Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc10g0004670 Simmondsia chinensis HOM05D006007 ORTHO05D007518 1.9e-204 715.7 373 100.0
Hund15552 Selenicereus undatus HOM05D006007 ORTHO05D007518 7.1e-71 271.9 431 46.4
EL10Ac2g03139 Beta vulgaris HOM05D006007 ORTHO05D007518 1.2e-70 271.2 375 48.8
QL02p067640 Quercus lobata HOM05D006007 ORTHO05D007518 1.6e-67 260.8 401 44.9
TAR264G0002 Trochodendron aralioides HOM05D006007 ORTHO05D007518 2.1e-67 260.4 370 47.8
GSVIVG01032902001 Vitis vinifera HOM05D006007 ORTHO05D007518 1.2e-65 254.6 384 47.1
Dinv34943 Davidia involucrata HOM05D006007 ORTHO05D007518 6.0e-62 242.3 246 58.1
CSS0007202 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 2.3e-61 240.4 361 48.8
Ciclev10011374m.g Citrus clementina HOM05D006007 ORTHO05D007518 3.9e-61 239.6 339 47.2
CSS0026219 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 2.5e-60 236.9 366 47.5
Duzib264G0491 Durio zibethinus HOM05D006007 ORTHO05D007518 2.5e-60 236.9 368 44.6
RcHm_v2.0_Chr2g0165881 Rosa chinensis HOM05D006007 ORTHO05D007518 4.8e-59 232.6 377 44.6
FAN05G3222 Fragaria x ananassa HOM05D006007 ORTHO05D007518 6.2e-59 232.3 374 43.6
TWI32G0586 Tripterygium wilfordii HOM05D006007 ORTHO05D007518 6.2e-59 232.3 368 45.1
AUR62038668 Chenopodium quinoa HOM05D006007 ORTHO05D007518 2.4e-58 230.3 245 55.5
Atru.chr8.458 Acer truncatum HOM05D006007 ORTHO05D007518 4.0e-58 229.6 373 44.0
FAN02G0083 Fragaria x ananassa HOM05D006007 ORTHO05D007518 9.0e-58 228.4 375 44.0
CiPaw.03G088800 Carya illinoinensis HOM05D006007 ORTHO05D007518 2.6e-57 226.9 381 44.6
Eucgr.J01380 Eucalyptus grandis HOM05D006007 ORTHO05D007518 2.6e-57 226.9 365 43.3
FvH4_6g46910 Fragaria vesca HOM05D006007 ORTHO05D007518 3.4e-57 226.5 375 43.7
Phvul.008G033600 Phaseolus vulgaris HOM05D006007 ORTHO05D007518 3.4e-57 226.5 415 41.2
Potri.017G093600 Populus trichocarpa HOM05D006007 ORTHO05D007518 3.4e-57 226.5 373 44.0
AUR62018183 Chenopodium quinoa HOM05D006007 ORTHO05D007518 4.5e-57 226.1 244 54.5
FAN09G0451 Fragaria x ananassa HOM05D006007 ORTHO05D007518 7.6e-57 225.3 374 43.3
Glyma.18G266400 Glycine max HOM05D006007 ORTHO05D007518 7.6e-57 225.3 419 41.8
Manes.02G054700 Manihot esculenta HOM05D006007 ORTHO05D007518 1.0e-56 224.9 393 41.5
Gorai.007G082800 Gossypium raimondii HOM05D006007 ORTHO05D007518 1.7e-56 224.2 397 42.8
Cfa007665 Carpinus fangiana HOM05D006007 ORTHO05D007518 4.9e-56 222.6 379 44.3
Lj1g0023913 Lotus japonicus HOM05D006007 ORTHO05D007518 4.9e-56 222.6 430 41.4
MD09G1066400 Malus domestica HOM05D006007 ORTHO05D007518 1.4e-55 221.1 353 46.7
Gohir.A11G072800 Gossypium hirsutum HOM05D006007 ORTHO05D007518 7.1e-55 218.8 396 43.2
Nn4g23426 Nelumbo nucifera HOM05D006007 ORTHO05D007518 1.2e-54 218.0 376 41.5
Ah.10g032260 Amaranthus hybridus HOM05D006007 ORTHO05D007518 3.5e-54 216.5 245 54.3
Ca_04352_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 3.5e-54 216.5 455 38.5
Cc07_g04190 Coffea canephora HOM05D006007 ORTHO05D007518 4.6e-54 216.1 368 42.4
Hma1.2p1_0481F.1_g162140 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 7.9e-54 215.3 361 43.2
Hma1.2p1_0481F.1_g162150 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 7.9e-54 215.3 361 43.2
