Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc09g0007600 Simmondsia chinensis HOM05D007695 ORTHO05D009675 1.9e-60 236.1 160 100.0
TWI32G1143 Tripterygium wilfordii HOM05D007695 ORTHO05D009675 1.6e-27 126.7 76 75.0
CSS0012508 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D000005 4.6e-27 125.2 83 68.7
Actinidia37127 Actinidia chinensis HOM05D007695 ORTHO05D009675 6.0e-27 124.8 83 67.5
Potri.007G068500 Populus trichocarpa HOM05D007695 ORTHO05D009675 2.3e-26 122.9 83 69.9
EL10Ac2g03268 Beta vulgaris HOM05D007695 ORTHO05D009675 1.5e-25 120.2 80 70.0
COL.COLO4_32235 Corchorus olitorius HOM05D007695 ORTHO05D009675 1.9e-25 119.8 80 66.2
Gohir.A13G123700 Gossypium hirsutum HOM05D007695 ORTHO05D009675 1.9e-25 119.8 80 66.2
CiPaw.11G064100 Carya illinoinensis HOM05D007695 ORTHO05D009675 3.3e-25 119.0 162 47.5
Rhsim04G0004200 Rhododendron simsii HOM05D007695 ORTHO05D009675 3.3e-25 119.0 83 62.7
CANSAT80G0100 Cannabis sativa HOM05D007695 ORTHO05D009675 4.3e-25 118.6 74 68.9
Gohir.D13G127533 Gossypium hirsutum HOM05D007695 ORTHO05D009675 4.3e-25 118.6 78 66.7
Gorai.013G142800 Gossypium raimondii HOM05D007695 ORTHO05D009675 4.3e-25 118.6 78 66.7
GSVIVG01036789001 Vitis vinifera HOM05D007695 ORTHO05D009675 7.4e-25 117.9 159 42.8
Duzib187G1742 Durio zibethinus HOM05D000001 ORTHO05D000003 9.6e-25 117.5 84 63.1
Cfa010552 Carpinus fangiana HOM05D007695 ORTHO05D009675 1.3e-24 117.1 86 61.6
Sabra05G0078900 Salix brachista HOM05D007695 ORTHO05D009675 1.3e-24 117.1 78 67.9
SGA_v2.0_scaffold7G03606 Striga asiatica HOM05D007695 ORTHO05D009675 1.3e-24 117.1 83 63.9
Duzib213G0064 Durio zibethinus HOM05D007695 ORTHO05D009675 2.1e-24 116.3 86 62.8
Hma1.2p1_0119F.1_g056770 Hydrangea macrophylla HOM05D007695 ORTHO05D009675 2.1e-24 116.3 80 62.5
MD05G1224500 Malus domestica HOM05D007695 ORTHO05D009675 2.1e-24 116.3 78 67.9
Potri.005G095700 Populus trichocarpa HOM05D007695 ORTHO05D009675 2.1e-24 116.3 77 68.8
Dinv19595 Davidia involucrata HOM05D007695 ORTHO05D009675 2.8e-24 115.9 76 68.4
MD10G1206200 Malus domestica HOM05D007695 ORTHO05D009675 2.8e-24 115.9 78 67.9
Migut.M01534 Erythranthe guttata HOM05D007695 ORTHO05D009675 6.2e-24 114.8 124 49.2
CAN.G610.6 Capsicum annuum HOM05D007695 ORTHO05D009675 8.1e-24 114.4 78 65.4
AUR62037645 Chenopodium quinoa HOM05D007695 ORTHO05D009675 8.1e-24 114.4 78 64.1
Ciclev10006169m.g Citrus clementina HOM05D007695 ORTHO05D009675 8.1e-24 114.4 74 67.6
Oeu034976.1 Olea europaea HOM05D000672 ORTHO05D009675 8.1e-24 114.4 82 61.0
Sopen05g004520 Solanum pennellii HOM05D007695 ORTHO05D009675 8.1e-24 114.4 79 65.8
PGSC0003DMG400030526 Solanum tuberosum HOM05D007695 ORTHO05D009675 1.1e-23 114.0 79 65.8
