Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc10g0007210 Simmondsia chinensis HOM05D008072 ORTHO05D010204 2.3e-57 225.3 111 100.0
Dinv37992 Davidia involucrata HOM05D008072 ORTHO05D010204 2.1e-18 95.9 113 50.4
QL05p020523 Quercus lobata HOM05D008072 ORTHO05D010204 1.1e-16 90.1 111 47.7
EL10Ac9g22100 Beta vulgaris HOM05D008072 ORTHO05D010204 7.4e-16 87.4 116 46.6
Potri.001G188400 Populus trichocarpa HOM05D008072 ORTHO05D010204 7.4e-16 87.4 115 47.0
Aqoxy7G01464 Aquilegia oxysepala HOM05D008072 ORTHO05D010204 2.8e-15 85.5 112 42.0
Rhsim12G0202400 Rhododendron simsii HOM05D008072 ORTHO05D010204 1.8e-14 82.8 112 44.6
Peaxi162Scf00038g00843 Petunia axillaris HOM05D008072 ORTHO05D010204 3.1e-14 82.0 118 44.1
PGR102G0255 Punica granatum HOM05D008072 ORTHO05D010204 1.2e-13 80.1 120 43.3
Atru.chr1.3499 Acer truncatum HOM05D008072 ORTHO05D010204 2.6e-13 79.0 124 40.3
MD17G1186400 Malus domestica HOM05D008072 ORTHO05D010204 7.6e-13 77.4 117 43.6
GSVIVG01017012001 Vitis vinifera HOM05D008072 ORTHO05D010204 7.6e-13 77.4 113 46.0
Oeu060494.1 Olea europaea HOM05D008072 ORTHO05D010204 1.0e-12 77.0 115 42.6
CSS0040470 Camellia sinensis var. sinensis HOM05D008072 ORTHO05D010204 2.2e-12 75.9 119 42.9
FAN02G2294 Fragaria x ananassa HOM05D008072 ORTHO05D010204 5.0e-12 74.7 113 43.4
Manes.04G132700 Manihot esculenta HOM05D008072 ORTHO05D010204 5.0e-12 74.7 114 45.6
Prupe.3G061100 Prunus persica HOM05D008072 ORTHO05D010204 6.5e-12 74.3 113 42.5
Nn2g11609 Nelumbo nucifera HOM05D008072 ORTHO05D010204 8.5e-12 73.9 114 43.0
TAR626G1017 Trochodendron aralioides HOM05D008072 ORTHO05D010204 8.5e-12 73.9 108 42.6
Ciclev10026797m.g Citrus clementina HOM05D008072 ORTHO05D010204 1.1e-11 73.6 123 39.0
Actinidia09003 Actinidia chinensis HOM05D008072 ORTHO05D010204 1.9e-11 72.8 112 41.1
FAN05G4246 Fragaria x ananassa HOM05D008072 ORTHO05D010204 2.5e-11 72.4 113 41.6
Sabra01G0152600 Salix brachista HOM05D008072 ORTHO05D010204 2.5e-11 72.4 116 43.1
TPR.G35014 Trifolium pratense HOM05D008072 ORTHO05D010204 2.5e-11 72.4 114 41.2
FvH4_6g32180 Fragaria vesca HOM05D008072 ORTHO05D010204 4.2e-11 71.6 114 42.1
Hma1.2p1_3269F.1_g334750 Hydrangea macrophylla HOM05D008072 ORTHO05D010204 7.2e-11 70.9 114 40.4
Hund06655 Selenicereus undatus HOM05D008072 ORTHO05D010204 7.2e-11 70.9 106 41.5
Thecc.06G097600 Theobroma cacao HOM05D008072 ORTHO05D010204 7.2e-11 70.9 119 41.2
FAN14G4057 Fragaria x ananassa HOM05D008072 ORTHO05D010204 9.4e-11 70.5 115 42.6
Lalb_Chr04g0262911 Lupinus albus HOM05D008072 ORTHO05D010204 9.4e-11 70.5 112 41.1
FAN09G3706 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.2e-10 70.1 113 41.6
