Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc10g0007370 Simmondsia chinensis HOM05D006908 ORTHO05D008662 1.4e-195 686.0 340 100.0
Dinv38042 Davidia involucrata HOM05D006908 ORTHO05D008662 1.9e-115 419.9 334 62.3
QL05p023344 Quercus lobata HOM05D006908 ORTHO05D008662 2.2e-111 406.4 336 61.3
Haze_16403 Corylus avellana HOM05D006908 ORTHO05D008662 3.8e-111 405.6 333 60.4
Hma1.2p1_0323F.1_g125120 Hydrangea macrophylla HOM05D006908 ORTHO05D008662 2.4e-110 402.9 332 59.9
CiPaw.01G238600 Carya illinoinensis HOM05D006908 ORTHO05D008662 4.2e-110 402.1 334 60.2
Lj5C59T9 Lonicera japonica HOM05D006908 ORTHO05D008662 4.2e-110 402.1 327 62.1
Sabra01G0145800 Salix brachista HOM05D006908 ORTHO05D008662 5.1e-108 395.2 339 60.8
Actinidia01807 Actinidia chinensis HOM05D006908 ORTHO05D008662 6.6e-108 394.8 333 59.2
EL10Ac9g22006 Beta vulgaris HOM05D006908 ORTHO05D008662 1.1e-107 394.0 333 61.6
Hund06614 Selenicereus undatus HOM05D006908 ORTHO05D008662 1.5e-107 393.7 330 63.0
Nn8g39204 Nelumbo nucifera HOM05D006908 ORTHO05D008662 5.6e-107 391.7 338 61.2
MD17G1194300 Malus domestica HOM05D006908 ORTHO05D008662 7.3e-107 391.3 337 59.3
GSVIVG01017098001 Vitis vinifera HOM05D006908 ORTHO05D008662 1.3e-106 390.6 337 58.8
FAN09G3067 Fragaria x ananassa HOM05D006908 ORTHO05D008662 3.6e-106 389.0 335 58.8
Atru.chr1.3281 Acer truncatum HOM05D006908 ORTHO05D008662 4.8e-106 388.7 335 58.2
Rhsim08G0222000 Rhododendron simsii HOM05D006908 ORTHO05D008662 1.8e-105 386.7 351 57.3
PSO782G4818 Papaver somniferum HOM05D006908 ORTHO05D008662 1.2e-104 384.0 331 58.3
Thecc.06G089400 Theobroma cacao HOM05D006908 ORTHO05D008662 2.0e-104 383.3 331 58.3
PGSC0003DMG400005687 Solanum tuberosum HOM05D006908 ORTHO05D008662 1.7e-103 380.2 333 58.9
TAR626G0624 Trochodendron aralioides HOM05D006908 ORTHO05D008662 1.7e-103 380.2 359 57.1
Nitab4.5_0002308g0060 Nicotiana tabacum HOM05D006908 ORTHO05D008662 2.9e-103 379.4 331 60.1
COL.COLO4_30388 Corchorus olitorius HOM05D006908 ORTHO05D008662 3.8e-103 379.0 335 57.0
FAN05G1986 Fragaria x ananassa HOM05D006908 ORTHO05D008662 3.8e-103 379.0 338 57.4
DCAR_023055 Daucus carota HOM05D006908 ORTHO05D008662 4.9e-103 378.6 336 56.8
FvH4_6g31280 Fragaria vesca HOM05D006908 ORTHO05D008662 6.4e-103 378.3 331 58.3
Ah.01g005440 Amaranthus hybridus HOM05D006908 ORTHO05D008662 8.4e-103 377.9 328 59.8
vmacro18903 Vaccinium macrocarpon HOM05D006908 ORTHO05D008662 1.1e-102 377.5 389 53.0
