Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc09g0006460 Simmondsia chinensis HOM05D000004 ORTHO05D000563 2.8e-48 194.9 93 100.0
Oeu010282.1 Olea europaea HOM05D000004 ORTHO05D000563 1.1e-09 66.6 88 40.9
Actinidia03258 Actinidia chinensis HOM05D057492 ORTHO05D000563 2.5e-09 65.5 68 50.0
Rhsim08G0065100 Rhododendron simsii HOM05D008333 ORTHO05D010371 3.3e-09 65.1 52 51.9
Rhsim02G0016700 Rhododendron simsii HOM05D003956 ORTHO05D004850 4.3e-09 64.7 52 50.0
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 4.3e-09 64.7 52 50.0
Thhalv10016056m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 9.6e-09 63.5 65 46.2
Rhsim04G0049200 Rhododendron simsii HOM05D000004 ORTHO05D000563 1.3e-08 63.2 52 48.1
PGR004G1008 Punica granatum HOM05D000004 ORTHO05D000002 1.6e-08 62.8 58 53.4
Rhsim07G0165900 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.6e-08 61.6 50 56.0
PGR119G1429 Punica granatum HOM05D000004 ORTHO05D000002 4.8e-08 61.2 48 60.4
PGR134G0003 Punica granatum HOM05D000004 ORTHO05D000002 4.8e-08 61.2 58 53.4
FvH4_4g08352 Fragaria vesca HOM05D000004 ORTHO05D000002 6.2e-08 60.8 54 55.6
PGR102G3222 Punica granatum HOM05D000004 ORTHO05D000002 6.2e-08 60.8 52 57.7
Rhsim02G0160700 Rhododendron simsii HOM05D000004 ORTHO05D000563 6.2e-08 60.8 79 43.0
Rhsim13G0219800 Rhododendron simsii HOM05D000004 ORTHO05D000563 6.2e-08 60.8 79 43.0
RhsimUnG0230800 Rhododendron simsii HOM05D000004 ORTHO05D000563 6.2e-08 60.8 79 43.0
Thhalv10027485m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 1.1e-07 60.1 53 54.7
PGR102G1331 Punica granatum HOM05D000004 ORTHO05D000002 1.1e-07 60.1 58 51.7
Atru.chr9.1417 Acer truncatum HOM05D000004 ORTHO05D000563 1.4e-07 59.7 72 43.1
TWI09G0867 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.4e-07 59.7 48 56.2
Rhsim02G0208700 Rhododendron simsii HOM05D000004 ORTHO05D000563 1.8e-07 59.3 50 54.0
Rhsim09G0023400 Rhododendron simsii HOM05D000004 ORTHO05D000563 1.8e-07 59.3 51 51.0
SHI23244 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-07 58.9 77 44.2
Actinidia12548 Actinidia chinensis HOM05D000004 ORTHO05D000563 3.1e-07 58.5 67 47.8
ECA246G2782 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.1e-07 58.5 53 56.6
PSO801G0002 Papaver somniferum HOM05D000004 ORTHO05D000002 3.1e-07 58.5 107 38.3
PGR031G3219 Punica granatum HOM05D000004 ORTHO05D000002 3.1e-07 58.5 86 38.4
Rhsim03G0265700 Rhododendron simsii HOM05D031804 ORTHO05D000563 5.3e-07 57.8 50 54.0
Rhsim04G0098200 Rhododendron simsii HOM05D000004 ORTHO05D000563 5.3e-07 57.8 52 44.2
RhsimUnG0129600 Rhododendron simsii HOM05D031804 ORTHO05D000563 5.3e-07 57.8 50 54.0
Sabra16G0279800 Salix brachista HOM05D000013 ORTHO05D000002 5.3e-07 57.8 91 37.4
PSO675G3106 Papaver somniferum HOM05D000004 ORTHO05D000002 6.9e-07 57.4 52 46.2
Sabra19G0021900 Salix brachista HOM05D000004 ORTHO05D000002 6.9e-07 57.4 61 42.6
SabraUnG0000900 Salix brachista HOM05D000004 ORTHO05D000002 6.9e-07 57.4 61 42.6
HanXRQChr07g0190251 Helianthus annuus HOM05D000004 ORTHO05D000002 9.0e-07 57.0 52 50.0
HanXRQChr10g0295121 Helianthus annuus HOM05D000004 ORTHO05D000002 9.0e-07 57.0 52 50.0
HanXRQChr13g0415051 Helianthus annuus HOM05D000004 ORTHO05D000002 9.0e-07 57.0 52 50.0
HanXRQChr16g0519861 Helianthus annuus HOM05D000004 ORTHO05D000002 9.0e-07 57.0 52 50.0
SHI09745 Sapria himalayana HOM05D000019 ORTHO05D000002 9.0e-07 57.0 54 46.3
BolC7t43890H Brassica oleracea HOM05D000004 ORTHO05D000563 1.2e-06 56.6 58 37.9
PGR142G1090 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-06 56.6 52 51.9
Sabra19G0020900 Salix brachista HOM05D000004 ORTHO05D000002 1.2e-06 56.6 61 42.6
Sp1g29630 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.2e-06 56.6 51 49.0
Thhalv10003071m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 1.5e-06 56.2 50 50.0
PSO017G5027 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-06 56.2 52 46.2
PSO063G4042 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-06 56.2 52 46.2
PSO161G0062 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-06 56.2 52 46.2
PSO478G0516 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-06 56.2 52 46.2
PSO478G0935 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-06 56.2 52 46.2
PSO675G1206 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-06 56.2 52 46.2
PSO724G0202 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-06 56.2 52 46.2
ECA246G4319 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.6e-06 55.5 62 48.4
PSO384G2288 Papaver somniferum HOM05D000004 ORTHO05D000002 2.6e-06 55.5 52 48.1
PSO675G4320 Papaver somniferum HOM05D000004 ORTHO05D000002 2.6e-06 55.5 107 35.5
TWI59G0527 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 2.6e-06 55.5 64 42.2
Thhalv10009839m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 3.4e-06 55.1 73 41.1
Thhalv10019697m.g Eutrema salsugineum HOM05D000004 ORTHO05D000563 4.4e-06 54.7 51 47.1
Sabra15G0032500 Salix brachista HOM05D004254 ORTHO05D000563 4.4e-06 54.7 52 46.2
ECA233G2099 Erigeron canadensis HOM05D000005 ORTHO05D000012 5.8e-06 54.3 53 50.9
ECA248G0299 Erigeron canadensis HOM05D000006 ORTHO05D000091 5.8e-06 54.3 62 50.0
Hma1.2p1_0229F.1_g097110 Hydrangea macrophylla HOM05D000004 ORTHO05D000563 5.8e-06 54.3 46 52.2
BolC2t10054H Brassica oleracea HOM05D000004 ORTHO05D000563 7.6e-06 53.9 49 49.0
BolC6t35188H Brassica oleracea HOM05D000004 ORTHO05D000563 7.6e-06 53.9 89 32.6
Rhsim06G0081400 Rhododendron simsii HOM05D000004 ORTHO05D000002 7.6e-06 53.9 52 40.4
PSO063G1221 Papaver somniferum HOM05D000004 ORTHO05D000002 9.9e-06 53.5 53 50.9
PSO170G0021 Papaver somniferum HOM05D000004 ORTHO05D000002 9.9e-06 53.5 104 32.7


User provided reference genes

Program Settings