Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 1.8e-102 375.9 188 100.0
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 4.9e-60 235.0 188 67.6
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 1.1e-56 223.8 182 65.4
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 5.6e-56 221.5 196 61.2
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 5.6e-56 221.5 149 73.2
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 1.2e-55 220.3 129 81.4
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 8.0e-55 217.6 189 61.9
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 1.0e-54 217.2 148 73.0
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 1.4e-54 216.9 129 82.2
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 1.4e-54 216.9 163 69.3
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 4.0e-54 215.3 161 68.3
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 5.2e-54 214.9 136 72.1
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 6.8e-54 214.5 131 78.6
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 6.8e-54 214.5 146 72.6
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 1.2e-53 213.8 128 79.7
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 1.5e-53 213.4 129 79.8
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 1.5e-53 213.4 129 80.6
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 7.5e-53 211.1 124 81.5
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 1.7e-52 209.9 124 80.6
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 4.9e-52 208.4 173 62.4
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 4.9e-52 208.4 146 70.5
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 4.9e-52 208.4 124 79.8
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 6.4e-52 208.0 128 77.3
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 8.3e-52 207.6 174 63.8
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 8.3e-52 207.6 139 72.7
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.4e-51 206.1 173 61.8
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 2.4e-51 206.1 145 69.7
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 2.4e-51 206.1 146 70.5
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 2.4e-51 206.1 191 60.7
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 3.2e-51 205.7 189 63.5
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 7.0e-51 204.5 147 71.4
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 7.0e-51 204.5 203 58.6
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 9.2e-51 204.1 149 70.5
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 1.2e-50 203.8 159 64.2
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 2.0e-50 203.0 125 76.0
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 2.0e-50 203.0 190 62.1
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 2.7e-50 202.6 147 69.4
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 2.7e-50 202.6 148 67.6
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 3.5e-50 202.2 195 61.0
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 3.5e-50 202.2 157 65.6
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.5e-50 202.2 141 74.5
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 4.6e-50 201.8 140 74.3
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 4.6e-50 201.8 189 59.8
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 5.9e-50 201.4 140 75.0
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 5.9e-50 201.4 140 75.0
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 5.9e-50 201.4 143 69.2
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 5.9e-50 201.4 137 71.5
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 5.9e-50 201.4 127 75.6
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 7.8e-50 201.1 160 66.2
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 2.3e-49 199.5 177 60.5
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 1.1e-48 197.2 127 74.0
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 1.5e-48 196.8 145 65.5
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 1.9e-48 196.4 176 58.5
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 2.1e-47 193.0 129 76.0
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 2.1e-47 193.0 129 76.0
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 2.1e-47 193.0 109 79.8
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 3.6e-47 192.2 120 76.7
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 4.7e-47 191.8 139 66.9
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 6.2e-47 191.4 131 74.0
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 8.0e-47 191.0 129 75.2
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 8.0e-47 191.0 129 75.2
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 8.0e-47 191.0 129 75.2
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 1.1e-46 190.7 127 74.8
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 1.1e-46 190.7 133 72.9
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 1.1e-46 190.7 133 72.9
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 1.1e-46 190.7 129 74.4
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 1.1e-46 190.7 161 62.1
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 1.4e-46 190.3 190 54.2
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 1.4e-46 190.3 129 73.6
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 2.3e-46 189.5 150 64.7
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 3.1e-46 189.1 127 73.2
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 3.1e-46 189.1 131 73.3
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 3.1e-46 189.1 129 72.1
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 3.1e-46 189.1 117 76.1
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 3.1e-46 189.1 110 78.2
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 6.8e-46 188.0 132 70.5
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 8.9e-46 187.6 130 73.1
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 1.2e-45 187.2 127 73.2
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 1.5e-45 186.8 146 65.1
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 1.5e-45 186.8 129 72.9
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 2.6e-45 186.0 118 73.7
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 4.4e-45 185.3 139 66.9
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 5.8e-45 184.9 137 69.3
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 9.8e-45 184.1 107 84.1
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 9.8e-45 184.1 140 65.7
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 9.8e-45 184.1 145 65.5
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 1.7e-44 183.3 178 56.7
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 1.7e-44 183.3 145 65.5
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 2.2e-44 183.0 123 76.4
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 2.2e-44 183.0 191 56.5
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 3.7e-44 182.2 133 66.9
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 1.4e-43 180.3 144 63.9
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 1.9e-43 179.9 193 52.8
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 1.9e-43 179.9 131 65.6
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 2.4e-43 179.5 178 56.7
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 2.4e-43 179.5 114 74.6
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 4.1e-43 178.7 118 71.2
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 3.5e-42 175.6 128 68.0
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 4.6e-42 175.3 130 66.2
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 5.0e-41 171.8 131 67.2
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 7.3e-40 167.9 114 64.9
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 1.2e-39 167.2 135 65.9
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 2.8e-39 166.0 133 62.4
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 4.7e-39 165.2 150 60.0
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 3.1e-38 162.5 120 68.3
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 9.9e-37 157.5 154 57.1
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 1.7e-36 156.8 125 65.6
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 1.4e-35 153.7 165 55.8
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 1.4e-35 153.7 113 67.3
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 1.4e-35 153.7 120 65.0
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 2.1e-34 149.8 87 79.3
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 1.3e-33 147.1 109 60.6
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 1.1e-32 144.1 124 62.9
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.5e-32 143.7 122 62.3
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 7.3e-32 141.4 123 54.5
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 1.5e-29 133.7 122 48.4
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 3.4e-29 132.5 143 48.3
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 9.9e-29 131.0 123 49.6
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 7.1e-19 98.2 117 47.0
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 1.6e-15 87.0 66 65.2
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 1.8e-14 83.6 99 46.5
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 5.3e-14 82.0 51 70.6
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 4.6e-10 68.9 60 58.3
PRCOL_00002065 Prasinoderma coloniale HOM05D006312 ORTHO05D007843 9.6e-08 61.2 80 45.0
QL11p010710 Quercus lobata HOM05D006312 ORTHO05D007843 4.0e-06 55.8 55 52.7
Manes.01G158400 Manihot esculenta HOM05D006312 ORTHO05D007843 6.9e-06 55.1 62 51.6


User provided reference genes

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