Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc09g0006620 Simmondsia chinensis HOM05D004264 ORTHO05D004680 7.6e-107 390.6 208 100.0
Hund14916 Selenicereus undatus HOM05D004264 ORTHO05D004680 6.6e-34 148.3 148 55.4
TWI74G1571 Tripterygium wilfordii HOM05D004264 ORTHO05D004680 1.1e-31 141.0 148 52.7
Cfa017136 Carpinus fangiana HOM05D004264 ORTHO05D004680 3.8e-29 132.5 148 50.7
CiPaw.09G213400 Carya illinoinensis HOM05D004264 ORTHO05D004680 7.1e-28 128.3 148 50.7
Hma1.2p1_0479F.1_g161540 Hydrangea macrophylla HOM05D004264 ORTHO05D004680 4.6e-27 125.6 148 48.0
Manes.09G110101 Manihot esculenta HOM05D004264 ORTHO05D004680 1.0e-26 124.4 148 48.6
Atru.chr8.2305 Acer truncatum HOM05D004264 ORTHO05D004680 3.9e-26 122.5 148 46.6
TAR623G1256 Trochodendron aralioides HOM05D004264 ORTHO05D004680 3.9e-26 122.5 148 41.9
Thecc.05G009200 Theobroma cacao HOM05D004264 ORTHO05D004680 1.5e-25 120.6 148 49.3
Dinv08428 Davidia involucrata HOM05D004264 ORTHO05D008966 5.6e-25 118.6 148 45.3
Nn8g40771 Nelumbo nucifera HOM05D004264 ORTHO05D004680 7.3e-25 118.2 148 43.2
QL07p034201 Quercus lobata HOM05D004264 ORTHO05D004680 1.2e-24 117.5 107 58.9
ClCG04G006790 Citrullus lanatus HOM05D004264 ORTHO05D004680 1.6e-24 117.1 134 45.5
PGR004G2045 Punica granatum HOM05D004264 ORTHO05D004680 1.6e-24 117.1 148 43.9
Gohir.D01G219000 Gossypium hirsutum HOM05D004264 ORTHO05D004680 2.8e-24 116.3 148 45.9
Potri.016G122350 Populus trichocarpa HOM05D004264 ORTHO05D004680 3.6e-24 115.9 148 43.2
Duzib093G0558 Durio zibethinus HOM05D004264 ORTHO05D004680 1.1e-23 114.4 148 46.6
PSO801G0087 Papaver somniferum HOM05D004264 ORTHO05D004680 1.4e-23 114.0 148 42.6
Actinidia29078 Actinidia chinensis HOM05D004264 ORTHO05D004680 2.4e-23 113.2 148 43.2
Ah.12g058940 Amaranthus hybridus HOM05D004264 ORTHO05D004680 3.1e-23 112.8 152 45.4
CsaV3_4G026470 Cucumis sativus L. HOM05D004264 ORTHO05D004680 4.0e-23 112.5 148 40.5
MD12G1177600 Malus domestica HOM05D004264 ORTHO05D004680 6.9e-23 111.7 149 44.3
Prupe.6G283000 Prunus persica HOM05D004264 ORTHO05D004680 6.9e-23 111.7 107 57.9
Actinidia11558 Actinidia chinensis HOM05D004264 ORTHO05D004680 1.5e-22 110.5 148 43.9
Sed0006342 Sechium edule HOM05D004264 ORTHO05D004680 2.0e-22 110.2 148 38.5
PSO339G3729 Papaver somniferum HOM05D004264 ORTHO05D004680 2.6e-22 109.8 148 40.5
CANSAT35G1133 Cannabis sativa HOM05D004264 ORTHO05D004680 4.4e-22 109.0 148 40.5
Glyma.07G154451 Glycine max HOM05D004264 ORTHO05D004680 5.8e-22 108.6 149 42.3
Solyc04g072210.4 Solanum lycopersicum HOM05D004264 ORTHO05D004680 9.9e-22 107.8 144 45.1
Duzib106G1969 Durio zibethinus HOM05D004264 ORTHO05D004680 2.9e-21 106.3 141 46.8
Haze_21059 Corylus avellana HOM05D004264 ORTHO05D004680 6.4e-21 105.1 107 53.3
MD04G1163700 Malus domestica HOM05D004264 ORTHO05D004680 6.4e-21 105.1 148 42.6
Lj3g0014192 Lotus japonicus HOM05D004264 ORTHO05D004680 8.4e-21 104.8 148 41.2
Gorai.002G265700 Gossypium raimondii HOM05D004264 ORTHO05D004680 1.9e-20 103.6 148 43.9
Lsat_1_v5_gn_6_104820 Lactuca sativa HOM05D004264 ORTHO05D004680 1.9e-20 103.6 165 40.6
FAN02G3507 Fragaria x ananassa HOM05D004264 ORTHO05D004680 4.2e-20 102.4 148 41.9
FAN05G3264 Fragaria x ananassa HOM05D004264 ORTHO05D004680 4.2e-20 102.4 148 41.2
