Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc10g0005200 Simmondsia chinensis HOM05D002132 ORTHO05D002168 1.7e-48 195.7 96 100.0
Sc23g0005790 Simmondsia chinensis HOM05D002132 ORTHO05D002168 5.6e-20 100.9 74 71.6
Hund03310 Selenicereus undatus HOM05D002132 ORTHO05D002168 1.2e-14 83.2 74 59.5
Cc08_g11020 Coffea canephora HOM05D002132 ORTHO05D002168 3.5e-14 81.6 95 47.4
Oeu052504.2 Olea europaea HOM05D002132 ORTHO05D002168 3.9e-13 78.2 97 49.5
Hund19433 Selenicereus undatus HOM05D002132 ORTHO05D002168 3.9e-13 78.2 76 52.6
COL.COLO4_21102 Corchorus olitorius HOM05D002132 ORTHO05D002168 6.6e-13 77.4 97 45.4
Lj8C523T4 Lonicera japonica HOM05D002132 ORTHO05D002168 1.9e-12 75.9 74 50.0
PGR044G0384 Punica granatum HOM05D002132 ORTHO05D002168 1.9e-12 75.9 73 54.8
Atru.chr7.1923 Acer truncatum HOM05D002132 ORTHO05D002168 3.3e-12 75.1 72 47.2
AUR62039154 Chenopodium quinoa HOM05D002132 ORTHO05D002168 3.3e-12 75.1 73 54.8
FAN15G2516 Fragaria x ananassa HOM05D002132 ORTHO05D002168 3.3e-12 75.1 72 52.8
Gohir.A07G021300 Gossypium hirsutum HOM05D002132 ORTHO05D002168 3.3e-12 75.1 72 51.4
PGR044G2139 Punica granatum HOM05D002132 ORTHO05D002168 3.3e-12 75.1 73 53.4
Thecc.09G058600 Theobroma cacao HOM05D002132 ORTHO05D002168 3.3e-12 75.1 97 43.3
Ah.10g034090 Amaranthus hybridus HOM05D002132 ORTHO05D002168 4.3e-12 74.7 73 54.8
EL10Ac2g03818 Beta vulgaris HOM05D002132 ORTHO05D002168 4.3e-12 74.7 73 56.2
Gorai.001G021800 Gossypium raimondii HOM05D002132 ORTHO05D002168 4.3e-12 74.7 72 50.0
Eucgr.C03069 Eucalyptus grandis HOM05D002132 ORTHO05D002168 5.6e-12 74.3 72 52.8
FvH4_2g31431 Fragaria vesca HOM05D002132 ORTHO05D002168 5.6e-12 74.3 72 51.4
Nitab4.5_0013331g0020 Nicotiana tabacum HOM05D002132 ORTHO05D002168 5.6e-12 74.3 99 45.5
Duzib187G1549 Durio zibethinus HOM05D002132 ORTHO05D002168 7.3e-12 73.9 76 47.4
Eucgr.L02858 Eucalyptus grandis HOM05D002132 ORTHO05D002168 7.3e-12 73.9 72 52.8
Lsat_1_v5_gn_8_110101 Lactuca sativa HOM05D002132 ORTHO05D002168 7.3e-12 73.9 72 50.0
Nitab4.5_0002797g0040 Nicotiana tabacum HOM05D002132 ORTHO05D002168 7.3e-12 73.9 99 45.5
Actinidia29321 Actinidia chinensis HOM05D002132 ORTHO05D002168 9.6e-12 73.6 74 51.4
Oeu034196.1 Olea europaea HOM05D002132 ORTHO05D002168 9.6e-12 73.6 74 54.1
TWI34G0551 Tripterygium wilfordii HOM05D002132 ORTHO05D002168 9.6e-12 73.6 73 50.7
TAR626G0703 Trochodendron aralioides HOM05D002132 ORTHO05D002168 9.6e-12 73.6 69 55.1
CiPaw.15G036000 Carya illinoinensis HOM05D002132 ORTHO05D002168 1.2e-11 73.2 95 47.4
Migut.A00105 Erythranthe guttata HOM05D002132 ORTHO05D002168 1.2e-11 73.2 95 45.3
Eucgr.C03067 Eucalyptus grandis HOM05D002132 ORTHO05D002168 1.2e-11 73.2 68 52.9
Prupe.1G408000 Prunus persica HOM05D002132 ORTHO05D002168 1.2e-11 73.2 99 41.4
RcHm_v2.0_Chr6g0311381 Rosa chinensis HOM05D002132 ORTHO05D002168 1.2e-11 73.2 72 50.0
