Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc10g0006540 Simmondsia chinensis HOM05D005992 ORTHO05D007476 4.7e-88 327.8 159 100.0
Ah.04g163410 Amaranthus hybridus HOM05D005992 ORTHO05D007476 1.5e-46 189.9 162 58.0
AUR62017763 Chenopodium quinoa HOM05D005992 ORTHO05D007476 2.0e-46 189.5 158 60.8
GSVIVG01004128001 Vitis vinifera HOM05D005992 ORTHO05D007476 2.1e-40 169.5 163 59.5
EL10Ac9g23025 Beta vulgaris HOM05D005992 ORTHO05D007476 2.6e-38 162.5 143 59.4
Cpa.g.sc8.7 Carica papaya HOM05D005992 ORTHO05D007476 3.4e-38 162.2 161 54.0
HanXRQChr08g0230801 Helianthus annuus HOM05D005992 ORTHO05D007476 1.7e-37 159.8 163 54.0
Nn7g37421 Nelumbo nucifera HOM05D005992 ORTHO05D007476 2.2e-37 159.5 151 57.0
CSS0023701 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 6.4e-37 157.9 175 52.6
CSS0036227 Camellia sinensis var. sinensis HOM05D005992 ORTHO05D007476 6.4e-37 157.9 175 52.6
Dinv28773 Davidia involucrata HOM05D005992 ORTHO05D007476 2.4e-36 156.0 164 51.8
AUR62032915 Chenopodium quinoa HOM05D005992 ORTHO05D007476 4.1e-36 155.2 128 57.8
Manes.13G058400 Manihot esculenta HOM05D005992 ORTHO05D007476 5.4e-36 154.8 172 52.3
Prupe.8G267200 Prunus persica HOM05D005992 ORTHO05D007476 7.1e-36 154.5 166 52.4
Lsat_1_v5_gn_9_15721 Lactuca sativa HOM05D005992 ORTHO05D007476 9.2e-36 154.1 173 52.0
Potri.014G172600 Populus trichocarpa HOM05D005992 ORTHO05D007476 4.6e-35 151.8 173 53.8
ECA247G1400 Erigeron canadensis HOM05D005992 ORTHO05D007476 6.6e-34 147.9 165 50.3
PGR044G1143 Punica granatum HOM05D005992 ORTHO05D007476 8.6e-34 147.5 148 54.1
Manes.12G055803 Manihot esculenta HOM05D005992 ORTHO05D007476 1.5e-33 146.7 161 52.8
RcHm_v2.0_Chr7g0176831 Rosa chinensis HOM05D005992 ORTHO05D007476 1.5e-33 146.7 168 53.0
TWI75G1816 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 1.5e-33 146.7 158 51.3
FAN04G1498 Fragaria x ananassa HOM05D005992 ORTHO05D007476 1.9e-33 146.4 171 52.0
FvH4_5g18680 Fragaria vesca HOM05D005992 ORTHO05D007476 2.5e-33 146.0 171 52.0
CiPaw.13G059000 Carya illinoinensis HOM05D005992 ORTHO05D007476 3.3e-33 145.6 164 53.7
Hma1.2p1_0161F.1_g071860 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 3.3e-33 145.6 170 48.8
FAN13G0560 Fragaria x ananassa HOM05D005992 ORTHO05D007476 4.3e-33 145.2 171 51.5
FAN08G0048 Fragaria x ananassa HOM05D005992 ORTHO05D007476 9.5e-33 144.1 171 50.3
FAN18G0660 Fragaria x ananassa HOM05D005992 ORTHO05D007476 1.2e-32 143.7 171 50.9
TWI36G1335 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 1.2e-32 143.7 157 49.7
Duzib138G0279 Durio zibethinus HOM05D005992 ORTHO05D007476 2.1e-32 142.9 170 51.8
Gorai.007G163000 Gossypium raimondii HOM05D005992 ORTHO05D007476 4.7e-32 141.7 170 50.6
TWI36G0694 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 4.7e-32 141.7 157 49.7
Gohir.A11G146200 Gossypium hirsutum HOM05D005992 ORTHO05D007476 6.2e-32 141.4 170 50.6
QL09p044779 Quercus lobata HOM05D005992 ORTHO05D007476 1.8e-31 139.8 142 54.2
Gohir.D11G152400 Gossypium hirsutum HOM05D005992 ORTHO05D007476 4.0e-31 138.7 170 50.0
Hma1.2p1_0834F.1_g225730 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 6.8e-31 137.9 169 47.9
COL.COLO4_19718 Corchorus olitorius HOM05D005992 ORTHO05D007476 1.5e-30 136.7 172 51.2
MD03G1298800 Malus domestica HOM05D005992 ORTHO05D007476 2.0e-30 136.3 173 49.1
Thecc.01G203400 Theobroma cacao HOM05D005992 ORTHO05D007476 2.6e-30 136.0 172 47.7
