Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc10g0000620 Simmondsia chinensis HOM05D007430 ORTHO05D009322 1.5e-62 242.7 118 100.0
Hund13678 Selenicereus undatus HOM05D007430 ORTHO05D009322 6.2e-37 157.5 114 67.5
Eucgr.C00827 Eucalyptus grandis HOM05D007430 ORTHO05D009322 6.8e-36 154.1 111 64.9
HanXRQChr14g0452451 Helianthus annuus HOM05D007430 ORTHO05D009322 1.5e-35 152.9 110 67.3
ECA238G2295 Erigeron canadensis HOM05D007430 ORTHO05D009322 5.8e-35 151.0 110 64.5
Duzib138G0563 Durio zibethinus HOM05D007430 ORTHO05D009322 4.9e-34 147.9 109 63.3
RcHm_v2.0_Chr2g0164961 Rosa chinensis HOM05D007430 ORTHO05D009322 4.9e-34 147.9 111 61.3
EL10Ac8g20552 Beta vulgaris HOM05D007430 ORTHO05D009322 6.4e-34 147.5 117 59.8
FAN14G5598 Fragaria x ananassa HOM05D007430 ORTHO05D009322 2.4e-33 145.6 111 61.3
Thecc.04G105400 Theobroma cacao HOM05D007430 ORTHO05D009322 4.1e-33 144.8 109 62.4
GSVIVG01037660001 Vitis vinifera HOM05D007430 ORTHO05D009322 4.1e-33 144.8 111 60.4
Ciclev10013162m.g Citrus clementina HOM05D007430 ORTHO05D009322 5.4e-33 144.4 109 62.4
FAN05G2487 Fragaria x ananassa HOM05D007430 ORTHO05D009322 5.4e-33 144.4 111 61.3
CsaV3_4G010120 Cucumis sativus L. HOM05D007430 ORTHO05D009322 9.2e-33 143.7 108 59.3
PGR004G1880 Punica granatum HOM05D007430 ORTHO05D009322 1.2e-32 143.3 111 61.3
Potri.017G099600 Populus trichocarpa HOM05D007430 ORTHO05D009322 2.1e-32 142.5 111 57.7
MELO3C032688.2 Cucumis melo HOM05D007430 ORTHO05D009322 2.7e-32 142.1 109 58.7
AUR62023164 Chenopodium quinoa HOM05D007430 ORTHO05D009322 3.5e-32 141.7 116 59.5
Dinv33859 Davidia involucrata HOM05D007430 ORTHO05D009322 3.5e-32 141.7 110 59.1
Aqoxy3G00539 Aquilegia oxysepala HOM05D007430 ORTHO05D009322 4.6e-32 141.4 110 61.8
FAN09G2572 Fragaria x ananassa HOM05D007430 ORTHO05D009322 4.6e-32 141.4 109 60.6
Lsat_1_v5_gn_2_89680 Lactuca sativa HOM05D007430 ORTHO05D009322 4.6e-32 141.4 110 60.9
Sed0003360 Sechium edule HOM05D007430 ORTHO05D009322 4.6e-32 141.4 108 60.2
Gohir.D07G186800 Gossypium hirsutum HOM05D007430 ORTHO05D009322 6.0e-32 141.0 114 57.9
Gorai.001G207400 Gossypium raimondii HOM05D007430 ORTHO05D009322 6.0e-32 141.0 114 57.9
MD17G1065300 Malus domestica HOM05D007430 ORTHO05D009322 6.0e-32 141.0 112 57.1
Sabra17G0085900 Salix brachista HOM05D007430 ORTHO05D009322 6.0e-32 141.0 110 57.3
CSS0032789 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 7.8e-32 140.6 112 60.7
CSS0049466 Camellia sinensis var. sinensis HOM05D007430 ORTHO05D009322 7.8e-32 140.6 112 60.7
Prupe.3G249500 Prunus persica HOM05D007430 ORTHO05D009322 1.3e-31 139.8 112 55.4
TWI34G0957 Tripterygium wilfordii HOM05D007430 ORTHO05D009322 1.7e-31 139.4 110 59.1
MSTRG.3403 Avicennia marina HOM05D007430 ORTHO05D009322 3.0e-31 138.7 110 62.7
Gohir.A07G179900 Gossypium hirsutum HOM05D007430 ORTHO05D009322 3.0e-31 138.7 114 57.0
Lj2g0026299 Lotus japonicus HOM05D007430 ORTHO05D009322 6.6e-31 137.5 110 56.4
Lalb_Chr02g0158751 Lupinus albus HOM05D007430 ORTHO05D009322 6.6e-31 137.5 110 56.4