Hund31378 Selenicereus undatus HOM05D008072 ORTHO05D010204 1.2e-10 70.1 106 41.5
Medtr8g013930 Medicago truncatula HOM05D008072 ORTHO05D010204 2.1e-10 69.3 111 37.8
Phvul.010G146400 Phaseolus vulgaris HOM05D008072 ORTHO05D010204 2.1e-10 69.3 111 39.6
RcHm_v2.0_Chr2g0140071 Rosa chinensis HOM05D008072 ORTHO05D010204 2.1e-10 69.3 114 41.2
Cc04_g02690 Coffea canephora HOM05D008072 ORTHO05D010204 4.6e-10 68.2 118 36.4
Lj3g0001751 Lotus japonicus HOM05D008072 ORTHO05D010204 4.6e-10 68.2 113 44.2
AUR62031887 Chenopodium quinoa HOM05D008072 ORTHO05D010204 6.1e-10 67.8 118 40.7
Glyma.07G016900 Glycine max HOM05D008072 ORTHO05D010204 6.1e-10 67.8 111 41.4
Sopen03g039710 Solanum pennellii HOM05D008072 ORTHO05D010204 6.1e-10 67.8 120 40.0
VMungo0331G2041 Vigna mungo HOM05D008072 ORTHO05D010204 6.1e-10 67.8 111 40.5
HanXRQChr16g0501221 Helianthus annuus HOM05D008072 ORTHO05D010204 7.9e-10 67.4 117 39.3
TWI18G1284 Tripterygium wilfordii HOM05D008072 ORTHO05D010204 1.0e-09 67.0 123 41.5
Duzib192G0771 Durio zibethinus HOM05D008072 ORTHO05D010204 1.8e-09 66.2 119 38.7
Sed0011388 Sechium edule HOM05D008072 ORTHO05D010204 1.8e-09 66.2 111 38.7
SalBow7G3462 Salvia bowleyana HOM05D008072 ORTHO05D010204 3.0e-09 65.5 119 37.8
ClCG09G000070 Citrullus lanatus HOM05D008072 ORTHO05D010204 3.9e-09 65.1 111 40.5
Gorai.003G063000 Gossypium raimondii HOM05D008072 ORTHO05D010204 6.7e-09 64.3 99 44.4
Psat4g197480 Pisum sativum HOM05D008072 ORTHO05D010204 6.7e-09 64.3 112 40.2
Gohir.D03G059100 Gossypium hirsutum HOM05D008072 ORTHO05D010204 1.1e-08 63.5 99 43.4
PGSC0003DMG400002533 Solanum tuberosum HOM05D008072 ORTHO05D010204 1.1e-08 63.5 113 38.9
Haze_15831 Corylus avellana HOM05D008072 ORTHO05D010204 1.9e-08 62.8 158 31.0
Cpa.g.c31416 Carica papaya HOM05D008072 ORTHO05D010204 2.5e-08 62.4 114 38.6
Nn8g39117 Nelumbo nucifera HOM05D008072 ORTHO05D010204 2.5e-08 62.4 107 39.3
Gohir.A02G118500 Gossypium hirsutum HOM05D008072 ORTHO05D010204 5.7e-08 61.2 99 43.4
MD09G1205700 Malus domestica HOM05D008072 ORTHO05D010204 7.4e-08 60.8 113 39.8
Solyc03g120880.4 Solanum lycopersicum HOM05D004877 ORTHO05D005942 9.7e-08 60.5 109 38.5
Glyma.08G202200 Glycine max HOM05D008072 ORTHO05D010204 1.7e-07 59.7 111 36.9
ECA232G1650 Erigeron canadensis HOM05D004877 ORTHO05D005942 6.3e-07 57.8 100 39.0
MSTRG.9481 Avicennia marina HOM05D008072 ORTHO05D010204 1.8e-06 56.2 117 33.3
CANSAT56G4142 Cannabis sativa HOM05D008072 ORTHO05D010204 4.1e-06 55.1 113 33.6
Lsat_1_v5_gn_4_99940 Lactuca sativa HOM05D008072 ORTHO05D010204 6.9e-06 54.3 105 34.3


User provided reference genes

Program Settings