RcHm_v2.0_Chr2g0138011 Rosa chinensis HOM05D006908 ORTHO05D008662 1.4e-102 377.1 340 56.8
Prupe.3G070300 Prunus persica HOM05D006908 ORTHO05D008662 5.4e-102 375.2 337 57.9
AUR62042927 Chenopodium quinoa HOM05D006908 ORTHO05D008662 1.6e-101 373.6 357 57.4
CAN.G438.72 Capsicum annuum HOM05D006908 ORTHO05D008662 2.7e-101 372.9 329 60.2
Duzib160G0703 Durio zibethinus HOM05D006908 ORTHO05D008662 2.7e-101 372.9 334 57.2
Gorai.006G098400 Gossypium raimondii HOM05D006908 ORTHO05D008662 3.5e-101 372.5 334 56.3
Medtr2g102040 Medicago truncatula HOM05D006908 ORTHO05D008662 7.9e-101 371.3 341 55.4
Sopen03g039000 Solanum pennellii HOM05D006908 ORTHO05D008662 1.0e-100 370.9 332 57.2
HanXRQChr02g0032801 Helianthus annuus HOM05D006908 ORTHO05D008662 1.7e-100 370.2 334 58.1
Lj3g0017668 Lotus japonicus HOM05D006908 ORTHO05D008662 6.6e-100 368.2 342 57.0
Oeu063957.2 Olea europaea HOM05D006908 ORTHO05D008662 4.3e-99 365.5 321 57.3
Ciclev10025928m.g Citrus clementina HOM05D006908 ORTHO05D008662 1.3e-98 364.0 353 55.5
ECA247G1365 Erigeron canadensis HOM05D006908 ORTHO05D008662 1.3e-98 364.0 333 57.4
PSO063G2605 Papaver somniferum HOM05D006908 ORTHO05D008662 2.1e-98 363.2 337 56.1
Manes.11G045900 Manihot esculenta HOM05D006908 ORTHO05D008662 3.6e-98 362.5 335 56.7
MSTRG.11073 Avicennia marina HOM05D006908 ORTHO05D008662 1.4e-97 360.5 337 54.9
SalBow2G2262 Salvia bowleyana HOM05D006908 ORTHO05D008662 1.8e-97 360.1 336 55.7
ClCG07G013040 Citrullus lanatus HOM05D006908 ORTHO05D008662 3.1e-97 359.4 341 54.8
Sed0021689 Sechium edule HOM05D006908 ORTHO05D008662 4.0e-97 359.0 342 55.3
Cc04_g03340 Coffea canephora HOM05D006908 ORTHO05D008662 6.9e-97 358.2 332 57.5
PGR102G2040 Punica granatum HOM05D006908 ORTHO05D008662 6.9e-97 358.2 329 56.2
CsaV3_3G025130 Cucumis sativus L. HOM05D006908 ORTHO05D008662 9.0e-97 357.8 341 53.7
MELO3C012958.2 Cucumis melo HOM05D006908 ORTHO05D008662 2.6e-96 356.3 341 53.7
Lalb_Chr22g0351301 Lupinus albus HOM05D006908 ORTHO05D008662 9.9e-96 354.4 332 56.0
Phvul.005G170700 Phaseolus vulgaris HOM05D006908 ORTHO05D008662 9.9e-96 354.4 351 54.4
Migut.I00872 Erythranthe guttata HOM05D006908 ORTHO05D008662 1.3e-95 354.0 334 56.9
CSS0010187 Camellia sinensis var. sinensis HOM05D006908 ORTHO05D008662 2.9e-95 352.8 293 60.1
Ca_01120_v3 Cicer arietinum L. HOM05D006908 ORTHO05D008662 6.4e-95 351.7 338 53.6
TPR.G37174 Trifolium pratense HOM05D006908 ORTHO05D008662 6.4e-95 351.7 339 53.1
Solyc03g120130.4 Solanum lycopersicum HOM05D006908 ORTHO05D008662 2.1e-93 346.7 334 54.8