FAN05G1725 Fragaria x ananassa HOM05D004264 ORTHO05D004680 5.4e-20 102.1 148 41.2
FAN05G1746 Fragaria x ananassa HOM05D004264 ORTHO05D004680 5.4e-20 102.1 148 41.2
Gohir.A01G229100 Gossypium hirsutum HOM05D004264 ORTHO05D004680 5.4e-20 102.1 148 41.9
Ciclev10013172m.g Citrus clementina HOM05D004264 ORTHO05D004680 7.1e-20 101.7 107 48.6
THA.LOC104816187 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 9.3e-20 101.3 134 44.0
vmacro20314 Vaccinium macrocarpon HOM05D004264 ORTHO05D004680 1.2e-19 100.9 107 47.7
GSVIVG01030301001 Vitis vinifera HOM05D004264 ORTHO05D004680 1.2e-19 100.9 107 47.7
Cpa.g.sc120.22 Carica papaya HOM05D004264 ORTHO05D004680 4.6e-19 99.0 113 46.9
Rhsim05G0223600 Rhododendron simsii HOM05D004264 ORTHO05D004680 4.6e-19 99.0 107 48.6
vmacro05245 Vaccinium macrocarpon HOM05D004264 ORTHO05D004680 4.6e-19 99.0 107 50.5
VMungo1383G0816 Vigna mungo HOM05D004264 ORTHO05D004680 4.6e-19 99.0 148 41.9
FAN09G4226 Fragaria x ananassa HOM05D004264 ORTHO05D004680 7.8e-19 98.2 148 40.5
Glyma.18G205200 Glycine max HOM05D004264 ORTHO05D004680 7.8e-19 98.2 149 38.3
COL.COLO4_14480 Corchorus olitorius HOM05D004264 ORTHO05D004680 3.0e-18 96.3 148 41.2
vmacro05226 Vaccinium macrocarpon HOM05D004264 ORTHO05D004680 5.1e-18 95.5 107 48.6
ECA233G6002 Erigeron canadensis HOM05D004264 ORTHO05D004680 6.6e-18 95.1 166 39.8
DCAR_015367 Daucus carota HOM05D004264 ORTHO05D004680 8.7e-18 94.7 148 37.2
HanXRQChr13g0390241 Helianthus annuus HOM05D004264 ORTHO05D004680 1.1e-17 94.4 104 52.9
RcHm_v2.0_Chr3g0462181 Rosa chinensis HOM05D004264 ORTHO05D004680 1.9e-17 93.6 107 46.7
CARHR083200 Cardamine hirsuta HOM05D004264 ORTHO05D004680 2.5e-17 93.2 146 37.7
VMungo1383G0682 Vigna mungo HOM05D004264 ORTHO05D004680 3.3e-17 92.8 141 42.6
Lalb_Chr01g0023271 Lupinus albus HOM05D004264 ORTHO05D004680 4.3e-17 92.4 144 38.2
FAN14G2539 Fragaria x ananassa HOM05D004264 ORTHO05D004680 5.6e-17 92.0 107 46.7
Phvul.008G094300 Phaseolus vulgaris HOM05D004264 ORTHO05D004680 9.6e-17 91.3 163 38.0
Eucgr.G00894 Eucalyptus grandis HOM05D004264 ORTHO05D004680 1.3e-16 90.9 107 46.7
Sp3g07270 Schrenkiella parvula HOM05D004264 ORTHO05D004680 1.3e-16 90.9 148 36.5
TAR209G0008 Trochodendron aralioides HOM05D004264 ORTHO05D004680 1.3e-16 90.9 108 45.4
AL3G19870 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 2.1e-16 90.1 180 35.0
THA.LOC104827057 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 2.8e-16 89.7 148 37.8
FvH4_6g10920 Fragaria vesca HOM05D004264 ORTHO05D004680 3.6e-16 89.4 107 46.7
HanXRQChr02g0036811 Helianthus annuus HOM05D004264 ORTHO05D004680 4.8e-16 89.0 107 50.5
AT3G08880 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 8.1e-16 88.2 132 37.9
DCAR_018676 Daucus carota HOM05D004264 ORTHO05D004680 1.1e-15 87.8 107 41.1
Medtr1g100900 Medicago truncatula HOM05D004264 ORTHO05D004680 2.4e-15 86.7 147 37.4
Sopen04g028370 Solanum pennellii HOM05D004264 ORTHO05D004680 3.1e-15 86.3 103 46.6
Psat3g124240 Pisum sativum HOM05D004264 ORTHO05D004680 5.3e-15 85.5 145 37.2
EL10Ac5g12510 Beta vulgaris HOM05D004264 ORTHO05D004680 9.0e-15 84.7 148 40.5
Gohir.D11G227700 Gossypium hirsutum HOM05D004264 ORTHO05D004680 1.5e-14 84.0 107 43.9
