Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 6.3e-137 490.7 243 100.0
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 5.6e-77 291.6 227 69.6
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 2.8e-76 289.3 229 69.9
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 6.9e-75 284.6 227 68.3
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 2.6e-74 282.7 229 65.1
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 8.4e-73 277.7 231 62.3
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 2.5e-72 276.2 235 64.7
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 3.2e-72 275.8 231 62.3
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 5.5e-72 275.0 230 62.2
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 7.9e-71 271.2 230 63.5
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 5.1e-70 268.5 229 63.3
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 5.1e-70 268.5 232 64.2
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 1.1e-69 267.3 227 63.9
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 1.9e-69 266.5 232 65.1
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 1.9e-69 266.5 235 64.3
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 9.7e-69 264.2 232 62.1
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 1.6e-68 263.5 229 62.4
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 4.8e-68 261.9 239 61.5
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 8.2e-68 261.2 211 66.4
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 1.8e-67 260.0 236 63.1
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 3.1e-67 259.2 232 62.9
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 4.1e-67 258.8 234 62.4
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 4.1e-67 258.8 240 62.1
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 9.0e-67 257.7 231 59.3
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 1.5e-66 256.9 169 75.7
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 2.0e-66 256.5 161 79.5
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 2.0e-66 256.5 195 69.7
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 2.6e-66 256.1 191 71.7
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 7.7e-66 254.6 172 76.2
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 7.7e-66 254.6 231 61.9
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 1.0e-65 254.2 231 61.0
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 1.0e-65 254.2 239 60.3
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 1.3e-65 253.8 195 69.7
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 1.3e-65 253.8 230 62.2
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 2.2e-65 253.1 196 69.9
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 3.8e-65 252.3 231 61.5
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 1.1e-64 250.8 179 72.1
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 1.1e-64 250.8 173 72.3
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 1.4e-64 250.4 228 61.4
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 1.9e-64 250.0 234 59.4
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 2.5e-64 249.6 173 72.3
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 2.5e-64 249.6 172 74.4
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 3.2e-64 249.2 199 67.3
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 4.2e-64 248.8 135 88.1
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 4.2e-64 248.8 135 88.1
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 4.2e-64 248.8 230 61.3
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 7.2e-64 248.1 192 66.7
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 9.4e-64 247.7 161 77.0
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 1.2e-63 247.3 135 87.4
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 1.6e-63 246.9 198 67.2
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 2.1e-63 246.5 229 60.3
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 4.6e-63 245.4 229 59.0
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 1.8e-62 243.4 236 60.2
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 3.0e-62 242.7 241 58.1
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 3.0e-62 242.7 250 58.0
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 6.7e-62 241.5 227 58.6
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 8.8e-62 241.1 129 89.1
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.5e-61 240.4 167 74.3
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.5e-61 240.4 167 74.3
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 2.0e-61 240.0 177 70.1
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 5.7e-61 238.4 165 73.9
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 7.4e-61 238.0 200 64.5
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 9.7e-61 237.7 197 66.0
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 9.7e-61 237.7 197 66.0
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 1.3e-60 237.3 229 59.4
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 2.8e-60 236.1 173 69.4
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 3.7e-60 235.7 169 69.2
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 3.7e-60 235.7 200 64.5
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 4.8e-60 235.3 200 63.5
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 4.8e-60 235.3 180 66.1
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 8.2e-60 234.6 128 83.6
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 8.2e-60 234.6 188 67.0
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 1.8e-59 233.4 156 75.6
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 5.3e-59 231.9 201 63.7
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 9.1e-59 231.1 234 56.8
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 1.2e-58 230.7 228 57.0
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 3.4e-58 229.2 152 75.0
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 1.0e-57 227.6 155 74.2
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 1.0e-57 227.6 155 74.2
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 2.9e-57 226.1 125 84.8
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 1.9e-56 223.4 218 59.2
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 7.2e-56 221.5 126 82.5
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 3.6e-55 219.2 149 75.8
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 1.1e-53 214.2 211 59.2
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 3.3e-53 212.6 235 54.9
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 9.7e-53 211.1 204 59.8
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 3.7e-52 209.1 155 67.1
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 7.0e-51 204.9 153 66.0
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 7.0e-51 204.9 125 77.6
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 9.1e-51 204.5 154 66.9
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 3.8e-49 199.1 145 71.7
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 8.5e-49 198.0 213 54.0
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 5.5e-48 195.3 153 65.4
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 7.2e-48 194.9 128 75.0
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 3.9e-46 189.1 172 55.2
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 8.0e-39 164.9 228 46.9
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.7e-36 157.1 155 55.5
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 9.1e-35 151.4 130 63.8
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 1.2e-34 151.0 139 53.2
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 1.2e-34 151.0 188 49.5
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 6.3e-28 128.6 178 44.9
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.8e-22 110.5 56 91.1
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 1.5e-21 107.5 84 67.9
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 7.5e-21 105.1 61 77.0
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 4.9e-20 102.4 132 47.7
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 1.5e-16 90.9 67 67.2
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 5.6e-16 89.0 200 33.0
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 1.2e-13 81.3 116 34.5
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 6.4e-12 75.5 45 84.4
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 5.4e-11 72.4 45 82.2
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 1.0e-09 68.2 101 35.6
MCO11G252 Micromonas commoda HOM05D061291 ORTHO05D034487 5.2e-06 55.8 148 31.1


User provided reference genes

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