AUR62009486 Chenopodium quinoa HOM05D007430 ORTHO05D009322 8.6e-31 137.1 116 58.6
CiPaw.03G083500 Carya illinoinensis HOM05D007430 ORTHO05D009322 1.1e-30 136.7 110 59.1
Manes.02G059000 Manihot esculenta HOM05D007430 ORTHO05D009322 1.9e-30 136.0 110 56.4
arahy.Tifrunner.gnm1.ann1.LXP3AQ Arachis hypogaea HOM05D007430 ORTHO05D009322 4.3e-30 134.8 112 58.0
SGA_v2.0_scaffold148G36438 Striga asiatica HOM05D007430 ORTHO05D009322 4.3e-30 134.8 115 57.4
vmacro05615 Vaccinium macrocarpon HOM05D007430 ORTHO05D009322 4.3e-30 134.8 108 58.3
TAR371G1216 Trochodendron aralioides HOM05D007430 ORTHO05D009322 5.6e-30 134.4 113 56.6
ClCG07G016000 Citrullus lanatus HOM05D007430 ORTHO05D009322 7.3e-30 134.0 108 55.6
arahy.Tifrunner.gnm1.ann1.T6F203 Arachis hypogaea HOM05D007430 ORTHO05D009322 9.6e-30 133.7 112 57.1
Os03g0414400 Oryza sativa ssp. japonica HOM05D007430 ORTHO05D009322 9.6e-30 133.7 110 52.7
PSO478G2979 Papaver somniferum HOM05D007430 ORTHO05D009322 1.2e-29 133.3 109 56.9
QL02p065966 Quercus lobata HOM05D007430 ORTHO05D009322 1.2e-29 133.3 112 55.4
Oeu007080.1 Olea europaea HOM05D007430 ORTHO05D009322 1.6e-29 132.9 111 58.6
Actinidia36267 Actinidia chinensis HOM05D007430 ORTHO05D009322 2.1e-29 132.5 111 56.8
Ca_14394_v3 Cicer arietinum L. HOM05D007430 ORTHO05D009322 2.1e-29 132.5 110 54.5
DCAR_003124 Daucus carota HOM05D007430 ORTHO05D009322 4.7e-29 131.3 113 56.6
PGSC0003DMG400006148 Solanum tuberosum HOM05D007430 ORTHO05D009322 4.7e-29 131.3 109 61.5
Nn8g40106 Nelumbo nucifera HOM05D007430 ORTHO05D009322 1.4e-28 129.8 109 56.9
VMungo0464G1827 Vigna mungo HOM05D007430 ORTHO05D009322 1.4e-28 129.8 110 54.5
Hma1.2p1_1502F.1_g287440 Hydrangea macrophylla HOM05D007430 ORTHO05D009322 1.8e-28 129.4 109 56.9
PSO017G6770 Papaver somniferum HOM05D007430 ORTHO05D009322 1.8e-28 129.4 109 56.0
Glyma.19G034200 Glycine max HOM05D007430 ORTHO05D009322 4.0e-28 128.3 110 51.8
Medtr6g015965 Medicago truncatula HOM05D007430 ORTHO05D009322 5.2e-28 127.9 110 53.6
Atru.chr8.658 Acer truncatum HOM05D007430 ORTHO05D009322 6.9e-28 127.5 106 54.7
Sopen07g024280 Solanum pennellii HOM05D007430 ORTHO05D009322 6.9e-28 127.5 109 60.6
Cc01_g15140 Coffea canephora HOM05D007430 ORTHO05D009322 8.9e-28 127.1 109 53.2
Phvul.004G042100 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 8.9e-28 127.1 110 53.6
TPR.G15952 Trifolium pratense HOM05D007430 ORTHO05D009322 8.9e-28 127.1 110 53.6
Phvul.004G041900 Phaseolus vulgaris HOM05D007430 ORTHO05D009322 1.5e-27 126.3 110 52.7
Solyc07g047840.2 Solanum lycopersicum HOM05D007430 ORTHO05D009322 1.5e-27 126.3 109 60.6
CAN.G854.12 Capsicum annuum HOM05D007430 ORTHO05D009322 2.0e-27 125.9 108 60.2
THA.LOC104820974 Tarenaya hassleriana HOM05D007430 ORTHO05D009322 2.0e-27 125.9 111 54.1
AL6G26650 Arabidopsis lyrata HOM05D007430 ORTHO05D009322 3.4e-27 125.2 111 55.9
AT5G15802 Arabidopsis thaliana HOM05D007430 ORTHO05D009322 3.4e-27 125.2 111 55.9
CANSAT64G0392 Cannabis sativa HOM05D007430 ORTHO05D009322 3.4e-27 125.2 112 54.5
