Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc10g0008990 Simmondsia chinensis HOM05D007187 ORTHO05D009219 8.4e-163 577.0 304 100.0
PSO063G6433 Papaver somniferum HOM05D007187 ORTHO05D009219 7.3e-74 281.6 296 54.1
Cfa020663 Carpinus fangiana HOM05D007187 ORTHO05D009219 1.6e-73 280.4 255 61.6
RcHm_v2.0_Chr7g0177701 Rosa chinensis HOM05D007187 ORTHO05D009219 2.1e-73 280.0 279 55.6
FvH4_5g17910 Fragaria vesca HOM05D007187 ORTHO05D009219 3.6e-73 279.3 279 55.2
GSVIVG01000394001 Vitis vinifera HOM05D007187 ORTHO05D009219 3.6e-73 279.3 279 57.7
Atru.chr9.1590 Acer truncatum HOM05D007187 ORTHO05D009219 1.2e-71 274.2 303 52.5
PGR083G1346 Punica granatum HOM05D007187 ORTHO05D009219 1.5e-71 273.9 263 57.4
Eucgr.H00587 Eucalyptus grandis HOM05D007187 ORTHO05D009219 2.6e-71 273.1 263 59.3
PSO782G3824 Papaver somniferum HOM05D007187 ORTHO05D009219 2.6e-71 273.1 244 59.4
ClCG04G010390 Citrullus lanatus HOM05D007187 ORTHO05D009219 3.4e-71 272.7 254 57.5
QL10p033296 Quercus lobata HOM05D007187 ORTHO05D009219 4.4e-71 272.3 296 54.1
QL93p0156_0017 Quercus lobata HOM05D007187 ORTHO05D009219 4.4e-71 272.3 296 54.1
Sed0020940 Sechium edule HOM05D007187 ORTHO05D009219 4.4e-71 272.3 254 57.9
MD06G1234700 Malus domestica HOM05D007187 ORTHO05D009219 5.8e-71 271.9 278 54.3
Ciclev10020853m.g Citrus clementina HOM05D007187 ORTHO05D009219 7.6e-71 271.6 274 55.8
TAR629G1287 Trochodendron aralioides HOM05D007187 ORTHO05D009219 7.6e-71 271.6 281 57.3
FAN13G0144 Fragaria x ananassa HOM05D007187 ORTHO05D009219 9.9e-71 271.2 301 51.8
Hma1.2p1_0471F.1_g159290 Hydrangea macrophylla HOM05D007187 ORTHO05D009219 9.9e-71 271.2 254 58.7
MELO3C002156.2 Cucumis melo HOM05D007187 ORTHO05D009219 1.1e-69 267.7 267 55.1
CiPaw.15G149500 Carya illinoinensis HOM05D007187 ORTHO05D009219 1.9e-69 266.9 253 58.9
Rhsim08G0113600 Rhododendron simsii HOM05D007187 ORTHO05D009219 1.9e-69 266.9 290 53.8
Aqoxy3G04047 Aquilegia oxysepala HOM05D007187 ORTHO05D009219 3.2e-69 266.2 273 54.6
ATR0598G346 Amborella trichopoda HOM05D007187 ORTHO05D009219 4.2e-69 265.8 277 55.6
Dinv19316 Davidia involucrata HOM05D007187 ORTHO05D009219 7.1e-69 265.0 284 54.2
CsaV3_1G007400 Cucumis sativus L. HOM05D007187 ORTHO05D009219 3.5e-68 262.7 252 56.0
Nn4g24583 Nelumbo nucifera HOM05D007187 ORTHO05D009219 3.5e-68 262.7 260 57.3
Aa31LG4G3710 Aethionema arabicum HOM05D007187 ORTHO05D009219 4.6e-68 262.3 282 54.6
Peaxi162Scf00171g00732 Petunia axillaris HOM05D007187 ORTHO05D009219 6.0e-68 261.9 285 54.4
AT1G73470 Arabidopsis thaliana HOM05D007187 ORTHO05D009219 2.3e-67 260.0 274 53.3
A02p18740 Brassica napus HOM05D007187 ORTHO05D009219 2.3e-67 260.0 310 50.3
Lalb_Chr16g0386871 Lupinus albus HOM05D007187 ORTHO05D009219 2.3e-67 260.0 264 55.3
Manes.14G173900 Manihot esculenta HOM05D007187 ORTHO05D009219 3.0e-67 259.6 292 52.7
Thhalv10018766m.g Eutrema salsugineum HOM05D007187 ORTHO05D009219 3.9e-67 259.2 264 54.9
Nitab4.5_0000936g0080 Nicotiana tabacum HOM05D007187 ORTHO05D009219 6.6e-67 258.5 326 50.3