VMungo1080G1808 Vigna mungo HOM05D006908 ORTHO05D008662 6.0e-93 345.1 338 53.0
CANSAT56G3342 Cannabis sativa HOM05D006908 ORTHO05D008662 7.9e-93 344.7 330 53.9
Eucgr.J02986 Eucalyptus grandis HOM05D006908 ORTHO05D008662 1.3e-92 344.0 329 55.0
Glyma.15G014900 Glycine max HOM05D006908 ORTHO05D008662 3.0e-92 342.8 340 52.4
HPP92_003725 Vanilla planifolia HOM05D006908 ORTHO05D008662 3.9e-92 342.4 330 53.0
CDE02G0011 Ceratophyllum demersum HOM05D006908 ORTHO05D008662 6.7e-92 341.7 329 54.4
arahy.Tifrunner.gnm1.ann1.0IDI1A Arachis hypogaea HOM05D006908 ORTHO05D008662 9.6e-91 337.8 338 51.5
arahy.Tifrunner.gnm1.ann1.UK934I Arachis hypogaea HOM05D006908 ORTHO05D008662 9.6e-91 337.8 338 51.5
Gohir.D09G082700 Gossypium hirsutum HOM05D006908 ORTHO05D008662 8.1e-90 334.7 334 53.0
Potri.001G181200 Populus trichocarpa HOM05D006908 ORTHO05D008662 1.5e-88 330.5 290 60.3
Zm00001eb275430 Zea mays HOM05D006908 ORTHO05D008662 2.6e-88 329.7 336 53.3
Nitab4.5_0000671g0150 Nicotiana tabacum HOM05D006908 ORTHO05D008662 4.5e-88 328.9 332 54.5
Psat5g298720 Pisum sativum HOM05D006908 ORTHO05D008662 4.9e-87 325.5 299 54.2
Os06g0639300 Oryza sativa ssp. japonica HOM05D006908 ORTHO05D008662 1.9e-86 323.6 332 52.4
TWI75G1463 Tripterygium wilfordii HOM05D006908 ORTHO05D008662 4.2e-86 322.4 334 52.1
Sp5g35850 Schrenkiella parvula HOM05D006908 ORTHO05D008662 3.5e-85 319.3 332 49.4
AUR62016450 Chenopodium quinoa HOM05D006908 ORTHO05D008662 7.9e-85 318.2 305 57.4
Aqoxy7G01689 Aquilegia oxysepala HOM05D006908 ORTHO05D008662 3.0e-84 316.2 342 52.9
Gohir.A09G082800 Gossypium hirsutum HOM05D006908 ORTHO05D008662 3.0e-84 316.2 337 50.4
THA.LOC104812520 Tarenaya hassleriana HOM05D006908 ORTHO05D008662 3.0e-84 316.2 347 49.6
unitig_52.g17450 Utricularia gibba HOM05D006908 ORTHO05D008662 1.5e-83 313.9 331 50.2
Peaxi162Scf00015g00453 Petunia axillaris HOM05D006908 ORTHO05D008662 5.7e-83 312.0 328 52.1
Aa31LG4G230 Aethionema arabicum HOM05D006908 ORTHO05D008662 4.8e-82 308.9 364 47.5
SEGI_13943 Sequoiadendron giganteum HOM05D006908 ORTHO05D008662 4.1e-81 305.8 350 47.4
Hma1.2p1_0323F.1_g125130 Hydrangea macrophylla HOM05D006908 ORTHO05D008662 9.0e-81 304.7 332 49.7
AT1G79915 Arabidopsis thaliana HOM05D006908 ORTHO05D008662 1.0e-79 301.2 337 48.4
Thhalv10018901m.g Eutrema salsugineum HOM05D006908 ORTHO05D008662 1.0e-79 301.2 342 47.7
BcaC08g47561 Brassica carinata HOM05D006908 ORTHO05D008662 9.3e-78 294.7 336 46.4
