Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 5.3e-96 354.4 180 100.0
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 2.5e-53 212.6 154 72.7
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 7.9e-52 207.6 157 75.2
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 1.8e-51 206.5 132 79.5
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 2.6e-50 202.6 155 71.0
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 1.8e-48 196.4 155 70.3
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 5.9e-47 191.4 156 71.2
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 5.9e-47 191.4 132 75.8
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 2.2e-46 189.5 160 68.1
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 3.8e-46 188.7 156 69.2
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 6.5e-46 188.0 156 69.9
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 1.1e-45 187.2 130 76.2
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 4.2e-45 185.3 136 72.1
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 4.2e-45 185.3 156 68.6
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 4.2e-45 185.3 155 68.4
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 2.1e-44 183.0 136 72.1
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 1.8e-43 179.9 131 73.3
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 3.0e-43 179.1 135 69.6
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 4.0e-43 178.7 156 65.4
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 4.0e-43 178.7 112 83.0
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 1.2e-42 177.2 156 66.7
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 1.2e-42 177.2 117 77.8
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 3.3e-42 175.6 134 70.9
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 4.4e-42 175.3 131 72.5
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 5.7e-42 174.9 128 74.2
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 7.5e-42 174.5 128 74.2
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 7.5e-42 174.5 128 73.4
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 9.7e-42 174.1 154 66.9
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 1.3e-41 173.7 119 79.0
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 1.7e-41 173.3 160 64.4
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 2.2e-41 172.9 154 65.6
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 2.8e-41 172.6 128 73.4
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 3.7e-41 172.2 156 63.5
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 4.8e-41 171.8 156 66.0
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 1.1e-40 170.6 132 68.9
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.8e-40 169.9 157 66.9
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 1.8e-40 169.9 157 66.9
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 2.4e-40 169.5 131 70.2
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 3.1e-40 169.1 163 63.2
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 3.1e-40 169.1 133 72.2
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 4.1e-40 168.7 156 62.8
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 5.3e-40 168.3 133 70.7
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 5.3e-40 168.3 129 69.8
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 7.0e-40 167.9 136 67.6
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 7.0e-40 167.9 133 69.9
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 7.0e-40 167.9 132 72.7
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 1.2e-39 167.2 132 68.2
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 2.0e-39 166.4 99 85.9
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 2.7e-39 166.0 164 62.8
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 2.7e-39 166.0 163 62.0
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 3.5e-39 165.6 157 66.9
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 4.5e-39 165.2 137 67.2
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 4.5e-39 165.2 128 74.2
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 5.9e-39 164.9 110 78.2
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 1.0e-38 164.1 139 66.2
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.7e-38 163.3 157 62.4
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 1.7e-38 163.3 127 70.1
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 1.7e-38 163.3 135 66.7
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 1.7e-38 163.3 102 82.4
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 2.2e-38 162.9 157 62.4
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 2.2e-38 162.9 157 62.4
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 2.9e-38 162.5 132 69.7
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 5.0e-38 161.8 156 64.1
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 6.5e-38 161.4 139 65.5
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 1.1e-37 160.6 131 66.4
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 1.1e-37 160.6 139 67.6
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.9e-37 159.8 163 58.3
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 1.9e-37 159.8 132 67.4
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 2.5e-37 159.5 124 71.0
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 2.5e-37 159.5 138 63.0
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 3.2e-37 159.1 158 59.5
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 3.2e-37 159.1 102 80.4
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 4.2e-37 158.7 135 63.0
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 4.2e-37 158.7 163 57.7
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 5.5e-37 158.3 135 63.7
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 5.5e-37 158.3 135 63.0
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 5.5e-37 158.3 110 77.3
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 9.4e-37 157.5 124 70.2
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 9.4e-37 157.5 155 61.9
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 1.2e-36 157.1 108 75.9
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 1.2e-36 157.1 135 63.7
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 1.6e-36 156.8 128 70.3
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 2.1e-36 156.4 156 62.2
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 2.1e-36 156.4 120 70.0