Thecc.07G171400 Theobroma cacao HOM05D007695 ORTHO05D009675 1.1e-23 114.0 75 68.0
ClCG09G022690 Citrullus lanatus HOM05D007695 ORTHO05D009675 1.4e-23 113.6 78 64.1
CsaV3_7G022890 Cucumis sativus L. HOM05D007695 ORTHO05D009675 1.8e-23 113.2 86 62.8
Lsat_1_v5_gn_7_110340 Lactuca sativa HOM05D007695 ORTHO05D009675 1.8e-23 113.2 81 63.0
Solyc05g008750.3 Solanum lycopersicum HOM05D007695 ORTHO05D009675 1.8e-23 113.2 79 64.6
MSTRG.7074 Avicennia marina HOM05D007695 ORTHO05D009675 2.4e-23 112.8 83 62.7
Os02g0170200 Oryza sativa ssp. japonica HOM05D007695 ORTHO05D009675 3.1e-23 112.5 74 68.9
QL04p080880 Quercus lobata HOM05D007695 ORTHO05D009675 3.1e-23 112.5 78 62.8
vmacro09774 Vaccinium macrocarpon HOM05D007695 ORTHO05D009675 3.1e-23 112.5 83 59.0
Lalb_Chr25g0284741 Lupinus albus HOM05D007695 ORTHO05D009675 4.0e-23 112.1 76 65.8
VMungo0147G0001 Vigna mungo HOM05D007695 ORTHO05D009675 4.0e-23 112.1 86 60.5
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 5.3e-23 111.7 80 60.0
Sed0008622 Sechium edule HOM05D007695 ORTHO05D009675 5.3e-23 111.7 83 60.2
Nitab4.5_0007560g0010 Nicotiana tabacum HOM05D007695 ORTHO05D009675 6.9e-23 111.3 78 65.4
Glyma.08G167800 Glycine max HOM05D007695 ORTHO05D009675 9.0e-23 110.9 76 65.8
Peaxi162Scf00225g00098 Petunia axillaris HOM05D007695 ORTHO05D009675 9.0e-23 110.9 79 64.6
Psat1g013560 Pisum sativum HOM05D007695 ORTHO05D009675 9.0e-23 110.9 76 65.8
Lj3g0020370 Lotus japonicus HOM05D007695 ORTHO05D009675 1.5e-22 110.2 76 63.2
Eucgr.F04454 Eucalyptus grandis HOM05D007695 ORTHO05D009675 2.0e-22 109.8 76 65.8
HanXRQChr15g0494421 Helianthus annuus HOM05D007695 ORTHO05D009675 2.0e-22 109.8 76 65.8
Nitab4.5_0010557g0010 Nicotiana tabacum HOM05D007695 ORTHO05D009675 2.0e-22 109.8 78 64.1
TPR.G33812 Trifolium pratense HOM05D007695 ORTHO05D009675 2.0e-22 109.8 79 63.3
SalBow8G0946 Salvia bowleyana HOM05D007695 ORTHO05D009675 2.6e-22 109.4 83 59.0
Zm00001eb233100 Zea mays HOM05D007695 ORTHO05D009675 2.6e-22 109.4 75 66.7
CARHR072850 Cardamine hirsuta HOM05D007695 ORTHO05D009675 4.5e-22 108.6 78 60.3
PGR031G0168 Punica granatum HOM05D007695 ORTHO05D009675 4.5e-22 108.6 76 61.8
Sp5g34250 Schrenkiella parvula HOM05D007695 ORTHO05D009675 4.5e-22 108.6 77 61.0
RcHm_v2.0_Chr5g0025651 Rosa chinensis HOM05D007695 ORTHO05D009675 5.8e-22 108.2 76 63.2
Aqoxy1G01977 Aquilegia oxysepala HOM05D007695 ORTHO05D009675 7.6e-22 107.8 75 65.3
BraA07t31939Z Brassica rapa HOM05D007695 ORTHO05D009675 7.6e-22 107.8 77 59.7
ECA236G2936 Erigeron canadensis HOM05D007695 ORTHO05D009675 7.6e-22 107.8 75 65.3
Glyma.15G259802 Glycine max HOM05D007695 ORTHO05D009675 7.6e-22 107.8 76 63.2
