralioides HOM05D004497 ORTHO05D005539 1.4e-15 88.2 124 40.3
C04p39580 Brassica napus HOM05D004497 ORTHO05D005539 4.1e-15 86.7 87 51.7
BolC4t25523H Brassica oleracea HOM05D004497 ORTHO05D005539 4.1e-15 86.7 87 51.7
Phvul.003G017700 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 1.5e-12 78.2 75 52.0
COL.COLO4_36170 Corchorus olitorius HOM05D021494 ORTHO05D022415 6.1e-11 72.8 41 80.5


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