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 2.1e-36 156.4 140 63.6
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 2.1e-36 156.4 126 68.3
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 2.1e-36 156.4 103 76.7
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 2.7e-36 156.0 158 61.4
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 3.6e-36 155.6 102 80.4
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 3.6e-36 155.6 133 66.2
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 6.1e-36 154.8 137 65.7
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 6.1e-36 154.8 158 62.0
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 6.1e-36 154.8 122 69.7
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 1.4e-35 153.7 115 73.0
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 1.4e-35 153.7 138 63.8
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 1.4e-35 153.7 142 62.0
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 1.8e-35 153.3 157 60.5
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 2.3e-35 152.9 138 62.3
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 3.0e-35 152.5 141 63.1
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 3.0e-35 152.5 139 66.9
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 4.0e-35 152.1 127 67.7
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 6.8e-35 151.4 165 56.4
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 6.8e-35 151.4 139 64.0
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 6.8e-35 151.4 138 63.0
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 6.8e-35 151.4 166 56.0
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 8.8e-35 151.0 159 61.6
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 8.8e-35 151.0 167 58.1
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.2e-34 150.6 125 68.8
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 1.2e-34 150.6 135 67.4
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 1.5e-34 150.2 156 59.6
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 2.0e-34 149.8 102 77.5
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 2.6e-34 149.4 109 72.5
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 2.6e-34 149.4 160 61.2
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 3.4e-34 149.1 135 63.7
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 4.4e-34 148.7 155 59.4
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 4.4e-34 148.7 165 57.6
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 5.7e-34 148.3 102 75.5
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 5.7e-34 148.3 135 63.7
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 7.5e-34 147.9 108 73.1
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 9.8e-34 147.5 108 72.2
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 9.8e-34 147.5 108 72.2
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 1.3e-33 147.1 108 72.2
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 1.3e-33 147.1 108 72.2
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 2.8e-33 146.0 96 78.1
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 4.8e-33 145.2 128 68.0
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 1.1e-32 144.1 164 56.7
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 1.4e-32 143.7 96 78.1
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 1.8e-32 143.3 132 60.6
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 3.1e-32 142.5 131 64.9
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 4.1e-32 142.1 113 66.4
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.2e-31 140.6 132 62.9
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 1.2e-31 140.6 106 71.7
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 1.7e-30 136.7 131 60.3
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 5.0e-30 135.2 100 71.0
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 4.2e-29 132.1 71 97.2
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 4.2e-29 132.1 71 97.2
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 7.2e-29 131.3 132 59.8
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 7.2e-29 131.3 93 74.2
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 9.5e-29 131.0 104 66.3
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.2e-28 130.6 83 81.9
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 1.6e-28 130.2 157 54.8
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 2.1e-28 129.8 71 93.0
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 4.7e-28 128.6 109 62.4
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.0e-27 127.5 156 53.8
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 2.3e-27 126.3 100 67.0
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 3.0e-27 125.9 73 89.0
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 5.2e-27 125.2 131 57.3
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 1.2e-26 124.0 69 88.4
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 2.0e-26 123.2 132 60.6
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 2.0e-26 123.2 75 84.0
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 2.0e-26 123.2 107 61.7
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 6.3e-25 118.2 70 82.9
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.4e-24 117.1 109 57.8
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 7.8e-23 111.3 114 59.6
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 8.0e-20 101.3 78 66.7
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 1.0e-19 100.9 76 65.8
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 1.0e-19 100.9 90 65.6
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 1.4e-16 90.5 79 62.0
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 9.2e-16 87.8 68 70.6
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 1.6e-15 87.0 66 66.7
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 1.0e-14 84.3 98 51.0
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 1.7e-14 83.6 68 66.2
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 5.0e-14 82.0 68 67.6
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 3.3e-13 79.3 68 66.2
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 3.3e-13 79.3 68 66.2
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 3.3e-13 79.3 101 44.6
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 3.6e-12 75.9 44 88.6


User provided reference genes

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