Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 4.2e-173 611.3 314 100.0
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 6.4e-97 358.2 291 66.7
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 1.0e-91 340.9 298 62.8
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 8.3e-89 331.3 294 60.5
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 1.2e-87 327.4 263 66.9
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 3.5e-87 325.9 291 60.5
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 4.6e-87 325.5 239 70.3
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 7.8e-87 324.7 254 65.7
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 7.8e-87 324.7 268 64.2
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 1.0e-86 324.3 233 71.2
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 1.3e-86 323.9 297 58.9
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 2.3e-86 323.2 251 66.9
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 3.0e-86 322.8 290 61.0
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 3.9e-86 322.4 291 59.1
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.5e-85 320.5 300 59.3
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 1.5e-85 320.5 301 59.5
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 1.9e-85 320.1 291 60.5
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 3.3e-85 319.3 309 57.6
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 3.3e-85 319.3 309 57.3
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 4.3e-85 318.9 269 62.1
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 4.3e-85 318.9 307 59.0
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 7.3e-85 318.2 295 60.0
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 9.5e-85 317.8 237 69.2
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 1.2e-84 317.4 262 63.7
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 2.1e-84 316.6 290 59.7
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 3.6e-84 315.8 289 59.2
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 4.7e-84 315.5 296 58.1
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 4.7e-84 315.5 295 59.7
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 6.2e-84 315.1 280 60.7
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 6.2e-84 315.1 262 63.4
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 6.2e-84 315.1 283 60.8
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 8.1e-84 314.7 281 60.5
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 2.3e-83 313.2 261 62.8
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 5.2e-83 312.0 238 66.0
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 8.9e-83 311.2 238 66.8
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 8.9e-83 311.2 280 58.6
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 1.2e-82 310.8 281 60.1
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 1.5e-82 310.5 288 56.6
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 2.0e-82 310.1 286 58.0
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 4.4e-82 308.9 287 58.2
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 7.5e-82 308.1 238 64.7
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 7.5e-82 308.1 263 61.6
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 9.8e-82 307.8 238 64.7
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.7e-81 307.0 317 55.2
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 1.7e-81 307.0 239 63.2
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 1.7e-81 307.0 286 57.3
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 2.2e-81 306.6 298 57.4
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 3.7e-81 305.8 239 63.2
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 4.9e-81 305.4 232 67.2
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 4.9e-81 305.4 232 66.4
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 4.9e-81 305.4 232 66.4
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 1.9e-80 303.5 235 63.0
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 3.2e-80 302.8 240 65.0
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 4.1e-80 302.4 238 64.3
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 5.4e-80 302.0 238 64.3
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 7.1e-80 301.6 334 53.3
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 7.1e-80 301.6 288 53.5
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 9.2e-80 301.2 221 68.8
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 1.6e-79 300.4 251 62.5
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 1.6e-79 300.4 238 62.6
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 3.5e-79 299.3 280 57.1
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 4.6e-79 298.9 240 63.3
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 4.6e-79 298.9 240 62.9
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 4.6e-79 298.9 287 57.8
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 7.8e-79 298.1 244 63.9
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 1.0e-78 297.7 295 55.9
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 2.3e-78 296.6 240 62.5
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 2.3e-78 296.6 240 62.5
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 2.3e-78 296.6 240 62.5
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 2.3e-78 296.6 240 62.5
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 2.3e-78 296.6 240 62.5
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 2.3e-78 296.6 261 60.2
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 2.3e-78 296.6 236 63.1
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 3.0e-78 296.2 238 63.4
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 3.9e-78 295.8 240 62.9
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 3.9e-78 295.8 248 61.3
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 3.9e-78 295.8 302 55.0
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 6.6e-78 295.0 240 62.9
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 1.1e-77 294.3 254 60.2
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 1.5e-77 293.9 289 56.4
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 1.5e-77 293.9 238 63.4
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 1.9e-77 293.5 240 62.1
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 1.9e-77 293.5 240 62.1
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 1.9e-77 293.5 245 62.4
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 1.9e-77 293.5 240 62.9
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 3.3e-77 292.7 238 62.6
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 4.3e-77 292.4 242 62.8
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 1.2e-76 290.8 240 61.2
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 3.6e-76 289.3 238 62.2
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 6.2e-76 288.5 246 60.6
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 5.2e-75 285.4 284 54.9
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 1.5e-74 283.9 233 61.8
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 1.4e-72 277.3 225 62.2
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 4.1e-72 275.8 332 48.5
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 1.3e-70 270.8 233 59.7
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 3.9e-70 269.2 249 56.6
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 1.7e-65 253.8 276 52.2
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 7.8e-63 245.0 157 74.5
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 2.5e-61 240.0 287 49.5
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 1.3e-60 237.7 258 52.7
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 4.4e-58 229.2 286 50.0
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 2.2e-57 226.9 143 76.2
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 1.3e-46 191.0 218 45.9
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 5.1e-46 189.1 232 44.8
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 1.1e-45 188.0 286 42.7
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 3.3e-45 186.4 130 66.2
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 3.3e-45 186.4 147 60.5
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 1.3e-44 184.5 224 43.3
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 5.3e-43 179.1 194 47.9
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 1.5e-42 177.6 149 58.4
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 6.0e-39 165.6 207 47.8
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 1.1e-37 161.4 204 43.1
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 4.3e-37 159.5 135 59.3
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 4.1e-35 152.9 87 79.3
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 9.7e-29 131.7 136 55.1
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 1.1e-24 118.2 92 69.6
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 1.8e-22 110.9 107 61.7
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 2.6e-18 97.1 91 51.6
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 3.8e-17 93.2 50 86.0
Atru.chr6.2294 Acer truncatum HOM05D006484 ORTHO05D008002 1.6e-15 87.8 90 54.4
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 8.8e-14 82.0 186 30.6
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 1.7e-12 77.8 48 70.8
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 1.6e-07 61.2 34 79.4
MD09G1034700 Malus domestica HOM05D006484 ORTHO05D008002 8.8e-06 55.5 71 43.7


User provided reference genes

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