Ciclev10007414m.g Citrus clementina HOM05D002132 ORTHO05D002168 1.6e-11 72.8 73 50.7
Haze_18141 Corylus avellana HOM05D002132 ORTHO05D002168 1.6e-11 72.8 95 46.3
CsaV3_4G035860 Cucumis sativus L. HOM05D002132 ORTHO05D002168 1.6e-11 72.8 95 42.1
QL02p000437 Quercus lobata HOM05D002132 ORTHO05D002168 1.6e-11 72.8 73 47.9
SGA_v2.0_scaffold20G09187 Striga asiatica HOM05D002132 ORTHO05D002168 1.6e-11 72.8 95 45.3
CiPaw.15G035800 Carya illinoinensis HOM05D002132 ORTHO05D002168 2.1e-11 72.4 73 50.7
Nn6g35559 Nelumbo nucifera HOM05D002132 ORTHO05D002168 2.1e-11 72.4 71 50.7
CSS0042151 Camellia sinensis var. sinensis HOM05D002132 ORTHO05D002168 2.8e-11 72.0 73 53.4
CsaV3_4G035880 Cucumis sativus L. HOM05D002132 ORTHO05D002168 2.8e-11 72.0 95 40.0
Manes.16G083000 Manihot esculenta HOM05D002132 ORTHO05D002168 2.8e-11 72.0 64 57.8
Cfa017987 Carpinus fangiana HOM05D002132 ORTHO05D002168 3.6e-11 71.6 95 41.1
Cfa017988 Carpinus fangiana HOM05D002132 ORTHO05D002168 3.6e-11 71.6 95 41.1
MD15G1054400 Malus domestica HOM05D002132 ORTHO05D002168 3.6e-11 71.6 75 46.7
SalBow4G2233 Salvia bowleyana HOM05D002132 ORTHO05D002168 3.6e-11 71.6 67 53.7
Dinv12453 Davidia involucrata HOM05D002132 ORTHO05D002168 4.7e-11 71.2 73 49.3
MD15G1098900 Malus domestica HOM05D002132 ORTHO05D002168 4.7e-11 71.2 73 52.1
CiPaw.16G026300 Carya illinoinensis HOM05D002132 ORTHO05D002168 6.2e-11 70.9 73 47.9
AUR62009110 Chenopodium quinoa HOM05D002132 ORTHO05D002168 6.2e-11 70.9 73 52.1
Haze_18142 Corylus avellana HOM05D002132 ORTHO05D002168 6.2e-11 70.9 73 49.3
Lj1g0006537 Lotus japonicus HOM05D002132 ORTHO05D002168 6.2e-11 70.9 73 45.2
MD08G1066500 Malus domestica HOM05D002132 ORTHO05D002168 6.2e-11 70.9 72 47.2
MD08G1067200 Malus domestica HOM05D002132 ORTHO05D002168 6.2e-11 70.9 72 47.2
Peaxi162Scf00070g00017 Petunia axillaris HOM05D002132 ORTHO05D002168 6.2e-11 70.9 69 49.3
Cfa017989 Carpinus fangiana HOM05D002132 ORTHO05D002168 8.1e-11 70.5 95 41.1
Cfa017990 Carpinus fangiana HOM05D002132 ORTHO05D002168 8.1e-11 70.5 95 41.1
ClCG05G018080 Citrullus lanatus HOM05D002132 ORTHO05D002168 8.1e-11 70.5 73 45.2
Duzib168G1664 Durio zibethinus HOM05D002132 ORTHO05D002168 8.1e-11 70.5 101 41.6
MD08G1066400 Malus domestica HOM05D002132 ORTHO05D002168 8.1e-11 70.5 72 50.0
THA.LOC104803719 Tarenaya hassleriana HOM05D002132 ORTHO05D002168 8.1e-11 70.5 73 46.6
Cfa017992 Carpinus fangiana HOM05D002132 ORTHO05D002168 1.1e-10 70.1 95 44.2
Prupe.1G407900 Prunus persica HOM05D002132 ORTHO05D002168 1.1e-10 70.1 72 45.8
Actinidia25708 Actinidia chinensis HOM05D002132 ORTHO05D002168 1.4e-10 69.7 101 44.6
arahy.Tifrunner.gnm1.ann1.PS2EEH Arachis hypogaea HOM05D002132 ORTHO05D002168 1.4e-10 69.7 73 45.2
Cpa.g.sc7.153 Carica papaya HOM05D002132 ORTHO05D002168 1.4e-10 69.7 73 45.2
Sed0026861 Sechium edule HOM05D002132 ORTHO05D002168 1.4e-10 69.7 72 47.2
