Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc09g0009810 Simmondsia chinensis HOM05D003722 ORTHO05D004589 1.1e-83 313.2 151 100.0
Sc09g0010110 Simmondsia chinensis HOM05D003722 ORTHO05D004589 1.1e-46 190.3 141 65.2
MBI13_g31962_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 9.7e-19 97.4 138 42.0
Sc23g0004200 Simmondsia chinensis HOM05D003722 ORTHO05D004589 2.5e-14 82.8 162 32.1
TPR.G38933 Trifolium pratense HOM05D003722 ORTHO05D004589 5.2e-12 75.1 169 29.0
arahy.Tifrunner.gnm1.ann1.JX1TK4 Arachis hypogaea HOM05D003722 ORTHO05D004589 1.5e-11 73.6 165 29.1
Medtr1g015450 Medicago truncatula HOM05D003722 ORTHO05D004589 4.4e-11 72.0 168 28.6
Psat6g022880 Pisum sativum HOM05D003722 ORTHO05D004589 4.4e-11 72.0 164 28.7
Zm00001eb223490 Zea mays HOM05D003722 ORTHO05D004589 7.5e-11 71.2 151 30.5
EL10Ac2g03782 Beta vulgaris HOM05D003722 ORTHO05D004589 9.7e-11 70.9 166 28.3
AT4G33210 Arabidopsis thaliana HOM05D003722 ORTHO05D004589 1.3e-10 70.5 71 52.1
Oeu028128.1 Olea europaea HOM05D003722 ORTHO05D004589 1.3e-10 70.5 165 30.3
Hund19422 Selenicereus undatus HOM05D003722 ORTHO05D004589 1.3e-10 70.5 68 52.9
Glyma.06G055800 Glycine max HOM05D003722 ORTHO05D004589 2.2e-10 69.7 164 28.7
SalBow4G2891 Salvia bowleyana HOM05D003722 ORTHO05D004589 2.2e-10 69.7 164 29.3
Zm00001eb048660 Zea mays HOM05D003722 ORTHO05D004589 2.2e-10 69.7 76 50.0
VMungo1309G1038 Vigna mungo HOM05D003722 ORTHO05D004589 3.7e-10 68.9 164 27.4
unitig_748.g8237 Utricularia gibba HOM05D003722 ORTHO05D004589 4.8e-10 68.6 67 52.2
Cc08_g01170 Coffea canephora HOM05D003722 ORTHO05D004589 6.3e-10 68.2 165 28.5
Phvul.009G081900 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 6.3e-10 68.2 164 27.4
BraA03t15228Z Brassica rapa HOM05D003722 ORTHO05D004589 8.2e-10 67.8 71 50.7
Os10g0396400 Oryza sativa ssp. japonica HOM05D003722 ORTHO05D004589 8.2e-10 67.8 76 48.7
BraA08t33724Z Brassica rapa HOM05D003722 ORTHO05D004589 1.1e-09 67.4 133 31.6
MD08G1071300 Malus domestica HOM05D003722 ORTHO05D004589 1.1e-09 67.4 67 49.3
Manes.16G085600 Manihot esculenta HOM05D003722 ORTHO05D004589 1.1e-09 67.4 165 27.9
FvH4_2g30970 Fragaria vesca HOM05D003722 ORTHO05D004589 1.8e-09 66.6 165 28.5
FAN24G1820 Fragaria x ananassa HOM05D003722 ORTHO05D004589 1.8e-09 66.6 165 28.5
A08p17740 Brassica napus HOM05D003722 ORTHO05D004589 4.1e-09 65.5 133 30.8
AUR62009080 Chenopodium quinoa HOM05D003722 ORTHO05D004589 5.3e-09 65.1 68 50.0
AUR62020586 Chenopodium quinoa HOM05D003722 ORTHO05D004589 5.3e-09 65.1 68 50.0
FAN27G2597 Fragaria x ananassa HOM05D003722 ORTHO05D004589 5.3e-09 65.1 165 28.5
Glyma.04G055700 Glycine max HOM05D003722 ORTHO05D004589 7.0e-09 64.7 66 50.0
CSS0013734 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 1.2e-08 63.9 165 27.3
SGA_v2.0_scaffold169G38713 Striga asiatica HOM05D003722 ORTHO05D004589 1.2e-08 63.9 154 29.2