FvH4_6g46430 Fragaria vesca HOM05D007430 ORTHO05D009322 4.4e-27 124.8 100 60.0
Cpa.g.sc14.221 Carica papaya HOM05D007430 ORTHO05D009322 5.8e-27 124.4 114 54.4
CARHR197520 Cardamine hirsuta HOM05D007430 ORTHO05D009322 7.6e-27 124.0 111 55.0
MBI16_g22331_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 1.7e-26 122.9 110 55.5
BcaC04g18935 Brassica carinata HOM05D007430 ORTHO05D009322 2.2e-26 122.5 111 54.1
A10p23220 Brassica napus HOM05D007430 ORTHO05D009322 2.2e-26 122.5 111 54.1
C09p61270 Brassica napus HOM05D007430 ORTHO05D009322 2.2e-26 122.5 111 54.1
BolC9t58969H Brassica oleracea HOM05D007430 ORTHO05D009322 2.2e-26 122.5 111 54.1
BraA10t44390Z Brassica rapa HOM05D007430 ORTHO05D009322 2.2e-26 122.5 111 54.1
TAR629G2042 Trochodendron aralioides HOM05D007430 ORTHO05D009322 3.8e-26 121.7 109 48.6
Migut.O00383 Erythranthe guttata HOM05D007430 ORTHO05D009322 1.4e-25 119.8 109 56.0
Aa31LG11G13770 Aethionema arabicum HOM05D007430 ORTHO05D009322 2.4e-25 119.0 111 50.5
Thhalv10015108m.g Eutrema salsugineum HOM05D007430 ORTHO05D009322 1.6e-24 116.3 112 51.8
Duzib133G1191 Durio zibethinus HOM05D007430 ORTHO05D009322 2.7e-24 115.5 83 62.7
ATR0559G319 Amborella trichopoda HOM05D007430 ORTHO05D009322 3.5e-24 115.2 110 51.8
HPP92_007986 Vanilla planifolia HOM05D007430 ORTHO05D009322 1.7e-23 112.8 103 52.4
SalBow1G0910 Salvia bowleyana HOM05D000293 ORTHO05D000180 2.3e-23 112.5 110 50.9
Carub.0006s1396 Capsella rubella HOM05D007430 ORTHO05D009322 8.7e-23 110.5 111 50.5
Sp6g28310 Schrenkiella parvula HOM05D007430 ORTHO05D009322 2.5e-22 109.0 111 50.5
unitig_32.g10757 Utricularia gibba HOM05D000600 ORTHO05D000432 3.3e-22 108.6 113 50.4
Duzib138G1572 Durio zibethinus HOM05D007430 ORTHO05D009322 5.6e-22 107.8 119 46.2
FAN02G0166 Fragaria x ananassa HOM05D007430 ORTHO05D009322 1.6e-21 106.3 100 55.0
CDE09G0787 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 1.1e-20 103.6 109 50.5
MD09G1073800 Malus domestica HOM05D007430 ORTHO05D009322 1.4e-20 103.2 70 67.1
Nitab4.5_0009877g0030 Nicotiana tabacum HOM05D007430 ORTHO05D009322 2.4e-20 102.4 75 65.3
Nitab4.5_0000441g0090 Nicotiana tabacum HOM05D007430 ORTHO05D009322 6.9e-20 100.9 86 59.3
CDE02G4259 Ceratophyllum demersum HOM05D007430 ORTHO05D009322 3.2e-17 92.0 58 75.9
MBI16_g39931_MAGBIO Magnolia biondii HOM05D007430 ORTHO05D009322 2.7e-16 89.0 110 45.5
Psat1g066840 Pisum sativum HOM05D007430 ORTHO05D009322 3.5e-16 88.6 67 62.7
SEGI_38988 Sequoiadendron giganteum HOM05D007430 ORTHO05D009322 3.5e-16 88.6 108 39.8
Pp3c7_870 Physcomitrium patens HOM05D007430 ORTHO05D009322 5.1e-15 84.7 117 38.5
AagrBONN_evm.TU.Sc2ySwM_228.315 Anthoceros agrestis HOM05D007430 ORTHO05D009322 1.3e-13 80.1 109 39.4
Mapoly0015s0072 Marchantia polymorpha HOM05D007430 ORTHO05D009322 1.6e-13 79.7 107 40.2
COL.COLO4_08471 Corchorus olitorius HOM05D007430 ORTHO05D009322 7.1e-09 64.3 38 81.6
CBR_g37835 Chara braunii HOM05D007430 ORTHO05D009322 7.9e-08 60.8 69 40.6


User provided reference genes

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