Carub.0002s2020 Capsella rubella HOM05D007187 ORTHO05D009219 1.1e-66 257.7 282 53.5
C02p31110 Brassica napus HOM05D007187 ORTHO05D009219 1.5e-66 257.3 309 49.5
Gohir.D07G065800 Gossypium hirsutum HOM05D007187 ORTHO05D009219 1.5e-66 257.3 265 54.0
Gorai.001G069400 Gossypium raimondii HOM05D007187 ORTHO05D009219 1.5e-66 257.3 265 54.0
Sp5g28650 Schrenkiella parvula HOM05D007187 ORTHO05D009219 2.5e-66 256.5 264 55.3
Thecc.03G067300 Theobroma cacao HOM05D007187 ORTHO05D009219 2.5e-66 256.5 252 55.2
AL2G33240 Arabidopsis lyrata HOM05D007187 ORTHO05D009219 3.3e-66 256.1 274 53.6
BolC2t09155H Brassica oleracea HOM05D007187 ORTHO05D009219 4.3e-66 255.8 309 49.2
Gohir.A07G061100 Gossypium hirsutum HOM05D007187 ORTHO05D009219 4.3e-66 255.8 265 53.6
Lj5C164T17 Lonicera japonica HOM05D007187 ORTHO05D009219 9.6e-66 254.6 263 53.6
Glyma.08G057000 Glycine max HOM05D007187 ORTHO05D009219 2.8e-65 253.1 244 57.0
Nitab4.5_0004454g0040 Nicotiana tabacum HOM05D007187 ORTHO05D009219 2.8e-65 253.1 326 49.4
Migut.O00232 Erythranthe guttata HOM05D007187 ORTHO05D009219 3.6e-65 252.7 253 57.7
Solyc03g098110.4 Solanum lycopersicum HOM05D007187 ORTHO05D009219 3.6e-65 252.7 323 49.5
arahy.Tifrunner.gnm1.ann1.RE1P9T Arachis hypogaea HOM05D007187 ORTHO05D009219 6.2e-65 251.9 290 51.0
CAN.G637.26 Capsicum annuum HOM05D007187 ORTHO05D009219 6.2e-65 251.9 284 54.2
DCAR_014735 Daucus carota HOM05D007187 ORTHO05D009219 6.2e-65 251.9 258 55.0
Prupe.5G239500 Prunus persica HOM05D007187 ORTHO05D009219 6.2e-65 251.9 278 53.2
Sabra15G0027300 Salix brachista HOM05D007187 ORTHO05D009219 6.2e-65 251.9 329 47.1
Sopen03g028810 Solanum pennellii HOM05D007187 ORTHO05D009219 8.1e-65 251.5 284 53.5
SalBow5G2942 Salvia bowleyana HOM05D007187 ORTHO05D009219 1.8e-64 250.4 251 54.6
ECA238G2937 Erigeron canadensis HOM05D007187 ORTHO05D009219 2.4e-64 250.0 267 54.7
PGSC0003DMG400031050 Solanum tuberosum HOM05D007187 ORTHO05D009219 4.0e-64 249.2 284 53.5
Hma1.2p1_0471F.1_g159280 Hydrangea macrophylla HOM05D007187 ORTHO05D009219 6.9e-64 248.4 232 59.5
MSTRG.11527 Avicennia marina HOM05D007187 ORTHO05D009219 9.0e-64 248.1 281 53.7
Lsat_1_v5_gn_2_15080 Lactuca sativa HOM05D007187 ORTHO05D009219 1.2e-63 247.7 246 56.5
arahy.Tifrunner.gnm1.ann1.ZBK6XN Arachis hypogaea HOM05D007187 ORTHO05D009219 1.5e-63 247.3 289 50.9
HanXRQChr01g0002671 Helianthus annuus HOM05D007187 ORTHO05D009219 1.5e-63 247.3 265 53.6
Cc04_g09730 Coffea canephora HOM05D007187 ORTHO05D009219 3.4e-63 246.1 254 55.5
LjContig00484g0006565 Lotus japonicus HOM05D007187 ORTHO05D009219 7.6e-63 245.0 252 55.2
HPP92_026739 Vanilla planifolia HOM05D007187 ORTHO05D009219 1.7e-62 243.8 262 52.3
Hund22370 Selenicereus undatus HOM05D007187 ORTHO05D009219 2.2e-62 243.4 334 49.7
HPP92_016177 Vanilla planifolia HOM05D007187 ORTHO05D009219 3.8e-62 242.7 262 51.9
VMungo0251G3256 Vigna mungo HOM05D007187 ORTHO05D009219 3.8e-62 242.7 250 55.6
Ca_17169_v3 Cicer arietinum L. HOM05D005071 ORTHO05D006069 1.9e-61 240.4 246 54.1