CSS0048906 Camellia sinensis var. sinensis HOM05D003722 ORTHO05D004589 1.6e-08 63.5 165 27.3
HanXRQChr05g0135941 Helianthus annuus HOM05D003722 ORTHO05D004589 1.6e-08 63.5 182 26.4
Lj5g0007526 Lotus japonicus HOM05D003722 ORTHO05D004589 1.6e-08 63.5 67 49.3
C03p86790 Brassica napus HOM05D003722 ORTHO05D004589 2.0e-08 63.2 151 27.8
SMO238G0031 Selaginella moellendorffii HOM05D003722 ORTHO05D004589 2.0e-08 63.2 71 49.3
Potri.018G048700 Populus trichocarpa HOM05D003722 ORTHO05D004589 2.7e-08 62.8 61 52.5
CiPaw.15G091900 Carya illinoinensis HOM05D003722 ORTHO05D004589 3.5e-08 62.4 63 50.8
HanXRQChr03g0065591 Helianthus annuus HOM05D003722 ORTHO05D004589 4.5e-08 62.0 161 28.6
ECA236G0039 Erigeron canadensis HOM05D003722 ORTHO05D004589 5.9e-08 61.6 165 26.7
FAN20G0071 Fragaria x ananassa HOM05D003722 ORTHO05D004589 5.9e-08 61.6 67 49.3
BolC3t20974H Brassica oleracea HOM05D003722 ORTHO05D004589 7.7e-08 61.2 152 29.6
Pp3c4_12360 Physcomitrium patens HOM05D003722 ORTHO05D004589 1.3e-07 60.5 169 28.4
RcHm_v2.0_Chr6g0311801 Rosa chinensis HOM05D003722 ORTHO05D004589 1.3e-07 60.5 73 45.2
GSVIVG01035469001 Vitis vinifera HOM05D003722 ORTHO05D004589 1.3e-07 60.5 165 26.1
BcaB03g12811 Brassica carinata HOM05D003722 ORTHO05D004589 1.7e-07 60.1 151 27.8
DCAR_004379 Daucus carota HOM05D003722 ORTHO05D004589 1.7e-07 60.1 64 50.0
Prupe.1G404200 Prunus persica HOM05D003722 ORTHO05D004589 1.7e-07 60.1 57 50.9
MBI19_g11832_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 2.2e-07 59.7 65 50.8
SGA_v2.0_scaffold163G37999 Striga asiatica HOM05D003722 ORTHO05D004589 2.2e-07 59.7 154 28.6
Glyma.17G225800 Glycine max HOM05D003722 ORTHO05D004589 3.8e-07 58.9 154 27.3
HanXRQChr09g0261801 Helianthus annuus HOM05D003722 ORTHO05D004589 3.8e-07 58.9 78 43.6
SEGI_30451 Sequoiadendron giganteum HOM05D003722 ORTHO05D004589 3.8e-07 58.9 67 44.8
Lalb_Chr22g0356231 Lupinus albus HOM05D003722 ORTHO05D004589 5.0e-07 58.5 155 26.5
MD15G1049900 Malus domestica HOM05D003722 ORTHO05D004589 5.0e-07 58.5 57 49.1
Phvul.001G038700 Phaseolus vulgaris HOM05D003722 ORTHO05D004589 5.0e-07 58.5 154 27.3
Pp3c12_17410 Physcomitrium patens HOM05D003722 ORTHO05D004589 5.0e-07 58.5 169 26.6
TWI34G0168 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 5.0e-07 58.5 56 53.6
Actinidia27552 Actinidia chinensis HOM05D003722 ORTHO05D004589 6.5e-07 58.2 56 53.6
AagrBONN_evm.TU.Sc2ySwM_117.2463 Anthoceros agrestis HOM05D003722 ORTHO05D004589 6.5e-07 58.2 71 43.7
arahy.Tifrunner.gnm1.ann1.V9GZ7C Arachis hypogaea HOM05D003722 ORTHO05D004589 6.5e-07 58.2 153 27.5
QL02p017002 Quercus lobata HOM05D003722 ORTHO05D004589 6.5e-07 58.2 56 51.8
BcaC01g01002 Brassica carinata HOM05D003722 ORTHO05D004589 8.5e-07 57.8 151 27.2
BolC3t20973H Brassica oleracea HOM05D003722 ORTHO05D004589 8.5e-07 57.8 151 27.2
Lalb_Chr23g0267971 Lupinus albus HOM05D003722 ORTHO05D004589 8.5e-07 57.8 84 42.9