Sabra17G0082500 Salix brachista HOM05D006007 ORTHO05D007518 1.0e-53 214.9 373 40.5
CANSAT64G1701 Cannabis sativa HOM05D006007 ORTHO05D007518 3.0e-53 213.4 396 43.7
FAN14G4567 Fragaria x ananassa HOM05D006007 ORTHO05D007518 3.0e-53 213.4 395 41.3
Cpa.g.sc14.172 Carica papaya HOM05D006007 ORTHO05D007518 1.1e-52 211.5 232 53.0
PSO017G6380 Papaver somniferum HOM05D006007 ORTHO05D007518 1.1e-52 211.5 377 41.6
Gohir.D11G077100 Gossypium hirsutum HOM05D006007 ORTHO05D007518 1.9e-52 210.7 397 41.6
Prupe.3G255200 Prunus persica HOM05D006007 ORTHO05D007518 5.7e-52 209.1 271 50.9
Thecc.04G095300 Theobroma cacao HOM05D006007 ORTHO05D007518 5.7e-52 209.1 344 43.0
CDE02G4269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 2.2e-51 207.2 371 41.0
vmacro05632 Vaccinium macrocarpon HOM05D006007 ORTHO05D007518 2.2e-51 207.2 365 43.8
Glyma.08G245100 Glycine max HOM05D006007 ORTHO05D007518 2.8e-51 206.8 290 48.3
CiPaw.04G055900 Carya illinoinensis HOM05D006007 ORTHO05D007518 3.7e-51 206.5 245 53.1
Lalb_Chr17g0337001 Lupinus albus HOM05D006007 ORTHO05D007518 3.7e-51 206.5 414 38.4
Aqoxy3G03693 Aquilegia oxysepala HOM05D006007 ORTHO05D007518 4.8e-51 206.1 376 43.1
Oeu004412.3 Olea europaea HOM05D006007 ORTHO05D007518 6.3e-51 205.7 408 40.9
Medtr7g013700 Medicago truncatula HOM05D006007 ORTHO05D007518 3.1e-50 203.4 397 40.8
Ca_30479_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 6.9e-50 202.2 303 45.5
Haze_14433 Corylus avellana HOM05D006007 ORTHO05D007518 9.0e-50 201.8 246 52.8
DCAR_005549 Daucus carota HOM05D006007 ORTHO05D007518 1.2e-49 201.4 380 39.7
FAN05G2596 Fragaria x ananassa HOM05D006007 ORTHO05D007518 1.0e-48 198.4 247 51.4
PSO478G1877 Papaver somniferum HOM05D006007 ORTHO05D007518 1.0e-48 198.4 375 41.3
Nitab4.5_0000212g0230 Nicotiana tabacum HOM05D006007 ORTHO05D007518 1.7e-48 197.6 362 42.5
PGSC0003DMG400025145 Solanum tuberosum HOM05D006007 ORTHO05D007518 6.5e-48 195.7 369 42.0
ECA246G0757 Erigeron canadensis HOM05D006007 ORTHO05D007518 5.5e-47 192.6 367 40.9
BraA02t08659Z Brassica rapa HOM05D006007 ORTHO05D007518 7.2e-47 192.2 351 41.6
A02p36640 Brassica napus HOM05D006007 ORTHO05D007518 9.4e-47 191.8 351 41.6
Solyc02g066940.4 Solanum lycopersicum HOM05D006007 ORTHO05D007518 1.6e-46 191.0 369 42.0
MSTRG.23885 Avicennia marina HOM05D006007 ORTHO05D007518 7.9e-46 188.7 355 42.0
COL.COLO4_07027 Corchorus olitorius HOM05D006007 ORTHO05D007518 7.9e-46 188.7 245 49.0
THA.LOC104823889 Tarenaya hassleriana HOM05D006007 ORTHO05D007518 2.3e-45 187.2 383 42.0
HanXRQChr17g0546081 Helianthus annuus HOM05D006007 ORTHO05D007518 2.5e-44 183.7 358 39.9
CAN.G398.20 Capsicum annuum HOM05D006007 ORTHO05D007518 3.3e-44 183.3 369 40.1
Sp2g17990 Schrenkiella parvula HOM05D006007 ORTHO05D007518 3.3e-44 183.3 353 41.4
Sopen02g016130 Solanum pennellii HOM05D006007 ORTHO05D007518 4.3e-44 183.0 246 48.4
C02p55600 Brassica napus HOM05D006007 ORTHO05D007518 1.7e-43 181.0 350 39.7
BolC2t11616H Brassica oleracea HOM05D006007 ORTHO05D007518 1.7e-43 181.0 350 39.7
Aa31LG2G3900 Aethionema arabicum HOM05D006007 ORTHO05D007518 2.2e-43 180.6 342 42.4
BcaC03g17580 Brassica carinata HOM05D006007 ORTHO05D007518 6.3e-43 179.1 350 39.4
MBI19_g00630_MAGBIO Magnolia biondii HOM05D006007 ORTHO05D007518 1.4e-42 177.9 368 36.4
