Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc10g0005600 Simmondsia chinensis HOM05D007142 ORTHO05D008983 1.1e-132 476.5 225 100.0
GSVIVG01013184001 Vitis vinifera HOM05D007142 ORTHO05D008983 1.4e-98 363.2 232 74.6
Dinv28934 Davidia involucrata HOM05D007142 ORTHO05D008983 4.1e-98 361.7 219 79.5
Actinidia25952 Actinidia chinensis HOM05D007142 ORTHO05D008983 7.0e-98 360.9 198 83.8
COL.COLO4_17070 Corchorus olitorius HOM05D007142 ORTHO05D008983 1.6e-97 359.8 214 79.4
Duzib205G0350 Durio zibethinus HOM05D007142 ORTHO05D008983 1.0e-96 357.1 219 76.7
Thecc.03G230800 Theobroma cacao HOM05D007142 ORTHO05D008983 1.0e-96 357.1 233 74.2
RcHm_v2.0_Chr7g0209181 Rosa chinensis HOM05D007142 ORTHO05D008983 1.3e-96 356.7 216 77.8
Gorai.004G186600 Gossypium raimondii HOM05D007142 ORTHO05D008983 2.3e-96 355.9 222 76.6
Ah.12g054590 Amaranthus hybridus HOM05D007142 ORTHO05D008983 5.0e-96 354.8 233 74.7
EL10Ac5g12171 Beta vulgaris HOM05D007142 ORTHO05D008983 5.0e-96 354.8 232 74.6
FAN08G2513 Fragaria x ananassa HOM05D007142 ORTHO05D008983 5.0e-96 354.8 216 77.8
CAN.G201.17 Capsicum annuum HOM05D007142 ORTHO05D008983 1.5e-95 353.2 215 77.2
QL12p006204 Quercus lobata HOM05D007142 ORTHO05D008983 1.5e-95 353.2 232 74.6
FvH4_5g21680 Fragaria vesca HOM05D007142 ORTHO05D008983 1.9e-95 352.8 216 77.3
TAR629G1364 Trochodendron aralioides HOM05D007142 ORTHO05D008983 1.9e-95 352.8 204 79.4
AUR62018753 Chenopodium quinoa HOM05D007142 ORTHO05D008983 2.5e-95 352.4 233 74.2
Manes.17G016003 Manihot esculenta HOM05D007142 ORTHO05D008983 3.3e-95 352.1 217 77.0
Atru.chr6.1752 Acer truncatum HOM05D007142 ORTHO05D008983 7.3e-95 350.9 232 73.3
FAN18G0559 Fragaria x ananassa HOM05D007142 ORTHO05D008983 9.5e-95 350.5 216 76.9
Gohir.D08G178400 Gossypium hirsutum HOM05D007142 ORTHO05D008983 9.5e-95 350.5 219 76.7
Potri.003G089900 Populus trichocarpa HOM05D007142 ORTHO05D008983 9.5e-95 350.5 217 77.0
Cc08_g02450 Coffea canephora HOM05D007142 ORTHO05D000161 1.2e-94 350.1 219 77.2
arahy.Tifrunner.gnm1.ann1.J3YA34 Arachis hypogaea HOM05D007142 ORTHO05D008983 1.6e-94 349.7 210 77.1
vmacro00342 Vaccinium macrocarpon HOM05D007142 ORTHO05D008983 2.8e-94 349.0 217 76.5
Glyma.17G154151 Glycine max HOM05D007142 ORTHO05D008983 3.6e-94 348.6 213 77.5
Lalb_Chr09g0329501 Lupinus albus HOM05D007142 ORTHO05D008983 3.6e-94 348.6 213 76.5
Prupe.5G040300 Prunus persica HOM05D007142 ORTHO05D008983 3.6e-94 348.6 219 74.9
MD06G1031800 Malus domestica HOM05D007142 ORTHO05D008983 4.7e-94 348.2 219 75.3
Ciclev10032530m.g Citrus clementina HOM05D007142 ORTHO05D008983 8.0e-94 347.4 233 72.1
Nitab4.5_0014378g0020 Nicotiana tabacum HOM05D007142 ORTHO05D008983 8.0e-94 347.4 217 77.4
Lsat_1_v5_gn_3_16621 Lactuca sativa HOM05D007142 ORTHO05D008983 1.0e-93 347.1 225 72.9
Nitab4.5_0003100g0010 Nicotiana tabacum HOM05D007142 ORTHO05D008983 1.0e-93 347.1 217 77.9
CiPaw.11G091400 Carya illinoinensis HOM05D007142 ORTHO05D008983 1.4e-93 346.7 214 76.6
VMungo0251G3176 Vigna mungo HOM05D007142 ORTHO05D008983 1.4e-93 346.7 217 77.4
PGR031G3753 Punica granatum HOM05D007142 ORTHO05D008983 1.8e-93 346.3 227 73.6
