Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc09g0009390 Simmondsia chinensis HOM05D000448 ORTHO05D000291 3.2e-44 181.4 93 100.0
Sc09g0009380 Simmondsia chinensis HOM05D000448 ORTHO05D000291 8.6e-18 93.6 69 73.9
Sc23g0005330 Simmondsia chinensis HOM05D000448 ORTHO05D000291 4.2e-12 74.7 70 62.9
EL10Ac2g03996 Beta vulgaris HOM05D000448 ORTHO05D000291 1.6e-11 72.8 70 61.4
Sc23g0005360 Simmondsia chinensis HOM05D000448 ORTHO05D000291 2.7e-11 72.0 70 60.0
Sc23g0005320 Simmondsia chinensis HOM05D000448 ORTHO05D000291 4.6e-11 71.2 70 61.4
AUR62041976 Chenopodium quinoa HOM05D000448 ORTHO05D000291 8.7e-10 67.0 70 57.1
EL10Ac2g03995 Beta vulgaris HOM05D000448 ORTHO05D000291 1.1e-09 66.6 70 60.0
Ah.16g105930 Amaranthus hybridus HOM05D000448 ORTHO05D000291 7.3e-09 63.9 63 58.7
AUR62009251 Chenopodium quinoa HOM05D000448 ORTHO05D000291 9.6e-09 63.5 71 56.3
HanXRQChr12g0358831 Helianthus annuus HOM05D000448 ORTHO05D000291 9.6e-09 63.5 71 52.1
AUR62043589 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.3e-08 63.2 76 52.6
AUR62044748 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.3e-08 63.2 76 52.6
AUR62043848 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.6e-08 62.8 71 56.3
AUR62043869 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.6e-08 62.8 71 56.3
ECA234G4737 Erigeron canadensis HOM05D000448 ORTHO05D000291 1.6e-08 62.8 76 51.3
AUR62009253 Chenopodium quinoa HOM05D000448 ORTHO05D000291 2.8e-08 62.0 70 57.1
AUR62009256 Chenopodium quinoa HOM05D000448 ORTHO05D000291 2.8e-08 62.0 80 50.0
AUR62009249 Chenopodium quinoa HOM05D000448 ORTHO05D000291 3.6e-08 61.6 76 52.6
Peaxi162Scf00565g00719 Petunia axillaris HOM05D000448 ORTHO05D000291 3.6e-08 61.6 57 59.6
Peaxi162Scf01938g00005 Petunia axillaris HOM05D000448 ORTHO05D000291 3.6e-08 61.6 57 59.6
AUR62043845 Chenopodium quinoa HOM05D000448 ORTHO05D000291 4.8e-08 61.2 70 54.3
AUR62043870 Chenopodium quinoa HOM05D000448 ORTHO05D000291 4.8e-08 61.2 71 53.5
AUR62043766 Chenopodium quinoa HOM05D000448 ORTHO05D000291 8.1e-08 60.5 68 55.9
EL10Ac2g04012 Beta vulgaris HOM05D000448 ORTHO05D000291 1.1e-07 60.1 76 52.6
AUR62043847 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.1e-07 60.1 71 54.9
ECA234G0709 Erigeron canadensis HOM05D000448 ORTHO05D000291 1.4e-07 59.7 76 50.0
AUR62009255 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.8e-07 59.3 71 53.5
EL10Ac2g04009 Beta vulgaris HOM05D000448 ORTHO05D000291 2.4e-07 58.9 76 51.3
Ah.16g105920 Amaranthus hybridus HOM05D000448 ORTHO05D000291 3.1e-07 58.5 77 49.4
AUR62043591 Chenopodium quinoa HOM05D000448 ORTHO05D000291 4.0e-07 58.2 81 49.4
AUR62001038 Chenopodium quinoa HOM05D000448 ORTHO05D000291 5.3e-07 57.8 70 51.4
Hma1.2p1_2573F.1_g324630 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 5.3e-07 57.8 72 50.0
ClCG00G004190 Citrullus lanatus HOM05D000448 ORTHO05D000291 3.4e-06 55.1 74 40.5
ClCG08G009940 Citrullus lanatus HOM05D000448 ORTHO05D000291 3.4e-06 55.1 74 40.5
Lsat_1_v5_gn_5_78720 Lactuca sativa HOM05D000448 ORTHO05D000291 3.4e-06 55.1 75 48.0
Hma1.2p1_2021F.1_g311300 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 5.8e-06 54.3 87 41.4
Sc09g0010010 Simmondsia chinensis HOM05D000448 ORTHO05D000291 5.8e-06 54.3 74 48.6
Lsat_1_v5_gn_5_78760 Lactuca sativa HOM05D000448 ORTHO05D000291 7.6e-06 53.9 75 50.7
SalBow1G4290 Salvia bowleyana HOM05D000448 ORTHO05D000291 7.6e-06 53.9 78 42.3
Duzib150G0465 Durio zibethinus HOM05D000448 ORTHO05D000291 9.9e-06 53.5 74 45.9
HanXRQChr12g0358821 Helianthus annuus HOM05D000448 ORTHO05D000291 9.9e-06 53.5 72 50.0


User provided reference genes

Program Settings