Solyc08g061820.3 Solanum lycopersicum HOM05D003722 ORTHO05D004589 8.5e-07 57.8 166 27.1
Sopen08g017250 Solanum pennellii HOM05D003722 ORTHO05D004589 8.5e-07 57.8 166 27.1
PGSC0003DMG400018806 Solanum tuberosum HOM05D003722 ORTHO05D004589 8.5e-07 57.8 166 27.1
VMungo0647G1341 Vigna mungo HOM05D003722 ORTHO05D004589 8.5e-07 57.8 151 26.5
Aqoxy7G04082 Aquilegia oxysepala HOM05D003722 ORTHO05D004589 1.1e-06 57.4 169 25.4
MSTRG.25985 Avicennia marina HOM05D003722 ORTHO05D004589 1.1e-06 57.4 152 27.0
Glyma.14G098900 Glycine max HOM05D003722 ORTHO05D004589 1.1e-06 57.4 153 26.8
Sp7g30950 Schrenkiella parvula HOM05D003722 ORTHO05D004589 1.1e-06 57.4 60 53.3
ATR0598G202 Amborella trichopoda HOM05D003722 ORTHO05D004589 1.5e-06 57.0 61 54.1
Ca_13110_v3 Cicer arietinum L. HOM05D003722 ORTHO05D004589 1.5e-06 57.0 155 26.5
MBI13_g13882_MAGBIO Magnolia biondii HOM05D003722 ORTHO05D004589 1.5e-06 57.0 58 51.7
arahy.Tifrunner.gnm1.ann1.V7LPDI Arachis hypogaea HOM05D003722 ORTHO05D004589 1.9e-06 56.6 151 27.2
HPP92_006154 Vanilla planifolia HOM05D003722 ORTHO05D004589 1.9e-06 56.6 165 27.3
BcaNung02160 Brassica carinata HOM05D003722 ORTHO05D004589 2.5e-06 56.2 60 53.3
BolC7t46400H Brassica oleracea HOM05D003722 ORTHO05D004589 2.5e-06 56.2 60 53.3
Oeu036060.1 Olea europaea HOM05D003722 ORTHO05D004589 2.5e-06 56.2 156 27.6
Potri.006G220900 Populus trichocarpa HOM05D003722 ORTHO05D004589 2.5e-06 56.2 56 50.0
BcaC09g52132 Brassica carinata HOM05D003722 ORTHO05D004589 3.2e-06 55.8 59 52.5
A01p04970 Brassica napus HOM05D003722 ORTHO05D004589 3.2e-06 55.8 59 52.5
C01p05420 Brassica napus HOM05D003722 ORTHO05D004589 3.2e-06 55.8 59 52.5
BolC1t00522H Brassica oleracea HOM05D003722 ORTHO05D004589 3.2e-06 55.8 59 52.5
BraA01t00479Z Brassica rapa HOM05D003722 ORTHO05D004589 3.2e-06 55.8 59 52.5
CAN.G881.1 Capsicum annuum HOM05D003722 ORTHO05D004589 3.2e-06 55.8 166 26.5
Dinv41842 Davidia involucrata HOM05D003722 ORTHO05D004589 3.2e-06 55.8 56 50.0
PSO135G0299 Papaver somniferum HOM05D003722 ORTHO05D004589 3.2e-06 55.8 136 30.1
PSO724G0454 Papaver somniferum HOM05D003722 ORTHO05D004589 3.2e-06 55.8 136 30.1
Gohir.A07G223200 Gossypium hirsutum HOM05D004871 ORTHO05D005755 4.2e-06 55.5 159 26.4
Sabra18G0046400 Salix brachista HOM05D003722 ORTHO05D004589 4.2e-06 55.5 54 50.0
TWI32G0253 Tripterygium wilfordii HOM05D003722 ORTHO05D004589 5.5e-06 55.1 53 52.8
Hma1.2p1_0836F.1_g225970 Hydrangea macrophylla HOM05D003722 ORTHO05D004589 7.2e-06 54.7 55 52.7
Rhsim03G0063100 Rhododendron simsii HOM05D003722 ORTHO05D004589 7.2e-06 54.7 56 48.2
Lsat_1_v5_gn_8_70661 Lactuca sativa HOM05D003722 ORTHO05D004589 9.4e-06 54.3 56 50.0
Mapoly0202s0013 Marchantia polymorpha HOM05D003722 ORTHO05D004589 9.4e-06 54.3 71 43.7


User provided reference genes

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