AL6G10480 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 2.0e-14 83.6 138 37.7
Gohir.D10G240300 Gossypium hirsutum HOM05D004264 ORTHO05D004680 2.0e-14 83.6 107 44.9
Gorai.011G276000 Gossypium raimondii HOM05D004264 ORTHO05D004680 5.8e-14 82.0 107 43.9
AUR62030782 Chenopodium quinoa HOM05D004264 ORTHO05D004680 9.9e-14 81.3 148 39.9
MBI10_g27417_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 9.9e-14 81.3 149 35.6
Carub.0003s0799 Capsella rubella HOM05D004264 ORTHO05D004680 1.3e-13 80.9 134 37.3
MELO3C026013.2 Cucumis melo HOM05D004264 ORTHO05D004680 1.7e-13 80.5 107 39.3
Cpa.g.sc82.40 Carica papaya HOM05D004264 ORTHO05D004680 2.9e-13 79.7 97 47.4
AUR62030512 Chenopodium quinoa HOM05D004264 ORTHO05D004680 2.9e-13 79.7 148 39.2
Zm00001eb423320 Zea mays HOM05D004264 ORTHO05D004680 1.1e-12 77.8 139 34.5
Aa31LG1G23180 Aethionema arabicum HOM05D004264 ORTHO05D004680 1.2e-11 74.3 170 32.9
HPP92_011366 Vanilla planifolia HOM05D004264 ORTHO05D004680 1.2e-11 74.3 107 40.2
Migut.J00117 Erythranthe guttata HOM05D004264 ORTHO05D004680 1.6e-11 73.9 107 40.2
MSTRG.5553 Avicennia marina HOM05D004264 ORTHO05D004680 2.1e-11 73.6 107 37.4
Migut.D01629 Erythranthe guttata HOM05D004264 ORTHO05D004680 7.9e-11 71.6 107 38.3
Zm00001eb068100 Zea mays HOM05D004264 ORTHO05D004680 1.0e-10 71.2 142 28.2
Carub.0006s0026 Capsella rubella HOM05D004264 ORTHO05D004680 1.3e-10 70.9 143 35.0
BolC1t05486H Brassica oleracea HOM05D004264 ORTHO05D004680 3.9e-10 69.3 108 38.0
Aqoxy3G03065 Aquilegia oxysepala HOM05D004264 ORTHO05D004680 5.1e-10 68.9 105 37.1
Gorai.004G074900 Gossypium raimondii HOM05D004264 ORTHO05D004680 8.7e-10 68.2 127 37.0
Gohir.D01G029100 Gossypium hirsutum HOM05D004264 ORTHO05D004680 5.6e-09 65.5 81 43.2
Gohir.D12G051300 Gossypium hirsutum HOM05D004264 ORTHO05D004680 1.3e-08 64.3 81 42.0
Gohir.D04G142200 Gossypium hirsutum HOM05D004264 ORTHO05D004680 1.6e-08 63.9 81 42.0
SEGI_36861 Sequoiadendron giganteum HOM05D004264 ORTHO05D004680 1.6e-08 63.9 153 31.4
AT5G01570 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 4.8e-08 62.4 143 30.1
BcaNung00021 Brassica carinata HOM05D004264 ORTHO05D004680 1.8e-07 60.5 109 37.6
Thhalv10021618m.g Eutrema salsugineum HOM05D004264 ORTHO05D004680 5.3e-07 58.9 148 27.0
BcaB05g23097 Brassica carinata HOM05D004264 ORTHO05D004680 6.9e-07 58.5 108 36.1
Gorai.004G095600 Gossypium raimondii HOM05D004264 ORTHO05D004680 6.9e-07 58.5 121 33.9
BcaC09g48040 Brassica carinata HOM05D004264 ORTHO05D004680 9.0e-07 58.2 129 31.8
BNapus_Darmor_BZH_scaffold_167p00190 Brassica napus HOM05D004264 ORTHO05D004680 9.0e-07 58.2 129 31.8
A03p36330 Brassica napus HOM05D004264 ORTHO05D004680 1.2e-06 57.8 104 31.7
BcaC04g20357 Brassica carinata HOM05D004264 ORTHO05D004680 2.6e-06 56.6 106 34.0
BraA03t12802Z Brassica rapa HOM05D004264 ORTHO05D004680 3.4e-06 56.2 105 33.3
Gorai.011G076200 Gossypium raimondii HOM05D004264 ORTHO05D004680 3.4e-06 56.2 73 42.5
MBI03_g10315_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 3.4e-06 56.2 187 28.9
C03p54850 Brassica napus HOM05D004264 ORTHO05D004680 5.8e-06 55.5 100 35.0


User provided reference genes

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