ECA246G1460 Erigeron canadensis HOM05D007142 ORTHO05D008983 2.3e-93 345.9 225 73.3
Eucgr.D02183 Eucalyptus grandis HOM05D007142 ORTHO05D008983 2.3e-93 345.9 218 76.1
Aqoxy3G02453 Aquilegia oxysepala HOM05D007142 ORTHO05D008983 3.1e-93 345.5 215 75.8
CDE11G1210 Ceratophyllum demersum HOM05D007142 ORTHO05D008983 4.0e-93 345.1 212 75.5
Sopen06g021290 Solanum pennellii HOM05D007142 ORTHO05D008983 4.0e-93 345.1 215 77.2
CANSAT21G2079 Cannabis sativa HOM05D007142 ORTHO05D008983 5.2e-93 344.7 220 75.5
Solyc06g061090.3 Solanum lycopersicum HOM05D007142 ORTHO05D008983 5.2e-93 344.7 215 77.2
TWI15G0113 Tripterygium wilfordii HOM05D007142 ORTHO05D008983 5.2e-93 344.7 213 77.5
Cpa.g.sc665.3 Carica papaya HOM05D007142 ORTHO05D008983 8.9e-93 344.0 226 72.1
PSO339G0102 Papaver somniferum HOM05D007142 ORTHO05D008983 8.9e-93 344.0 206 77.2
Haze_08264 Corylus avellana HOM05D007142 ORTHO05D008983 1.2e-92 343.6 214 77.6
Psat4g079200 Pisum sativum HOM05D007142 ORTHO05D008983 1.2e-92 343.6 233 71.7
PSO384G0274 Papaver somniferum HOM05D007142 ORTHO05D008983 2.0e-92 342.8 206 76.7
Sed0005643 Sechium edule HOM05D007142 ORTHO05D008983 3.4e-92 342.0 230 72.6
CsaV3_3G001880 Cucumis sativus L. HOM05D007142 ORTHO05D008983 4.4e-92 341.7 210 77.6
ClCG10G001790 Citrullus lanatus HOM05D007142 ORTHO05D008983 7.5e-92 340.9 201 79.6
DCAR_032211 Daucus carota HOM05D007142 ORTHO05D008983 1.7e-91 339.7 206 76.7
Lj4g0022330 Lotus japonicus HOM05D007142 ORTHO05D008983 1.7e-91 339.7 232 70.7
HanXRQChr17g0535721 Helianthus annuus HOM05D007142 ORTHO05D008983 2.2e-91 339.3 225 72.0
Medtr4g098620 Medicago truncatula HOM05D007142 ORTHO05D008983 4.9e-91 338.2 213 76.1
TPR.G28665 Trifolium pratense HOM05D007142 ORTHO05D008983 6.4e-91 337.8 213 75.6
Phvul.003G229700 Phaseolus vulgaris HOM05D007142 ORTHO05D008983 8.3e-91 337.4 217 74.7
ATR0049G055 Amborella trichopoda HOM05D007142 ORTHO05D008983 1.1e-90 337.0 205 76.1
MELO3C013862.2 Cucumis melo HOM05D007142 ORTHO05D008983 1.1e-90 337.0 202 78.7
SGA_v2.0_scaffold4519G54498 Striga asiatica HOM05D007142 ORTHO05D008983 1.4e-90 336.7 216 75.9
Sabra03G0059800 Salix brachista HOM05D007142 ORTHO05D008983 5.4e-90 334.7 237 70.0
SalBow4G2536 Salvia bowleyana HOM05D007142 ORTHO05D008983 1.3e-88 330.1 195 80.0
HPP92_004467 Vanilla planifolia HOM05D007142 ORTHO05D008983 3.9e-88 328.6 217 73.7
Peaxi162Scf00603g00413 Petunia axillaris HOM05D007142 ORTHO05D008983 6.6e-88 327.8 219 74.4
Migut.F01892 Erythranthe guttata HOM05D007142 ORTHO05D008983 8.6e-88 327.4 209 75.1
MSTRG.9125 Avicennia marina HOM05D007142 ORTHO05D008983 4.3e-87 325.1 204 76.0
HPP92_004488 Vanilla planifolia HOM05D007142 ORTHO05D008983 5.6e-87 324.7 217 73.3
Aa31LG2G13430 Aethionema arabicum HOM05D007142 ORTHO05D008983 9.5e-87 323.9 239 67.8
AL1G46770 Arabidopsis lyrata HOM05D007142 ORTHO05D008983 4.7e-86 321.6 215 74.4
A09p33690 Brassica napus HOM05D007142 ORTHO05D008983 4.7e-86 321.6 223 72.2
Carub.0001s3093 Capsella rubella HOM05D007142 ORTHO05D008983 4.7e-86 321.6 215 73.5
C05p31960 Brassica napus HOM05D007142 ORTHO05D008983 6.2e-86 321.2 223 72.2
BolC5t31922H Brassica oleracea HOM05D007142 ORTHO05D008983 6.2e-86 321.2 223 72.2