Actinidia34651 Actinidia chinensis HOM05D007187 ORTHO05D009219 3.2e-61 239.6 255 52.5
Nitab4.5_0000021g0400 Nicotiana tabacum HOM05D007187 ORTHO05D009219 5.4e-61 238.8 243 57.2
BraA02t06916Z Brassica rapa HOM05D007187 ORTHO05D009219 1.2e-60 237.7 329 46.8
Phvul.002G332600 Phaseolus vulgaris HOM05D007187 ORTHO05D009219 6.0e-60 235.3 250 54.4
TWI15G0155 Tripterygium wilfordii HOM05D007187 ORTHO05D009219 3.9e-59 232.6 320 45.3
TPR.G1397 Trifolium pratense HOM05D007187 ORTHO05D009219 5.6e-58 228.8 261 51.0
EL10Ac8g19490 Beta vulgaris HOM05D007187 ORTHO05D009219 8.1e-57 224.9 315 48.9
MD14G1241900 Malus domestica HOM05D007187 ORTHO05D009219 3.8e-54 216.1 252 52.8
SEGI_30595 Sequoiadendron giganteum HOM05D007187 ORTHO05D009219 1.6e-52 210.7 244 50.0
Potri.015G033200 Populus trichocarpa HOM05D007187 ORTHO05D009219 2.1e-52 210.3 222 54.1
SGA_v2.0_scaffold90G27781 Striga asiatica HOM05D007187 ORTHO05D009219 7.4e-50 201.8 326 42.3
Cpa.g.sc7.111 Carica papaya HOM05D007187 ORTHO05D009219 6.2e-49 198.7 127 77.2
FAN08G2087 Fragaria x ananassa HOM05D007187 ORTHO05D009219 2.4e-48 196.8 148 66.9
FAN18G0372 Fragaria x ananassa HOM05D007187 ORTHO05D009219 5.3e-48 195.7 148 66.2
Psat7g000640 Pisum sativum HOM05D007187 ORTHO05D009219 6.9e-48 195.3 232 49.1
Pp3c24_15180 Physcomitrium patens HOM05D007187 ORTHO05D009219 3.4e-47 193.0 334 37.7
CARHR066500 Cardamine hirsuta HOM05D007187 ORTHO05D009219 9.3e-45 184.9 165 60.6
Haze_18954 Corylus avellana HOM05D007187 ORTHO05D009219 4.6e-44 182.6 264 45.1
SMO137G0317 Selaginella moellendorffii HOM05D007187 ORTHO05D009219 3.3e-42 176.4 324 37.7
AagrBONN_evm.TU.Sc2ySwM_228.159 Anthoceros agrestis HOM05D007187 ORTHO05D009219 1.6e-41 174.1 256 40.6
Mapoly0047s0078 Marchantia polymorpha HOM05D007187 ORTHO05D009219 1.4e-40 171.0 254 42.1
CBR_g23710 Chara braunii HOM05D000019 ORTHO05D000002 4.2e-37 159.5 325 34.2
Zm00001eb314540 Zea mays HOM05D007187 ORTHO05D009219 1.6e-36 157.5 236 42.4
Os09g0448900 Oryza sativa ssp. japonica HOM05D007187 ORTHO05D009219 1.1e-34 151.4 139 57.6
vmacro17853 Vaccinium macrocarpon HOM05D007187 ORTHO05D009219 6.3e-33 145.6 261 39.5
Ah.14g085920 Amaranthus hybridus HOM05D005606 ORTHO05D001302 5.0e-30 136.0 136 57.4
CDE11G1050 Ceratophyllum demersum HOM05D007187 ORTHO05D009219 6.5e-30 135.6 101 68.3
SMO134G0127 Selaginella moellendorffii HOM05D007187 ORTHO05D009219 1.9e-29 134.0 204 40.7
FAN08G0101 Fragaria x ananassa HOM05D007187 ORTHO05D009219 2.8e-25 120.2 180 40.0
MSTRG.10866 Avicennia marina HOM05D007187 ORTHO05D009219 5.0e-14 82.8 100 51.0
Cre09.g407450 Chlamydomonas reinhardtii HOM05D007187 ORTHO05D009219 4.7e-12 76.3 114 39.5
Cpa.g.sc7.112 Carica papaya HOM05D007187 ORTHO05D009219 7.0e-08 62.4 56 58.9
PRCOL_00002241 Prasinoderma coloniale HOM05D007187 ORTHO05D009219 4.5e-07 59.7 110 35.5
MSTRG.10865 Avicennia marina HOM05D007187 ORTHO05D009219 7.7e-07 58.9 64 50.0


User provided reference genes

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