Ca_15815_v3 Cicer arietinum L. HOM05D002132 ORTHO05D002168 1.8e-10 69.3 72 45.8
Ca_15849_v3 Cicer arietinum L. HOM05D002132 ORTHO05D002168 1.8e-10 69.3 72 45.8
PSO210G1375 Papaver somniferum HOM05D002132 ORTHO05D002168 1.8e-10 69.3 72 45.8
unitig_0.g2556 Utricularia gibba HOM05D002132 ORTHO05D002168 1.8e-10 69.3 100 44.0
MELO3C016894.2 Cucumis melo HOM05D002132 ORTHO05D002168 2.4e-10 68.9 95 41.1
Lj7A251T29 Lonicera japonica HOM05D002132 ORTHO05D002168 2.4e-10 68.9 74 44.6
Lj7C250G5 Lonicera japonica HOM05D002132 ORTHO05D002168 2.4e-10 68.9 74 44.6
MD10G1090900 Malus domestica HOM05D002132 ORTHO05D002168 2.4e-10 68.9 68 52.9
DCAR_003141 Daucus carota HOM05D002132 ORTHO05D002168 3.1e-10 68.6 74 47.3
HanXRQChr06g0181111 Helianthus annuus HOM05D002132 ORTHO05D002168 3.1e-10 68.6 100 40.0
SGA_v2.0_scaffold33G13515 Striga asiatica HOM05D002132 ORTHO05D002168 3.1e-10 68.6 65 52.3
GSVIVG01035421001 Vitis vinifera HOM05D002132 ORTHO05D002168 3.1e-10 68.6 72 45.8
Actinidia03550 Actinidia chinensis HOM05D002132 ORTHO05D002168 4.0e-10 68.2 73 50.7
arahy.Tifrunner.gnm1.ann1.P9B8Q3 Arachis hypogaea HOM05D002132 ORTHO05D002168 4.0e-10 68.2 73 43.8
CSS0018343 Camellia sinensis var. sinensis HOM05D002132 ORTHO05D002168 4.0e-10 68.2 73 50.7
CSS0047495 Camellia sinensis var. sinensis HOM05D002132 ORTHO05D002168 4.0e-10 68.2 73 50.7
Gohir.A13G187800 Gossypium hirsutum HOM05D002132 ORTHO05D002168 4.0e-10 68.2 71 52.1
MBI05_g21327_MAGBIO Magnolia biondii HOM05D002132 ORTHO05D002168 4.0e-10 68.2 69 49.3
Medtr3g104720 Medicago truncatula HOM05D002132 ORTHO05D002168 4.0e-10 68.2 72 43.1
PSO210G0062 Papaver somniferum HOM05D002132 ORTHO05D002168 4.0e-10 68.2 72 45.8
CAN.G56.8 Capsicum annuum HOM05D002132 ORTHO05D002168 5.2e-10 67.8 73 54.8
Lj7C249G2 Lonicera japonica HOM05D002132 ORTHO05D002168 5.2e-10 67.8 60 51.7
A08p17780 Brassica napus HOM05D002132 ORTHO05D002168 6.8e-10 67.4 73 45.2
C03p86830 Brassica napus HOM05D002132 ORTHO05D002168 6.8e-10 67.4 73 45.2
BraA08t33729Z Brassica rapa HOM05D002132 ORTHO05D002168 6.8e-10 67.4 73 45.2
Cfa017994 Carpinus fangiana HOM05D002132 ORTHO05D002168 6.8e-10 67.4 97 41.2
Lalb_Chr23g0267911 Lupinus albus HOM05D002132 ORTHO05D002168 6.8e-10 67.4 60 46.7
vmacro05077 Vaccinium macrocarpon HOM05D002132 ORTHO05D002168 6.8e-10 67.4 74 51.4
CANSAT25G1699 Cannabis sativa HOM05D002132 ORTHO05D002168 8.9e-10 67.0 80 46.2
FvH4_2g31440 Fragaria vesca HOM05D002132 ORTHO05D002168 1.2e-09 66.6 59 50.8
FAN24G0677 Fragaria x ananassa HOM05D002132 ORTHO05D002168 1.2e-09 66.6 59 50.8
Psat5g032480 Pisum sativum HOM05D002132 ORTHO05D002168 1.2e-09 66.6 72 40.3
QL08p007057 Quercus lobata HOM05D002132 ORTHO05D002168 1.2e-09 66.6 73 47.9
CANSAT25G1417 Cannabis sativa HOM05D002132 ORTHO05D002168 1.5e-09 66.2 58 55.2
FAN20G0053 Fragaria x ananassa HOM05D002132 ORTHO05D002168 1.5e-09 66.2 59 49.2