BcaC05g27290 Brassica carinata HOM05D007142 ORTHO05D008983 1.8e-85 319.7 223 72.2
BcaB07g32947 Brassica carinata HOM05D007142 ORTHO05D008983 3.1e-85 318.9 217 72.8
BraA09t38918Z Brassica rapa HOM05D007142 ORTHO05D008983 3.1e-85 318.9 223 71.7
AT1G32520 Arabidopsis thaliana HOM05D007142 ORTHO05D008983 5.2e-85 318.2 216 72.2
Thhalv10008641m.g Eutrema salsugineum HOM05D007142 ORTHO05D008983 2.0e-84 316.2 221 71.9
CARHR031970 Cardamine hirsuta HOM05D007142 ORTHO05D008983 4.4e-84 315.1 215 72.1
AUR62007246 Chenopodium quinoa HOM05D007142 ORTHO05D008983 5.8e-84 314.7 204 74.0
THA.LOC104807961 Tarenaya hassleriana HOM05D007142 ORTHO05D008983 5.8e-84 314.7 236 68.2
Lj2C242T12 Lonicera japonica HOM05D007142 ORTHO05D008983 7.5e-84 314.3 182 79.7
Nn6g33627 Nelumbo nucifera HOM05D007142 ORTHO05D008983 1.9e-82 309.7 173 82.7
FAN04G2755 Fragaria x ananassa HOM05D007142 ORTHO05D008983 4.1e-82 308.5 217 71.0
Zm00001eb090700 Zea mays HOM05D007142 ORTHO05D008983 1.2e-81 307.0 212 68.4
PGSC0003DMG400002104 Solanum tuberosum HOM05D007142 ORTHO05D008983 2.1e-81 306.2 173 83.8
Rhsim11G0012900 Rhododendron simsii HOM05D007142 ORTHO05D008983 2.7e-81 305.8 179 79.3
Mapoly0005s0008 Marchantia polymorpha HOM05D007142 ORTHO05D008983 3.9e-80 302.0 213 67.1
FAN13G1057 Fragaria x ananassa HOM05D007142 ORTHO05D008983 6.8e-77 291.2 178 77.5
AagrBONN_evm.TU.Sc2ySwM_362.655 Anthoceros agrestis HOM05D007142 ORTHO05D008983 1.5e-76 290.0 210 66.7
unitig_32.g11901 Utricularia gibba HOM05D007142 ORTHO05D008983 1.5e-76 290.0 174 78.7
Sp1g28380 Schrenkiella parvula HOM05D007142 ORTHO05D008983 1.7e-75 286.6 202 70.3
MBI04_g22954_MAGBIO Magnolia biondii HOM05D007142 ORTHO05D008983 2.4e-74 282.7 165 81.2
arahy.Tifrunner.gnm1.ann1.KYR2NU Arachis hypogaea HOM05D007142 ORTHO05D008983 1.6e-70 270.0 206 64.6
SEGI_34411 Sequoiadendron giganteum HOM05D007142 ORTHO05D008983 1.8e-69 266.5 189 67.2
Gohir.A08G158100 Gossypium hirsutum HOM05D007142 ORTHO05D008983 5.6e-63 245.0 166 70.5
SMO367G0110 Selaginella moellendorffii HOM05D007142 ORTHO05D008983 8.1e-46 188.0 126 71.4
Os11g0220300 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 4.5e-44 182.2 124 66.9
PRCOL_00005169 Prasinoderma coloniale HOM05D007142 ORTHO05D008983 5.5e-42 175.3 216 45.4
MCO11G179 Micromonas commoda HOM05D007142 ORTHO05D008983 3.1e-29 132.9 185 41.1
Os07g0120051 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 2.1e-25 120.2 125 52.0
Hma1.2p1_0585F.1_g183620 Hydrangea macrophylla HOM05D007142 ORTHO05D008983 9.7e-23 111.3 62 83.9
Glyma.05G112900 Glycine max HOM05D007142 ORTHO05D008983 3.4e-20 102.8 173 38.2
Oeu029960.1 Olea europaea HOM05D007142 ORTHO05D008983 6.5e-19 98.6 62 75.8
Dinv25200 Davidia involucrata HOM05D007142 ORTHO05D008983 2.7e-17 93.2 149 40.9
MCO05G635 Micromonas commoda HOM05D007142 ORTHO05D008983 2.0e-12 77.0 171 29.2
Os06g0318400 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 7.2e-10 68.6 41 73.2
Os11g0275900 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 5.7e-07 58.9 42 64.3


User provided reference genes

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