BcaB02g08673 Brassica carinata HOM05D007695 ORTHO05D009675 9.9e-22 107.5 77 59.7
BcaC08g47483 Brassica carinata HOM05D007695 ORTHO05D009675 9.9e-22 107.5 77 59.7
A07p44310 Brassica napus HOM05D007695 ORTHO05D009675 9.9e-22 107.5 77 59.7
C06p53060 Brassica napus HOM05D007695 ORTHO05D009675 9.9e-22 107.5 77 59.7
BolC6t40323H Brassica oleracea HOM05D007695 ORTHO05D009675 9.9e-22 107.5 77 59.7
HPP92_016681 Vanilla planifolia HOM05D007695 ORTHO05D009675 1.7e-21 106.7 74 63.5
Cc05_g01290 Coffea canephora HOM05D007695 ORTHO05D009675 2.2e-21 106.3 73 65.8
PSO384G4287 Papaver somniferum HOM05D007695 ORTHO05D009675 2.2e-21 106.3 71 64.8
FAN11G1768 Fragaria x ananassa HOM05D007695 ORTHO05D009675 3.8e-21 105.5 79 59.5
FAN25G3643 Fragaria x ananassa HOM05D007695 ORTHO05D009675 3.8e-21 105.5 79 59.5
PSO339G5408 Papaver somniferum HOM05D007695 ORTHO05D009675 4.9e-21 105.1 71 63.4
FAN21G0117 Fragaria x ananassa HOM05D007695 ORTHO05D009675 1.1e-20 104.0 76 60.5
Thhalv10019257m.g Eutrema salsugineum HOM05D007695 ORTHO05D009675 1.4e-20 103.6 77 57.1
Hund12430 Selenicereus undatus HOM05D007695 ORTHO05D009675 1.4e-20 103.6 66 72.7
Aa31LG4G1810 Aethionema arabicum HOM05D007695 ORTHO05D009675 1.9e-20 103.2 77 58.4
AL2G39670 Arabidopsis lyrata HOM05D007695 ORTHO05D009675 1.9e-20 103.2 78 56.4
Carub.0002s2607 Capsella rubella HOM05D007695 ORTHO05D009675 3.2e-20 102.4 77 57.1
AT1G79200 Arabidopsis thaliana HOM05D007695 ORTHO05D009675 7.1e-20 101.3 77 57.1
FvH4_3g15210 Fragaria vesca HOM05D007695 ORTHO05D009675 9.3e-20 100.9 79 57.0
FAN16G2644 Fragaria x ananassa HOM05D007695 ORTHO05D009675 1.2e-19 100.5 79 57.0
THA.LOC104808131 Tarenaya hassleriana HOM05D007695 ORTHO05D009675 1.2e-19 100.5 75 60.0
unitig_748.g7621 Utricularia gibba HOM05D000001 ORTHO05D000003 2.3e-18 96.3 72 63.9
DCAR_016834 Daucus carota HOM05D007695 ORTHO05D009675 3.9e-18 95.5 162 45.1
SEGI_05035 Sequoiadendron giganteum HOM05D007695 ORTHO05D009675 3.3e-17 92.4 70 60.0
Ah.16g106010 Amaranthus hybridus HOM05D007695 ORTHO05D009675 6.2e-16 88.2 60 68.3
Mapoly0004s0265 Marchantia polymorpha HOM05D007695 ORTHO05D009675 6.2e-16 88.2 71 52.1
Pp3c22_2020 Physcomitrium patens HOM05D007695 ORTHO05D009675 6.2e-16 88.2 77 54.5
Peaxi162Scf00225g00095 Petunia axillaris HOM05D007695 ORTHO05D009675 6.5e-13 78.2 56 66.1
CBR_g3127 Chara braunii HOM05D000017 ORTHO05D000013 1.9e-12 76.6 69 55.1
Cre06.g255250 Chlamydomonas reinhardtii HOM05D007695 ORTHO05D009675 2.3e-10 69.7 72 41.7
SMO145G0213 Selaginella moellendorffii HOM05D007695 ORTHO05D009675 3.3e-09 65.9 54 55.6
Phvul.005G059400 Phaseolus vulgaris HOM05D007695 ORTHO05D009675 4.8e-08 62.0 39 71.8


User provided reference genes

Program Settings