Hma1.2p1_1126F.1_g259655 Hydrangea macrophylla HOM05D002132 ORTHO05D002168 1.5e-09 66.2 76 43.4
Lj7A256T44 Lonicera japonica HOM05D002132 ORTHO05D002168 1.5e-09 66.2 73 47.9
Rhsim07G0175300 Rhododendron simsii HOM05D002132 ORTHO05D002168 1.5e-09 66.2 65 55.4
Sabra06G0173600 Salix brachista HOM05D002132 ORTHO05D002168 1.5e-09 66.2 55 54.5
Duzib168G0097 Durio zibethinus HOM05D002132 ORTHO05D002168 2.0e-09 65.9 74 44.6
Aqoxy7G03998 Aquilegia oxysepala HOM05D002132 ORTHO05D002168 2.6e-09 65.5 66 47.0
AL7G18480 Arabidopsis lyrata HOM05D002132 ORTHO05D002168 2.6e-09 65.5 73 43.8
BolC3t20977H Brassica oleracea HOM05D002132 ORTHO05D002168 2.6e-09 65.5 73 45.2
Carub.0007s0736 Capsella rubella HOM05D002132 ORTHO05D002168 2.6e-09 65.5 73 43.8
Lj7C252G9 Lonicera japonica HOM05D002132 ORTHO05D002168 2.6e-09 65.5 60 50.0
MBI05_g21323_MAGBIO Magnolia biondii HOM05D002132 ORTHO05D002168 2.6e-09 65.5 83 41.0
PGSC0003DMG400008191 Solanum tuberosum HOM05D002132 ORTHO05D002168 2.6e-09 65.5 73 49.3
ECA236G0869 Erigeron canadensis HOM05D002132 ORTHO05D002168 3.4e-09 65.1 69 46.4
Thhalv10024371m.g Eutrema salsugineum HOM05D002132 ORTHO05D002168 3.4e-09 65.1 73 42.5
Manes.03G050900 Manihot esculenta HOM05D002132 ORTHO05D002168 3.4e-09 65.1 51 56.9
Psat5g032440 Pisum sativum HOM05D002132 ORTHO05D002168 3.4e-09 65.1 72 41.7
Solyc08g062630.3 Solanum lycopersicum HOM05D002132 ORTHO05D002168 3.4e-09 65.1 73 50.7
CARHR241120 Cardamine hirsuta HOM05D002132 ORTHO05D002168 4.4e-09 64.7 73 43.8
MD08G1067100 Malus domestica HOM05D002132 ORTHO05D002168 4.4e-09 64.7 73 46.6
Potri.006G224500 Populus trichocarpa HOM05D002132 ORTHO05D002168 4.4e-09 64.7 55 52.7
Sopen08g018150 Solanum pennellii HOM05D002132 ORTHO05D002168 4.4e-09 64.7 73 49.3
Glyma.04G053300 Glycine max HOM05D002132 ORTHO05D002168 5.8e-09 64.3 73 43.8
QL02p000590 Quercus lobata HOM05D002132 ORTHO05D002168 5.8e-09 64.3 69 49.3
Sp7g30840 Schrenkiella parvula HOM05D002132 ORTHO05D002168 5.8e-09 64.3 73 42.5
AT4G33090 Arabidopsis thaliana HOM05D002132 ORTHO05D002168 7.6e-09 63.9 73 42.5
BcaC09g52110 Brassica carinata HOM05D002132 ORTHO05D002168 7.6e-09 63.9 73 43.8
CANSAT25G1701 Cannabis sativa HOM05D002132 ORTHO05D002168 7.6e-09 63.9 90 45.6
Gohir.D13G194700 Gossypium hirsutum HOM05D002132 ORTHO05D002168 7.6e-09 63.9 71 50.7
Manes.03G051100 Manihot esculenta HOM05D002132 ORTHO05D002168 7.6e-09 63.9 64 51.6
Aa31LG4G13360 Aethionema arabicum HOM05D002132 ORTHO05D002168 9.9e-09 63.5 73 45.2
BcaC09g52106 Brassica carinata HOM05D002132 ORTHO05D002168 9.9e-09 63.5 98 37.8
Lj5g0021606 Lotus japonicus HOM05D002132 ORTHO05D002168 9.9e-09 63.5 64 45.3
MBI05_g21329_MAGBIO Magnolia biondii HOM05D002132 ORTHO05D002168 9.9e-09 63.5 83 41.0
MBI05_g33749_MAGBIO Magnolia biondii HOM05D002132 ORTHO05D002168 9.9e-09 63.5 83 41.0
