Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 6.9e-164 580.5 277 100.0
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 3.3e-97 359.0 277 58.5
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 5.6e-97 358.2 275 60.7
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 1.6e-96 356.7 270 61.5
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 6.2e-96 354.8 276 62.7
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 2.4e-95 352.8 274 60.6
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 4.9e-93 345.1 276 57.6
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 1.9e-92 343.2 275 59.6
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 1.9e-92 343.2 275 59.3
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 2.4e-92 342.8 274 56.6
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 3.2e-92 342.4 273 59.3
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 3.2e-92 342.4 273 60.4
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 7.1e-92 341.3 271 58.7
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 9.3e-92 340.9 273 58.6
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 9.3e-92 340.9 276 56.5
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 1.3e-90 337.0 270 57.4
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 1.7e-90 336.7 271 56.5
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 1.7e-90 336.7 310 52.3
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 3.0e-90 335.9 310 52.3
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 6.6e-90 334.7 250 62.8
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 1.1e-89 334.0 273 57.5
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 1.1e-89 334.0 274 58.4
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 9.6e-89 330.9 273 59.0
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 1.3e-88 330.5 274 52.9
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 1.3e-88 330.5 276 54.3
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 3.6e-88 328.9 252 58.3
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 4.8e-88 328.6 251 57.8
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 6.2e-88 328.2 275 54.9
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 6.2e-88 328.2 275 56.7
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 1.4e-87 327.0 252 57.9
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 2.4e-87 326.2 275 57.1
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 4.0e-87 325.5 252 58.7
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 4.0e-87 325.5 278 57.6
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 5.3e-87 325.1 274 54.4
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 6.9e-87 324.7 276 54.0
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 1.2e-86 323.9 273 54.9
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 1.2e-86 323.9 272 55.1
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 3.4e-86 322.4 271 57.9
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 7.6e-86 321.2 275 56.4
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 7.6e-86 321.2 272 55.1
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 9.9e-86 320.9 271 53.9
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 2.2e-85 319.7 270 55.6
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 2.2e-85 319.7 273 54.2
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 3.8e-85 318.9 274 54.0
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 6.4e-85 318.2 275 53.1
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 2.4e-84 316.2 251 61.8
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 4.2e-84 315.5 278 52.9
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 7.1e-84 314.7 227 65.6
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 9.3e-84 314.3 281 54.4
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 2.1e-83 313.2 274 55.1
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 2.1e-83 313.2 274 54.7
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 2.1e-83 313.2 291 53.6
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 6.0e-83 311.6 279 54.5
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 6.0e-83 311.6 242 62.8
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 5.1e-82 308.5 294 51.0
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 6.6e-82 308.1 249 56.6
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 5.6e-81 305.1 330 50.0
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 4.0e-79 298.9 233 64.8
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 6.9e-79 298.1 271 52.0
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 9.0e-79 297.7 274 51.1
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 1.2e-78 297.4 273 50.9
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 3.4e-78 295.8 332 45.5
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 1.3e-77 293.9 281 51.6
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 2.9e-77 292.7 271 50.2
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 2.9e-77 292.7 273 50.2
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 1.1e-76 290.8 275 51.6
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 1.9e-76 290.0 253 52.6
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 4.2e-76 288.9 259 52.5
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 5.5e-76 288.5 273 49.8
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 7.1e-76 288.1 269 49.4
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 1.2e-75 287.3 258 51.2
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 1.6e-75 287.0 329 43.2
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 2.7e-75 286.2 307 45.3
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 1.8e-74 283.5 270 49.3
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 3.0e-74 282.7 234 56.0
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 8.7e-74 281.2 272 52.2
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 1.9e-73 280.0 278 48.2
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 2.5e-73 279.6 270 48.9
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 3.3e-73 279.3 272 48.9
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 4.3e-73 278.9 279 51.6
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 9.0e-71 271.2 370 38.6
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 2.9e-69 266.2 257 48.2
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 9.3e-68 261.2 207 58.5
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 2.7e-67 259.6 223 53.8
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 2.7e-67 259.6 206 60.2
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 7.9e-67 258.1 202 58.4
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 1.3e-66 257.3 200 55.5
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 8.7e-66 254.6 202 58.4
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 8.7e-66 254.6 200 54.5
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 1.1e-65 254.2 207 57.0
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 3.3e-65 252.7 275 45.1
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 6.3e-64 248.4 202 56.9
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 1.8e-63 246.9 272 46.3
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 2.4e-63 246.5 279 45.2
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 3.1e-63 246.1 270 47.8
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 6.5e-61 238.4 193 58.0
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 1.4e-60 237.3 333 40.5
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 9.3e-60 234.6 219 51.6
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 1.3e-58 230.7 283 41.3
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 3.0e-58 229.6 225 53.8
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 3.9e-58 229.2 202 55.9
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 1.1e-55 221.1 207 49.8
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 1.4e-55 220.7 184 53.3
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 3.2e-52 209.5 180 51.7
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 1.5e-49 200.7 351 33.3
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 1.5e-49 200.7 283 39.2
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 1.3e-45 187.6 279 37.6
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 3.8e-45 186.0 183 49.2
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 3.3e-41 172.9 130 65.4
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 6.7e-34 148.7 178 42.1
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 5.9e-30 135.6 156 39.7
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 4.0e-26 122.9 170 40.0
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 4.0e-26 122.9 177 40.7
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 5.0e-21 105.9 127 44.9
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 1.9e-20 104.0 160 40.6
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 5.7e-17 92.4 92 51.1
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 3.7e-16 89.7 251 25.1
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 1.2e-14 84.7 73 49.3
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 2.8e-11 73.6 57 56.1
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 2.7e-06 57.0 73 39.7


User provided reference genes

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