Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 5.9e-222 773.9 383 100.0
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 4.6e-174 614.8 383 79.6
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 5.1e-173 611.3 387 79.3
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 2.5e-172 609.0 388 80.7
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 3.6e-171 605.1 388 78.4
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 1.7e-168 596.3 383 77.0
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 1.7e-168 596.3 383 77.0
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 1.9e-167 592.8 384 77.3
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 5.4e-167 591.3 383 75.5
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 3.5e-166 588.6 383 74.9
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 4.6e-166 588.2 384 76.8
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 1.3e-165 586.6 383 76.0
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 3.0e-165 585.5 386 76.7
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 3.9e-165 585.1 387 77.5
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 5.1e-165 584.7 384 76.6
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 1.5e-164 583.2 386 75.4
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 1.9e-164 582.8 388 74.7
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 2.5e-164 582.4 386 76.2
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 1.3e-163 580.1 383 75.5
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 6.2e-163 577.8 383 75.5
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 6.2e-163 577.8 383 75.5
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 1.8e-162 576.2 383 74.7
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 5.3e-162 574.7 390 74.6
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 9.0e-162 573.9 395 73.2
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.0e-161 572.8 387 74.7
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.0e-161 572.8 387 74.7
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 2.6e-161 572.4 395 72.9
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 3.4e-161 572.0 383 74.7
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 9.9e-161 570.5 385 74.8
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 1.7e-160 569.7 382 74.9
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 3.8e-160 568.5 387 74.2
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 6.4e-160 567.8 389 71.5
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 1.1e-159 567.0 386 75.1
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 1.4e-159 566.6 383 73.1
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 1.4e-159 566.6 390 72.8
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 3.2e-159 565.5 393 72.5
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 7.1e-159 564.3 387 72.6
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 1.0e-157 560.5 387 72.4
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 1.8e-157 559.7 402 70.9
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 1.8e-157 559.7 391 72.4
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 2.3e-157 559.3 390 73.1
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 3.3e-156 555.4 390 71.8
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 4.3e-156 555.1 387 73.9
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 9.6e-156 553.9 387 72.6
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 1.3e-155 553.5 395 71.1
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 4.8e-155 551.6 395 70.9
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 4.8e-155 551.6 384 72.1
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 1.1e-154 550.4 385 72.2
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 1.4e-154 550.1 400 70.8
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 1.8e-154 549.7 387 72.1
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 5.3e-154 548.1 353 75.9
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 1.5e-153 546.6 397 69.8
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 5.8e-153 544.7 369 72.4
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 1.3e-152 543.5 385 71.4
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 3.8e-152 542.0 390 71.5
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 4.9e-152 541.6 462 63.0
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 6.5e-152 541.2 385 71.7
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 8.4e-152 540.8 387 71.6
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 1.4e-151 540.0 381 71.1
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 1.4e-151 540.0 367 74.1
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 4.2e-151 538.5 390 70.5
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 5.5e-151 538.1 385 71.2
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 7.1e-151 537.7 389 72.2
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 7.1e-151 537.7 389 72.2
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 7.1e-151 537.7 387 71.1
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 7.1e-151 537.7 390 71.5
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 9.3e-151 537.3 367 73.8
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 4.6e-150 535.0 395 69.4
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 4.6e-150 535.0 299 83.9
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 1.0e-149 533.9 384 70.8
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 1.9e-148 529.6 382 69.1
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 7.4e-148 527.7 389 70.2
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 2.1e-147 526.2 383 68.9
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 2.1e-147 526.2 372 71.0
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 8.2e-147 524.2 388 66.8
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 1.5e-145 520.0 383 68.4
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 7.6e-145 517.7 435 62.5
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.9e-144 515.8 390 68.7
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.5e-143 512.7 390 68.5
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 9.3e-143 510.8 426 64.3
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 7.9e-142 507.7 493 57.6
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 1.3e-141 506.9 383 68.1
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 1.1e-140 503.8 383 67.4
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 3.3e-140 502.3 392 66.1
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 5.7e-140 501.5 390 66.2
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 9.7e-140 500.7 383 65.3
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 2.2e-139 499.6 390 65.6
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 2.8e-139 499.2 330 73.3
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 1.7e-136 490.0 283 80.2
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 3.2e-135 485.7 383 65.3
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 4.6e-134 481.9 385 63.9
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 4.3e-132 475.3 399 64.2
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 6.3e-131 471.5 291 77.7
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 1.1e-130 470.7 295 76.9
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 3.6e-126 455.7 306 69.3
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 1.1e-124 450.7 383 64.0
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 5.3e-122 441.8 370 63.5
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 3.7e-115 419.1 324 66.7
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 1.2e-108 397.5 228 82.9
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 2.8e-107 392.9 329 58.7
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 2.4e-106 389.8 319 59.2
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 1.9e-103 380.2 336 54.5
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 1.8e-101 373.6 213 82.6
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 1.8e-101 373.6 213 82.6
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 4.0e-101 372.5 213 82.2
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 1.8e-98 363.6 326 54.3
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 5.4e-98 362.1 250 70.8
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 1.4e-93 347.4 213 78.4
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 5.7e-92 342.0 251 63.3
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 4.4e-84 315.8 291 58.1
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 1.7e-80 303.9 290 48.6
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 8.9e-77 291.6 230 64.8
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.7e-75 287.3 177 76.8
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 2.2e-75 287.0 287 48.1
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 1.6e-73 280.8 304 45.4
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 2.4e-66 256.9 278 45.0
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 3.5e-65 253.1 157 77.7
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 5.4e-58 229.2 134 82.8
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 5.5e-42 176.0 161 50.9
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 2.7e-41 173.7 169 56.8
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 8.1e-38 162.2 108 66.7
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 7.1e-34 149.1 108 64.8
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 2.4e-29 134.0 97 62.9
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 6.9e-29 132.5 170 46.5
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 2.9e-27 127.1 87 66.7
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 4.8e-22 109.8 66 75.8
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 3.3e-15 87.0 47 80.9
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 3.3e-15 87.0 47 80.9
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 1.0e-11 75.5 109 43.1
TAR628G1549 Trochodendron aralioides HOM05D006111 ORTHO05D414729 1.8e-08 64.7 41 73.2


User provided reference genes

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