Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 5.2e-281 970.3 460 100.0
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 9.5e-251 869.8 460 87.0
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 1.6e-250 869.0 460 86.7
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 5.2e-249 864.0 461 86.6
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 6.8e-249 863.6 461 85.7
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 8.9e-249 863.2 461 86.3
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 2.0e-248 862.1 461 86.8
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 7.5e-248 860.1 461 86.3
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 1.7e-247 859.0 460 85.7
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 2.2e-247 858.6 460 85.9
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 2.4e-246 855.1 461 85.9
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 9.2e-246 853.2 475 82.7
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 2.1e-245 852.0 460 84.1
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 2.1e-245 852.0 460 84.1
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.6e-245 850.9 460 85.0
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 4.6e-245 850.9 460 84.3
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 6.0e-245 850.5 462 85.9
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 1.3e-244 849.4 460 85.9
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 1.3e-244 849.4 460 83.3
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 1.7e-244 849.0 460 84.8
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 5.1e-244 847.4 461 84.8
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 6.6e-244 847.0 460 84.6
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 8.6e-244 846.7 460 85.0
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 1.1e-243 846.3 460 84.3
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 1.9e-243 845.5 460 83.5
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.9e-243 845.5 460 84.3
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 3.3e-243 844.7 460 83.9
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 4.3e-243 844.3 460 84.1
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 5.6e-243 844.0 460 84.1
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 3.6e-242 841.3 460 83.7
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 4.7e-242 840.9 460 83.7
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 8.1e-242 840.1 460 83.0
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 1.1e-241 839.7 460 83.0
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 2.3e-241 838.6 460 83.3
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 3.1e-241 838.2 460 83.5
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 3.1e-241 838.2 460 83.5
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 2.6e-240 835.1 460 83.7
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 3.4e-240 834.7 460 83.0
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 4.4e-240 834.3 460 83.3
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 2.9e-239 831.6 481 80.0
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 1.4e-238 829.3 460 81.3
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 1.4e-238 829.3 460 81.1
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 9.2e-238 826.6 460 82.4
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 9.2e-238 826.6 460 83.3
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 2.1e-237 825.5 460 82.4
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 2.1e-237 825.5 459 81.5
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 3.5e-237 824.7 461 81.8
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 4.6e-237 824.3 460 82.2
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 4.6e-237 824.3 460 82.2
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 4.6e-237 824.3 461 82.4
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 3.0e-236 821.6 462 81.2
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 3.3e-235 818.1 460 80.7
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 3.3e-235 818.1 458 81.4
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 7.3e-235 817.0 460 81.5
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 2.8e-234 815.1 460 80.9
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 6.2e-234 813.9 460 81.7
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 8.1e-234 813.5 460 79.6
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 1.4e-233 812.8 460 81.1
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 3.1e-233 811.6 458 79.3
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 6.8e-233 810.4 460 81.5
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 1.2e-232 809.7 460 81.5
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 3.4e-232 808.1 460 81.3
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 3.4e-232 808.1 460 81.5
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 2.2e-231 805.4 462 78.6
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 3.2e-230 801.6 460 80.7
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 7.1e-230 800.4 455 80.0
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 4.6e-229 797.7 460 80.2
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 7.8e-229 797.0 460 78.9
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 1.3e-228 796.2 460 80.4
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 1.5e-227 792.7 460 78.7
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 7.3e-227 790.4 460 79.8
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 7.3e-227 790.4 443 80.4
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 1.6e-226 789.3 487 76.2
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 8.1e-226 786.9 460 80.0
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 8.4e-223 776.9 460 78.3
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 4.2e-222 774.6 460 78.3
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 2.5e-219 765.4 498 72.9
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 3.3e-219 765.0 460 76.7
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 7.4e-219 763.8 460 78.0
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 4.0e-217 758.1 460 76.5
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 8.4e-215 750.4 458 74.0
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 2.3e-212 742.3 464 72.8
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.8e-209 732.6 460 75.2
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 3.2e-198 695.3 499 65.9
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 2.0e-192 676.0 458 70.3
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.8e-188 662.9 451 65.9
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 3.9e-188 661.8 451 66.3
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 3.3e-187 658.7 455 65.7
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 2.4e-185 652.5 393 75.6
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 3.4e-184 648.7 341 88.6
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 7.2e-182 641.0 338 87.9
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.0e-180 637.1 461 64.0
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 4.8e-178 628.2 338 86.7
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.8e-178 628.2 339 86.1
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.8e-177 626.3 339 86.1
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 5.9e-176 621.3 342 85.1
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 5.9e-176 621.3 342 85.1
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 1.5e-171 606.7 462 59.1
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 7.0e-169 597.8 323 85.1
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 5.9e-168 594.7 337 80.7
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 6.5e-167 591.3 338 81.7
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 6.1e-165 584.7 461 59.0
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.4e-164 583.6 311 86.5
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 4.5e-160 568.5 337 79.2
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 5.4e-145 518.5 302 80.8
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 3.5e-144 515.8 337 74.2
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 5.9e-144 515.0 291 80.1
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 4.3e-142 508.8 309 78.6
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.8e-140 501.5 291 80.4
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 2.0e-139 500.0 277 81.9
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 8.9e-132 474.6 338 63.9
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 9.5e-126 454.5 292 71.6
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 6.7e-103 378.6 450 41.1
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 5.5e-97 359.0 484 37.4
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 7.9e-72 275.4 159 75.5
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.1e-57 228.4 110 93.6
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.1e-57 228.4 110 93.6
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.5e-57 227.3 110 92.7
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 2.9e-50 203.8 185 55.1
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 1.2e-35 155.2 100 75.0
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 7.1e-12 76.3 40 85.0


User provided reference genes

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