Carub.0002s2758 Capsella rubella HOM05D006908 ORTHO05D008662 9.3e-78 294.7 338 47.0
BcaC08g47592 Brassica carinata HOM05D002960 ORTHO05D003632 1.2e-77 294.3 339 47.2
CARHR074570 Cardamine hirsuta HOM05D006908 ORTHO05D008662 7.9e-77 291.6 340 46.8
Cfa002075 Carpinus fangiana HOM05D006908 ORTHO05D008662 7.9e-77 291.6 253 58.1
BolC6t40444H Brassica oleracea HOM05D002960 ORTHO05D003632 2.4e-73 280.0 365 43.8
C06p54330 Brassica napus HOM05D002960 ORTHO05D003632 3.1e-73 279.6 364 44.0
ATR0602G186 Amborella trichopoda HOM05D006908 ORTHO05D008662 6.9e-73 278.5 244 57.0
SHI10939 Sapria himalayana HOM05D006908 ORTHO05D008662 4.5e-72 275.8 245 57.1
Mapoly0072s0004 Marchantia polymorpha HOM05D006908 ORTHO05D008662 5.5e-70 268.9 343 43.1
BraA07t32051Z Brassica rapa HOM05D006908 ORTHO05D008662 2.1e-69 266.9 345 43.2
Cpa.g.sc0.185 Carica papaya HOM05D006908 ORTHO05D008662 8.8e-68 261.5 213 60.6
MBI15_g13424_MAGBIO Magnolia biondii HOM05D006908 ORTHO05D008662 1.1e-67 261.2 266 53.4
AUR62033073 Chenopodium quinoa HOM05D006908 ORTHO05D008662 2.5e-67 260.0 297 51.2
CSS0029579 Camellia sinensis var. sinensis HOM05D006908 ORTHO05D008662 1.8e-60 237.3 181 64.6
AagrBONN_evm.TU.Sc2ySwM_344.5185 Anthoceros agrestis HOM05D006908 ORTHO05D008662 1.1e-59 234.6 337 41.5
Lsat_1_v5_gn_1_35121 Lactuca sativa HOM05D006908 ORTHO05D008662 5.7e-59 232.3 219 54.8
A07p45490 Brassica napus HOM05D006908 ORTHO05D008662 9.7e-59 231.5 393 36.6
Pp3c16_8290 Physcomitrium patens HOM05D006908 ORTHO05D008662 8.2e-58 228.4 358 38.3
CBR_g20274 Chara braunii HOM05D006908 ORTHO05D008662 6.5e-55 218.8 310 39.0
BcaC04g22058 Brassica carinata HOM05D006908 ORTHO05D008662 1.4e-44 184.5 346 36.4
FAN02G3381 Fragaria x ananassa HOM05D006908 ORTHO05D008662 2.3e-44 183.7 229 46.7
C09p24020 Brassica napus HOM05D006908 ORTHO05D008662 3.1e-33 146.7 186 42.5
SGA_v2.0_scaffold37G14828 Striga asiatica HOM05D006908 ORTHO05D008662 1.2e-29 134.8 155 49.7
SMO347G0515 Selaginella moellendorffii HOM05D006908 ORTHO05D008662 2.1e-29 134.0 202 39.6
Cpa.g.sc41.12 Carica papaya HOM05D006908 ORTHO05D008662 1.5e-22 111.3 85 63.5
BolC9t55322H Brassica oleracea HOM05D006908 ORTHO05D008662 4.7e-21 106.3 87 55.2
AL2G41640 Arabidopsis lyrata HOM05D006908 ORTHO05D008662 2.0e-19 100.9 149 39.6
Actinidia32749 Actinidia chinensis HOM05D006908 ORTHO05D008662 2.2e-18 97.4 107 50.5
FAN14G1268 Fragaria x ananassa HOM05D006908 ORTHO05D008662 2.3e-07 60.8 79 44.3


User provided reference genes

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