Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 8.2e-76 287.0 144 100.0
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 1.7e-44 183.0 158 57.6
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 2.4e-43 179.1 147 61.9
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 4.1e-43 178.3 146 63.0
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 4.6e-42 174.9 148 61.5
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 7.8e-42 174.1 149 59.1
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 1.0e-41 173.7 144 60.4
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 1.3e-41 173.3 158 57.0
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 3.9e-41 171.8 140 59.3
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 6.6e-41 171.0 143 58.7
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 1.9e-40 169.5 153 56.9
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 2.5e-40 169.1 159 56.6
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 3.3e-40 168.7 158 55.7
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 7.3e-40 167.5 152 58.6
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 2.8e-39 165.6 148 56.8
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 4.7e-39 164.9 148 55.4
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 1.4e-38 163.3 149 54.4
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 1.8e-38 162.9 162 56.8
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 1.8e-38 162.9 157 54.8
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 3.1e-38 162.2 157 56.7
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 6.8e-38 161.0 148 56.1
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 8.9e-38 160.6 147 57.1
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 8.9e-38 160.6 150 56.0
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 8.9e-38 160.6 154 53.2
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 1.5e-37 159.8 155 56.1
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 2.0e-37 159.5 155 54.2
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 2.0e-37 159.5 149 55.7
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 2.0e-37 159.5 153 55.6
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 2.0e-37 159.5 158 58.2
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 3.4e-37 158.7 160 54.4
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 3.4e-37 158.7 147 56.5
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 3.4e-37 158.7 148 56.8
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 3.4e-37 158.7 147 55.8
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 4.4e-37 158.3 144 56.2
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 5.8e-37 157.9 160 53.8
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 7.5e-37 157.5 160 53.1
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 9.9e-37 157.1 144 55.6
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 1.7e-36 156.4 154 55.8
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 2.2e-36 156.0 150 56.7
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 3.7e-36 155.2 122 60.7
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 4.9e-36 154.8 145 54.5
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 6.4e-36 154.5 128 57.8
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 8.3e-36 154.1 149 55.7
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 8.3e-36 154.1 149 55.7
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 1.1e-35 153.7 161 53.4
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 1.9e-35 152.9 157 56.7
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 1.9e-35 152.9 123 61.8
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 2.4e-35 152.5 151 52.3
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 2.4e-35 152.5 133 57.9
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 3.2e-35 152.1 123 61.0
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 4.1e-35 151.8 125 61.6
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 4.1e-35 151.8 147 58.5
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 4.1e-35 151.8 150 54.7
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 5.4e-35 151.4 122 59.0
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 7.1e-35 151.0 143 55.9
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 7.1e-35 151.0 143 55.9
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 9.2e-35 150.6 120 62.5
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 1.2e-34 150.2 155 51.6
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 1.6e-34 149.8 123 63.4
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 1.6e-34 149.8 154 52.6
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 1.6e-34 149.8 158 51.9
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 4.6e-34 148.3 131 56.5
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 4.6e-34 148.3 146 52.7
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 6.0e-34 147.9 107 57.9
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 7.8e-34 147.5 123 56.1
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 7.8e-34 147.5 125 64.0
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 1.0e-33 147.1 116 59.5
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 1.0e-33 147.1 136 53.7
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 1.3e-33 146.7 132 55.3
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 1.7e-33 146.4 154 55.8
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 3.0e-33 145.6 148 54.7
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 3.9e-33 145.2 118 58.5
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 3.9e-33 145.2 147 52.4
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 5.1e-33 144.8 166 53.0
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 5.1e-33 144.8 166 53.0
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 6.6e-33 144.4 152 50.7
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 8.6e-33 144.1 159 52.8
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 8.6e-33 144.1 128 58.6
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 1.5e-32 143.3 103 67.0
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 1.9e-32 142.9 169 53.3
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 3.3e-32 142.1 168 53.0
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 7.3e-32 141.0 128 57.0
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 9.5e-32 140.6 166 51.8
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 9.5e-32 140.6 166 51.8
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.6e-31 139.8 128 57.0
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 2.8e-31 139.0 152 51.3
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 3.6e-31 138.7 121 58.7
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 1.1e-30 137.1 137 57.7
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 1.4e-30 136.7 122 59.8
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 1.8e-30 136.3 152 48.0
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 1.8e-30 136.3 132 52.3
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 3.4e-29 132.1 109 58.7
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 9.9e-29 130.6 96 64.6
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 1.3e-28 130.2 104 59.6
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 1.7e-28 129.8 132 53.0
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 8.4e-28 127.5 111 60.4
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 8.4e-28 127.5 116 56.9
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 1.4e-27 126.7 87 64.4
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 7.1e-27 124.4 122 52.5
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 1.2e-26 123.6 103 60.2
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 1.9e-24 116.3 109 56.0
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 9.6e-24 114.0 98 56.1
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 8.4e-20 100.9 100 51.0
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 1.2e-18 97.1 74 58.1
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 2.7e-18 95.9 93 49.5
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 3.3e-16 89.0 86 52.3
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 3.5e-10 68.9 117 36.8
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 4.6e-10 68.6 76 44.7
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 6.7e-09 64.7 99 33.3
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 6.7e-09 64.7 56 50.0
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 8.7e-09 64.3 61 41.0


User provided reference genes

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