BcaB07g30079 Brassica carinata HOM05D006007 ORTHO05D007518 4.1e-42 176.4 352 38.9
Sed0005820 Sechium edule HOM05D006007 ORTHO05D007518 4.1e-42 176.4 403 37.2
Thhalv10003901m.g Eutrema salsugineum HOM05D006007 ORTHO05D007518 6.9e-42 175.6 352 40.6
arahy.Tifrunner.gnm1.ann1.EQE0CJ Arachis hypogaea HOM05D006007 ORTHO05D007518 2.6e-41 173.7 309 40.5
arahy.Tifrunner.gnm1.ann1.J3LTHX Arachis hypogaea HOM05D006007 ORTHO05D007518 2.6e-41 173.7 309 40.5
Peaxi162Scf00991g00329 Petunia axillaris HOM05D006007 ORTHO05D007518 5.0e-40 169.5 246 45.5
AT3G29390 Arabidopsis thaliana HOM05D006007 ORTHO05D007518 1.1e-39 168.3 235 46.4
Migut.H00628 Erythranthe guttata HOM05D006007 ORTHO05D007518 1.1e-39 168.3 245 48.6
ATR0177G014 Amborella trichopoda HOM05D006007 ORTHO05D007518 1.4e-39 167.9 253 43.9
HPP92_007829 Vanilla planifolia HOM05D006007 ORTHO05D007518 1.4e-39 167.9 420 34.5
Carub.0005s0814 Capsella rubella HOM05D006007 ORTHO05D007518 1.2e-38 164.9 373 36.7
AL5G19590 Arabidopsis lyrata HOM05D006007 ORTHO05D007518 2.1e-38 164.1 241 44.8
MELO3C022635.2 Cucumis melo HOM05D006007 ORTHO05D007518 1.8e-37 161.0 424 34.2
Psat3g201920 Pisum sativum HOM05D006007 ORTHO05D007518 2.3e-37 160.6 263 43.7
Lj4A118G52 Lonicera japonica HOM05D006007 ORTHO05D007518 1.5e-36 157.9 362 35.4
CsaV3_4G009190 Cucumis sativus L. HOM05D006007 ORTHO05D007518 2.6e-36 157.1 292 39.7
ClCG07G016350 Citrullus lanatus HOM05D006007 ORTHO05D007518 4.8e-35 152.9 298 36.6
unitig_52.g17640 Utricularia gibba HOM05D006007 ORTHO05D007518 8.2e-35 152.1 353 35.4
Nitab4.5_0010627g0030 Nicotiana tabacum HOM05D006007 ORTHO05D007518 1.4e-34 151.4 363 38.6
SalBow1G7079 Salvia bowleyana HOM05D006007 ORTHO05D007518 2.4e-34 150.6 248 44.8
Zm00001eb008620 Zea mays HOM05D006007 ORTHO05D007518 2.4e-34 150.6 310 36.1
PGR004G1158 Punica granatum HOM05D006007 ORTHO05D007518 5.9e-33 146.0 248 42.7
Rhsim10G0048800 Rhododendron simsii HOM05D006007 ORTHO05D007518 7.7e-33 145.6 348 34.5
Lsat_1_v5_gn_3_97780 Lactuca sativa HOM05D006007 ORTHO05D007518 7.2e-31 139.0 363 33.9
Oeu051018.1 Olea europaea HOM05D006007 ORTHO05D007518 4.7e-30 136.3 245 42.9
SEGI_40404 Sequoiadendron giganteum HOM05D006007 ORTHO05D007518 4.5e-25 119.8 362 30.1
TPR.G33475 Trifolium pratense HOM05D006007 ORTHO05D007518 2.3e-21 107.5 71 71.8
Mapoly0218s0012 Marchantia polymorpha HOM05D006007 ORTHO05D007518 4.1e-18 96.7 376 31.6
CDE05G3437 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 1.3e-16 91.7 211 34.1
SHI25685 Sapria himalayana HOM05D006007 ORTHO05D007518 3.2e-15 87.0 68 64.7
HPP92_007749 Vanilla planifolia HOM05D006007 ORTHO05D007518 4.7e-14 83.2 57 70.2
BolC2t11584H Brassica oleracea HOM05D006007 ORTHO05D007518 1.4e-13 81.6 72 61.1
Pp3c3_22820 Physcomitrium patens HOM05D006007 ORTHO05D007518 3.0e-13 80.5 106 45.3
CBR_g19543 Chara braunii HOM05D006007 ORTHO05D007518 6.8e-13 79.3 127 37.8
MBI15_g14467_MAGBIO Magnolia biondii HOM05D003623 ORTHO05D007518 4.4e-12 76.6 168 36.3
BcaC03g17562 Brassica carinata HOM05D006007 ORTHO05D007518 1.7e-11 74.7 222 31.1
HPP92_007750 Vanilla planifolia HOM05D006007 ORTHO05D007518 3.6e-06 57.0 81 46.9


User provided reference genes

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