Migut.D00757 Erythranthe guttata HOM05D005992 ORTHO05D007476 4.4e-30 135.2 166 49.4
CDE07G1966 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 1.3e-29 133.7 147 48.3
Cc01_g15730 Coffea canephora HOM05D005992 ORTHO05D007476 1.1e-28 130.6 151 49.7
MBI07_g44661_MAGBIO Magnolia biondii HOM05D005992 ORTHO05D007476 4.1e-28 128.6 142 48.6
Ciclev10016954m.g Citrus clementina HOM05D005992 ORTHO05D007476 5.4e-28 128.3 167 47.3
Oeu058218.1 Olea europaea HOM05D005992 ORTHO05D007476 5.4e-28 128.3 153 46.4
Rhsim01G0246100 Rhododendron simsii HOM05D005992 ORTHO05D007476 7.1e-28 127.9 132 50.8
SGA_v2.0_scaffold8G04484 Striga asiatica HOM05D005992 ORTHO05D007476 7.1e-28 127.9 171 48.5
CDE04G1688 Ceratophyllum demersum HOM05D005992 ORTHO05D007476 1.2e-27 127.1 139 48.2
Duzib133G0028 Durio zibethinus HOM05D005992 ORTHO05D007476 1.2e-27 127.1 173 45.7
DCAR_018600 Daucus carota HOM05D005992 ORTHO05D007476 2.1e-27 126.3 193 42.5
HPP92_004514 Vanilla planifolia HOM05D005992 ORTHO05D007476 2.1e-27 126.3 147 46.3
Psat5g001840 Pisum sativum HOM05D005992 ORTHO05D007476 5.1e-26 121.7 165 44.8
vmacro14669 Vaccinium macrocarpon HOM05D005992 ORTHO05D007476 5.1e-26 121.7 219 37.9
Medtr3g118100 Medicago truncatula HOM05D005992 ORTHO05D007476 8.6e-26 120.9 169 45.0
PSO357G0365 Papaver somniferum HOM05D005992 ORTHO05D007476 1.1e-25 120.6 161 50.3
arahy.Tifrunner.gnm1.ann1.DJH8FA Arachis hypogaea HOM05D005992 ORTHO05D007476 1.9e-25 119.8 156 44.2
CANSAT11G0965 Cannabis sativa HOM05D005992 ORTHO05D007476 1.9e-25 119.8 173 43.9
Eucgr.K02345 Eucalyptus grandis HOM05D005992 ORTHO05D007476 1.9e-25 119.8 171 46.8
Lj1g0017920 Lotus japonicus HOM05D005992 ORTHO05D007476 1.9e-25 119.8 159 44.7
Glyma.06G002700 Glycine max HOM05D005992 ORTHO05D007476 3.3e-25 119.0 150 47.3
Lj1C108T9 Lonicera japonica HOM05D005992 ORTHO05D007476 3.3e-25 119.0 113 52.2
VMungo1309G0397 Vigna mungo HOM05D005992 ORTHO05D007476 3.3e-25 119.0 149 49.0
Phvul.009G118300 Phaseolus vulgaris HOM05D005992 ORTHO05D007476 5.6e-25 118.2 149 47.0
PSO170G4201 Papaver somniferum HOM05D005992 ORTHO05D007476 9.6e-25 117.5 161 48.4
Peaxi162Scf00390g00125 Petunia axillaris HOM05D005992 ORTHO05D007476 1.2e-24 117.1 148 48.6
SalBow6G0883 Salvia bowleyana HOM05D005992 ORTHO05D007476 1.2e-24 117.1 177 44.6
Glyma.04G002700 Glycine max HOM05D005992 ORTHO05D007476 6.2e-24 114.8 160 45.6
Nitab4.5_0009028g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 8.1e-24 114.4 148 47.3
MSTRG.18519 Avicennia marina HOM05D005992 ORTHO05D007476 4.0e-23 112.1 140 49.3
Lalb_Chr11g0061201 Lupinus albus HOM05D005992 ORTHO05D007476 4.0e-23 112.1 147 44.2
Zm00001eb246760 Zea mays HOM05D005992 ORTHO05D007476 4.0e-23 112.1 134 44.8
Ca_15291_v3 Cicer arietinum L. HOM05D005992 ORTHO05D007476 8.9e-23 110.9 175 41.1
Nitab4.5_0005967g0050 Nicotiana tabacum HOM05D005992 ORTHO05D007476 8.9e-23 110.9 147 46.3
ATR0743G072 Amborella trichopoda HOM05D005992 ORTHO05D007476 2.6e-22 109.4 139 41.7
THA.LOC104822452 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 3.4e-22 109.0 153 44.4
Atru.chr6.3466 Acer truncatum HOM05D005992 ORTHO05D007476 4.4e-22 108.6 174 43.7
Os02g0609400 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 4.4e-22 108.6 147 42.9
Sabra14G0132200 Salix brachista HOM05D005992 ORTHO05D007476 7.6e-22 107.8 215 40.0
Solyc06g082830.3 Solanum lycopersicum HOM05D005992 ORTHO05D007476 9.9e-22 107.5 152 45.4
