Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 4.3e-107 391.3 200 100.0
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 2.7e-48 196.1 192 56.8
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 1.3e-47 193.7 182 58.8
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 1.9e-46 189.9 218 50.9
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 2.5e-46 189.5 146 70.5
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 5.5e-46 188.3 184 58.7
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 5.5e-46 188.3 146 69.9
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 4.7e-45 185.3 146 68.5
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 6.1e-45 184.9 200 53.0
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 8.0e-45 184.5 171 57.9
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 1.0e-44 184.1 146 69.2
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 8.9e-44 181.0 171 59.6
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 1.2e-43 180.6 146 67.8
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 1.5e-43 180.3 140 68.6
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 3.7e-42 175.6 146 66.4
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 4.9e-42 175.3 143 64.3
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 8.3e-42 174.5 146 63.0
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 2.4e-41 172.9 146 61.6
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 3.1e-41 172.6 122 73.0
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 3.1e-41 172.6 147 63.9
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 3.1e-41 172.6 144 64.6
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 4.1e-41 172.2 166 55.4
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 5.4e-41 171.8 143 62.2
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 7.0e-41 171.4 211 48.8
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 1.2e-40 170.6 133 66.2
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 2.0e-40 169.9 138 63.0
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 2.7e-40 169.5 122 72.1
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 2.7e-40 169.5 144 62.5
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 3.5e-40 169.1 144 63.9
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 5.9e-40 168.3 145 63.4
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 2.3e-39 166.4 146 63.7
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 2.3e-39 166.4 147 59.2
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 2.3e-39 166.4 136 62.5
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 2.9e-39 166.0 146 63.0
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 5.0e-39 165.2 146 63.0
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 8.6e-39 164.5 146 63.0
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 8.6e-39 164.5 196 51.0
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 1.1e-38 164.1 146 61.6
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 1.9e-38 163.3 181 56.9
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 1.9e-38 163.3 133 66.2
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 2.5e-38 162.9 178 54.5
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 3.3e-38 162.5 137 65.7
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 5.6e-38 161.8 172 56.4
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 5.6e-38 161.8 141 62.4
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 1.2e-37 160.6 224 46.9
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 2.8e-37 159.5 180 50.0
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 2.8e-37 159.5 164 54.9
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 3.6e-37 159.1 141 61.0
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 6.1e-37 158.3 149 57.7
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 6.1e-37 158.3 116 68.1
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 1.0e-36 157.5 184 51.1
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 1.4e-36 157.1 182 50.5
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 3.0e-36 156.0 158 54.4
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 3.0e-36 156.0 148 59.5
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 3.0e-36 156.0 144 61.8
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 5.2e-36 155.2 146 58.9
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 6.8e-36 154.8 216 41.7
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 6.8e-36 154.8 146 56.2
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 8.9e-36 154.5 145 55.9
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 8.9e-36 154.5 145 62.8
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 2.0e-35 153.3 106 71.7
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 2.0e-35 153.3 106 71.7
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 2.6e-35 152.9 131 62.6
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 2.6e-35 152.9 183 49.7
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 2.6e-35 152.9 145 59.3
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 2.6e-35 152.9 193 50.3
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 2.6e-35 152.9 138 62.3
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 3.4e-35 152.5 144 61.1
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 5.8e-35 151.8 147 55.8
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 7.5e-35 151.4 173 52.0
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 7.5e-35 151.4 146 59.6
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 9.8e-35 151.0 203 46.3
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 9.8e-35 151.0 143 61.5
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 3.7e-34 149.1 116 62.9
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 3.7e-34 149.1 116 62.9
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 3.7e-34 149.1 116 62.9
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 3.7e-34 149.1 116 62.9
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 8.3e-34 147.9 138 58.0
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 8.3e-34 147.9 138 58.0
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 1.1e-33 147.5 155 54.2
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 2.4e-33 146.4 138 57.2
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 3.2e-33 146.0 180 51.1
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 3.2e-33 146.0 147 53.7
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 7.0e-33 144.8 147 57.8
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 9.2e-33 144.4 225 41.3
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 1.2e-32 144.1 180 50.6
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 1.2e-32 144.1 180 50.6
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.2e-32 144.1 180 50.6
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 2.7e-32 142.9 183 48.6
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 2.7e-32 142.9 115 65.2
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 3.5e-32 142.5 174 46.6
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 3.9e-31 139.0 134 61.9
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 3.9e-31 139.0 225 39.6
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 6.6e-31 138.3 228 43.4
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 8.6e-31 137.9 119 63.0
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 5.6e-30 135.2 171 52.0
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 2.1e-29 133.3 149 54.4
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 2.8e-29 132.9 144 50.0
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 1.4e-28 130.6 98 70.4
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 3.1e-28 129.4 160 50.6
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 6.8e-28 128.3 138 54.3
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 4.4e-27 125.6 140 55.0
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 1.3e-23 114.0 106 59.4
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 1.5e-22 110.5 159 44.0
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 9.5e-22 107.8 125 49.6
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 2.1e-21 106.7 83 60.2
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 1.3e-18 97.4 159 44.0
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 2.7e-16 89.7 127 45.7
Mapoly0147s0009 Marchantia polymorpha HOM05D007292 ORTHO05D009084 9.6e-06 54.7 86 39.5


User provided reference genes

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