Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc10g0007100 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.5e-289 998.0 493 100.0
Sc03g0005210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-41 175.3 130 65.4
Sc18g0005330 Simmondsia chinensis HOM05D062493 ORTHO05D388929 6.6e-40 169.5 146 60.3
Sc07g0004870 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.0e-32 144.1 127 55.9
Sc05g0004290 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.1e-29 134.0 109 62.4
Sc22g0004270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.6e-25 120.2 111 50.5
Sc03g0004870 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.3e-24 117.9 105 55.2
Sc04g0004730 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.0e-24 117.5 80 70.0
Sc06g0004280 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.3e-23 114.0 106 56.6
Sc18g0005300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.3e-23 114.0 169 41.4
Sc02g0004930 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-22 112.1 88 65.9
Sc05g0004710 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-22 111.7 100 53.0
Sc02g0005760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.3e-21 107.8 89 59.6
Sc02g0004890 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.9e-21 105.9 84 64.3
Sc05g0003960 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.9e-19 100.9 123 47.2
Sc11g0004200 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.7e-16 91.7 67 67.2
Sc12g0008170 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-15 89.0 128 43.0
Sc11g0003920 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.8e-13 81.6 66 62.1
Sc02g0004860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-12 79.0 67 56.7
Sc02g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.6e-12 76.3 119 39.5
Sc23g0003790 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.3e-11 75.5 66 54.5
Sc21g0003120 Simmondsia chinensis HOM05D065066 ORTHO05D387615 4.9e-11 73.6 84 51.2
Sc02g0005270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.4e-11 73.2 130 36.2
Sc02g0004810 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-10 72.4 64 53.1
FvH4_4g18552 Fragaria vesca HOM05D009149 ORTHO05D003639 2.1e-09 68.2 96 39.6
RcHm_v2.0_Chr7g0194611 Rosa chinensis HOM05D009149 ORTHO05D003639 7.8e-09 66.2 94 37.2
Sabra13G0012400 Salix brachista HOM05D020966 ORTHO05D010251 7.8e-09 66.2 103 37.9
RcHm_v2.0_Chr3g0493631 Rosa chinensis HOM05D009149 ORTHO05D003639 1.7e-08 65.1 84 41.7
RcHm_v2.0_Chr4g0419521 Rosa chinensis HOM05D009149 ORTHO05D003639 2.3e-08 64.7 87 39.1
RcHm_v2.0_Chr6g0291271 Rosa chinensis HOM05D009149 ORTHO05D003639 5.1e-08 63.5 84 40.5
RcHm_v2.0_Chr2g0131351 Rosa chinensis HOM05D009149 ORTHO05D003639 6.6e-08 63.2 84 40.5
RcHm_v2.0_Chr2g0105541 Rosa chinensis HOM05D009149 ORTHO05D003639 8.7e-08 62.8 84 40.5
RcHm_v2.0_Chr1g0350201 Rosa chinensis HOM05D009149 ORTHO05D003639 1.1e-07 62.4 84 40.5
Peaxi162Scf00820g00117 Petunia axillaris HOM05D008778 ORTHO05D003639 1.9e-07 61.6 116 32.8
Sc02g0004790 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.5e-07 61.2 56 51.8
Nitab4.5_0000663g0030 Nicotiana tabacum HOM05D008778 ORTHO05D003639 3.6e-06 57.4 99 34.3


User provided reference genes

Program Settings