arahy.Tifrunner.gnm1.ann1.B4TR6Y Arachis hypogaea HOM05D005992 ORTHO05D007476 1.3e-21 107.1 149 41.6
Nitab4.5_0008751g0010 Nicotiana tabacum HOM05D005992 ORTHO05D007476 1.7e-21 106.7 153 45.1
TWI18G0378 Tripterygium wilfordii HOM05D005992 ORTHO05D007476 1.7e-21 106.7 124 48.4
Nitab4.5_0001348g0200 Nicotiana tabacum HOM05D005992 ORTHO05D007476 2.2e-21 106.3 153 45.1
SalBow2G0316 Salvia bowleyana HOM05D005992 ORTHO05D007476 4.9e-21 105.1 207 37.7
PGSC0003DMG400027679 Solanum tuberosum HOM05D005992 ORTHO05D007476 4.9e-21 105.1 164 45.1
CiPaw.14G047400 Carya illinoinensis HOM05D005992 ORTHO05D007476 6.4e-21 104.8 113 53.1
TAR362G0776 Trochodendron aralioides HOM05D005992 ORTHO05D007476 1.4e-20 103.6 98 59.2
Sopen06g034190 Solanum pennellii HOM05D005992 ORTHO05D007476 1.9e-20 103.2 153 45.1
CAN.G874.50 Capsicum annuum HOM05D005992 ORTHO05D007476 3.2e-20 102.4 156 46.2
Aqoxy2G04184 Aquilegia oxysepala HOM05D001906 ORTHO05D002083 1.2e-19 100.5 125 44.8
THA.LOC104819021 Tarenaya hassleriana HOM05D005992 ORTHO05D007476 1.3e-18 97.1 151 41.1
unitig_60.g25570 Utricularia gibba HOM05D005992 ORTHO05D007476 3.0e-18 95.9 148 42.6
TPR.G38510 Trifolium pratense HOM05D005992 ORTHO05D007476 1.1e-17 94.0 131 42.7
AL8G21060 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 7.3e-17 91.3 120 49.2
AT5G48335 Arabidopsis thaliana HOM05D005992 ORTHO05D007476 7.3e-17 91.3 120 49.2
CARHR183920 Cardamine hirsuta HOM05D005992 ORTHO05D007476 2.4e-15 86.3 124 45.2
Thhalv10021713m.g Eutrema salsugineum HOM05D005992 ORTHO05D007476 4.0e-15 85.5 154 36.4
BraA05t22792Z Brassica rapa HOM05D005992 ORTHO05D007476 9.0e-15 84.3 163 35.6
Os02g0599500 Oryza sativa ssp. japonica HOM05D005992 ORTHO05D007476 1.5e-14 83.6 115 39.1
Oeu064700.1 Olea europaea HOM05D005992 ORTHO05D007476 3.4e-14 82.4 107 42.1
Carub.0008s0791 Capsella rubella HOM05D005992 ORTHO05D007476 4.4e-14 82.0 122 46.7
Sp3g06520 Schrenkiella parvula HOM05D005992 ORTHO05D007476 3.8e-13 79.0 154 34.4
Actinidia23817 Actinidia chinensis HOM05D005992 ORTHO05D007476 5.4e-12 75.1 83 48.2
Hma1.2p1_1756F.1_g301045 Hydrangea macrophylla HOM05D005992 ORTHO05D007476 7.1e-12 74.7 104 47.1
A05p40610 Brassica napus HOM05D005992 ORTHO05D007476 2.1e-11 73.2 163 32.5
C05p59720 Brassica napus HOM05D005992 ORTHO05D007476 6.0e-11 71.6 163 33.7
BolC5t34626H Brassica oleracea HOM05D005992 ORTHO05D007476 6.0e-11 71.6 163 33.7
AL3G18940 Arabidopsis lyrata HOM05D005992 ORTHO05D007476 5.1e-10 68.6 91 39.6
Carub.0003s0715 Capsella rubella HOM05D005992 ORTHO05D007476 6.6e-10 68.2 84 44.0
PGSC0003DMG400020300 Solanum tuberosum HOM05D005992 ORTHO05D007476 1.5e-09 67.0 85 45.9
CARHR082280 Cardamine hirsuta HOM05D005992 ORTHO05D007476 1.6e-08 63.5 154 33.8
Aa31LG5G18140 Aethionema arabicum HOM05D005992 ORTHO05D007476 4.8e-08 62.0 84 42.9
CDE06G0073 Ceratophyllum demersum HOM05D001961 ORTHO05D002286 4.8e-08 62.0 74 50.0
BcaC05g29553 Brassica carinata HOM05D005992 ORTHO05D007476 6.2e-08 61.6 125 36.8
CiPaw.10G142500 Carya illinoinensis HOM05D005992 ORTHO05D007476 6.2e-08 61.6 61 54.1
Sopen09g012660 Solanum pennellii HOM05D005992 ORTHO05D007476 6.2e-08 61.6 71 45.1
Aqoxy4G02934 Aquilegia oxysepala HOM05D001961 ORTHO05D002286 1.1e-07 60.8 53 49.1
Gorai.009G395900 Gossypium raimondii HOM05D005992 ORTHO05D007476 2.0e-06 56.6 55 50.9
AT3G07580 Arabidopsis thaliana HOM05D005992 ORTHO05D007476 2.6e-06 56.2 121 33.1


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