Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 1.0e-73 280.0 144 100.0
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 4.6e-42 174.9 126 71.4
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 8.6e-41 170.6 110 79.1
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 7.3e-40 167.5 108 75.9
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 1.6e-39 166.4 142 59.2
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 3.6e-39 165.2 135 63.0
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 4.7e-39 164.9 108 72.2
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 8.1e-39 164.1 117 70.9
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 2.3e-38 162.5 140 61.4
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 3.1e-38 162.2 108 72.2
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 1.2e-37 160.2 99 76.8
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 2.0e-37 159.5 108 74.1
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 2.6e-37 159.1 158 58.2
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 2.6e-37 159.1 136 64.7
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 3.4e-37 158.7 104 76.0
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 4.4e-37 158.3 108 69.4
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 4.4e-37 158.3 118 67.8
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 5.8e-37 157.9 130 63.1
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 5.8e-37 157.9 143 55.9
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 5.8e-37 157.9 140 60.0
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 7.5e-37 157.5 109 72.5
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 7.5e-37 157.5 112 74.1
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 9.9e-37 157.1 112 70.5
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 9.9e-37 157.1 108 69.4
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 1.3e-36 156.8 133 64.7
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 1.7e-36 156.4 118 67.8
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 2.2e-36 156.0 142 59.2
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 2.9e-36 155.6 100 74.0
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 2.9e-36 155.6 108 68.5
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 2.9e-36 155.6 130 59.2
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 4.9e-36 154.8 142 59.2
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 4.9e-36 154.8 108 69.4
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 6.4e-36 154.5 138 56.5
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 6.4e-36 154.5 104 70.2
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 8.3e-36 154.1 101 72.3
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.1e-35 153.7 108 67.6
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.1e-35 153.7 108 67.6
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 1.1e-35 153.7 142 59.9
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 1.1e-35 153.7 136 59.6
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 1.1e-35 153.7 110 67.3
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 1.1e-35 153.7 101 73.3
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 1.9e-35 152.9 106 70.8
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 2.4e-35 152.5 114 66.7
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 3.2e-35 152.1 99 71.7
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 5.4e-35 151.4 107 71.0
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 5.4e-35 151.4 111 68.5
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 1.2e-34 150.2 125 62.4
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 1.2e-34 150.2 99 71.7
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 2.7e-34 149.1 126 62.7
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 3.5e-34 148.7 142 58.5
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 4.6e-34 148.3 101 69.3
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 6.0e-34 147.9 107 66.4
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 6.0e-34 147.9 157 52.2
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 6.0e-34 147.9 99 70.7
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 1.7e-33 146.4 107 70.1
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 1.7e-33 146.4 140 55.0
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 2.3e-33 146.0 144 54.9
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 2.3e-33 146.0 107 66.4
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 2.3e-33 146.0 107 66.4
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 3.0e-33 145.6 145 53.8
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 3.9e-33 145.2 142 57.7
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 5.1e-33 144.8 105 67.6
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 5.1e-33 144.8 180 48.9
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 8.6e-33 144.1 144 54.2
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 2.5e-32 142.5 133 51.9
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 2.5e-32 142.5 102 68.6
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 3.3e-32 142.1 109 67.9
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 3.3e-32 142.1 139 59.7
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 3.3e-32 142.1 98 71.4
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 4.3e-32 141.7 122 62.3
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 5.6e-32 141.4 107 63.6
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 5.6e-32 141.4 101 67.3
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 9.5e-32 140.6 104 64.4
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 9.5e-32 140.6 142 57.7
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 9.5e-32 140.6 97 71.1
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 1.2e-31 140.2 148 51.4
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 1.2e-31 140.2 93 72.0
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 2.1e-31 139.4 108 64.8
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 3.6e-31 138.7 102 67.6
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 4.7e-31 138.3 109 67.0
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 4.7e-31 138.3 149 49.7
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 6.2e-31 137.9 104 63.5
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 6.2e-31 137.9 142 52.8
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 8.1e-31 137.5 101 64.4
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 1.4e-30 136.7 107 62.6
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 1.4e-30 136.7 188 42.6
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 1.8e-30 136.3 133 54.1
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 1.8e-30 136.3 104 61.5
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 1.8e-30 136.3 101 62.4
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 2.4e-30 136.0 101 62.4
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 2.4e-30 136.0 104 61.5
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 2.4e-30 136.0 104 61.5
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 2.4e-30 136.0 145 50.3
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 2.4e-30 136.0 164 48.2
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 3.1e-30 135.6 101 63.4
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 3.1e-30 135.6 119 57.1
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 4.0e-30 135.2 101 63.4
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 1.5e-29 133.3 146 52.7
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 1.5e-29 133.3 118 55.9
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 2.0e-29 132.9 124 54.0
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 4.4e-29 131.7 131 52.7
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 9.9e-29 130.6 108 60.2
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 1.1e-27 127.1 120 53.3
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 3.3e-24 115.5 133 52.6
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 7.3e-24 114.4 105 56.2
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 8.1e-23 110.9 80 66.2
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 5.2e-22 108.2 83 63.9
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 4.4e-21 105.1 228 32.5
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 4.2e-19 98.6 111 45.0
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 3.5e-18 95.5 84 58.3
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 6.0e-18 94.7 61 70.5
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 1.0e-17 94.0 65 67.7
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 1.1e-16 90.5 104 45.2
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 1.1e-16 90.5 55 78.2
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 3.3e-16 89.0 114 40.4
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 6.2e-15 84.7 94 42.6
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 3.4e-13 79.0 111 35.1
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 5.8e-13 78.2 93 50.5
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 1.6e-10 70.1 97 39.2
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 2.3e-09 66.2 42 69.0
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 3.3e-08 62.4 96 32.3
MBI13_g38674_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 5.3e-06 55.1 95 40.0


User provided reference genes

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