QL07p004529 Quercus lobata HOM05D002132 ORTHO05D002168 1.3e-08 63.2 101 37.6
RcHm_v2.0_Chr6g0311371 Rosa chinensis HOM05D002132 ORTHO05D002168 1.3e-08 63.2 59 47.5
BcaNung07030 Brassica carinata HOM05D002132 ORTHO05D002168 1.7e-08 62.8 74 43.2
Nn8g39013 Nelumbo nucifera HOM05D002132 ORTHO05D002168 1.7e-08 62.8 72 45.8
HPP92_023987 Vanilla planifolia HOM05D002132 ORTHO05D002168 1.7e-08 62.8 71 46.5
HPP92_023997 Vanilla planifolia HOM05D002132 ORTHO05D002168 1.7e-08 62.8 71 46.5
A01p05110 Brassica napus HOM05D002132 ORTHO05D002168 2.2e-08 62.4 99 37.4
C01p05590 Brassica napus HOM05D002132 ORTHO05D002168 2.2e-08 62.4 99 37.4
BolC1t00539H Brassica oleracea HOM05D002132 ORTHO05D002168 2.2e-08 62.4 99 37.4
BraA01t00494Z Brassica rapa HOM05D002132 ORTHO05D002168 2.2e-08 62.4 99 37.4
Prupe.1G457300 Prunus persica HOM05D002132 ORTHO05D002168 2.2e-08 62.4 64 48.4
Gorai.013G220700 Gossypium raimondii HOM05D002132 ORTHO05D002168 2.9e-08 62.0 71 49.3
Aqoxy7G03997 Aquilegia oxysepala HOM05D002132 ORTHO05D002168 4.9e-08 61.2 97 35.1
Glyma.06G053800 Glycine max HOM05D002132 ORTHO05D002168 4.9e-08 61.2 73 39.7
VMungo1309G0675 Vigna mungo HOM05D002132 ORTHO05D002168 6.4e-08 60.8 64 48.4
Lj7A255G11 Lonicera japonica HOM05D002132 ORTHO05D002168 8.4e-08 60.5 51 54.9
QL02p000576 Quercus lobata HOM05D002132 ORTHO05D002168 8.4e-08 60.5 64 45.3
vmacro22221 Vaccinium macrocarpon HOM05D002132 ORTHO05D002168 8.4e-08 60.5 76 46.1
QL03p027402 Quercus lobata HOM05D002132 ORTHO05D002168 1.1e-07 60.1 64 43.8
Dinv26916 Davidia involucrata HOM05D002132 ORTHO05D002168 1.4e-07 59.7 82 42.7
Phvul.009G079500 Phaseolus vulgaris HOM05D002132 ORTHO05D002168 1.9e-07 59.3 73 41.1
TAR624G0882 Trochodendron aralioides HOM05D002132 ORTHO05D002168 1.9e-07 59.3 59 49.2
CiPaw.02G137500 Carya illinoinensis HOM05D002132 ORTHO05D002168 4.2e-07 58.2 101 33.7
Gohir.D05G139100 Gossypium hirsutum HOM05D002132 ORTHO05D002168 4.2e-07 58.2 72 44.4
Gorai.009G143400 Gossypium raimondii HOM05D002132 ORTHO05D002168 4.2e-07 58.2 72 44.4
QL02p000561 Quercus lobata HOM05D002132 ORTHO05D002168 4.2e-07 58.2 51 49.0
MBI05_g21324_MAGBIO Magnolia biondii HOM05D002132 ORTHO05D002168 7.1e-07 57.4 81 39.5
Prupe.1G457200 Prunus persica HOM05D002132 ORTHO05D002168 7.1e-07 57.4 45 55.6
Rhsim08G0236600 Rhododendron simsii HOM05D002132 ORTHO05D002168 9.3e-07 57.0 73 38.4
ATR0686G075 Amborella trichopoda HOM05D002132 ORTHO05D002168 1.6e-06 56.2 48 52.1
QL02p000469 Quercus lobata HOM05D002132 ORTHO05D002168 2.1e-06 55.8 50 50.0
FAN27G1082 Fragaria x ananassa HOM05D002132 ORTHO05D002168 2.7e-06 55.5 50 50.0
Thecc.06G116800 Theobroma cacao HOM05D002132 ORTHO05D002168 2.7e-06 55.5 57 49.1
Actinidia32169 Actinidia chinensis HOM05D002132 ORTHO05D002168 3.5e-06 55.1 76 42.1
Zm00001eb240160 Zea mays HOM05D002132 ORTHO05D002168 4.6e-06 54.7 73 37.0


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