Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc09g0005740 Simmondsia chinensis HOM05D005152 ORTHO05D006162 1.4e-136 489.6 245 100.0
Sc09g0005710 Simmondsia chinensis HOM05D005152 ORTHO05D006162 2.0e-58 229.9 188 66.5
Hund07432 Selenicereus undatus HOM05D005152 ORTHO05D006162 4.4e-53 212.2 165 64.8
Cc02_g30140 Coffea canephora HOM05D005152 ORTHO05D006162 1.7e-49 200.3 169 59.2
AUR62006555 Chenopodium quinoa HOM05D005152 ORTHO05D006162 2.3e-49 199.9 167 59.9
Actinidia24470 Actinidia chinensis HOM05D005152 ORTHO05D006162 2.8e-47 193.0 169 58.0
SalBow4G0649 Salvia bowleyana HOM05D005152 ORTHO05D006162 4.7e-47 192.2 169 57.4
TAR633G1644 Trochodendron aralioides HOM05D005152 ORTHO05D006162 1.0e-46 191.0 165 58.8
AUR62000209 Chenopodium quinoa HOM05D005152 ORTHO05D006162 1.8e-46 190.3 169 59.2
Ah.06g194700 Amaranthus hybridus HOM05D005152 ORTHO05D006178 3.0e-46 189.5 167 57.5
EL10Ac4g10101 Beta vulgaris HOM05D005152 ORTHO05D006162 3.0e-46 189.5 165 59.4
Lj2C487T6 Lonicera japonica HOM05D005152 ORTHO05D006162 3.0e-46 189.5 168 55.4
CAN.G1514.1 Capsicum annuum HOM05D005152 ORTHO05D006162 6.8e-46 188.3 171 54.4
PGSC0003DMG400017379 Solanum tuberosum HOM05D005152 ORTHO05D006162 6.8e-46 188.3 169 56.2
Rhsim13G0207600 Rhododendron simsii HOM05D005152 ORTHO05D006162 1.2e-45 187.6 174 55.7
Nn7g36798 Nelumbo nucifera HOM05D005152 ORTHO05D006162 1.5e-45 187.2 184 52.2
Sopen07g023910 Solanum pennellii HOM05D005152 ORTHO05D006162 2.6e-45 186.4 169 55.6
Nitab4.5_0000236g0070 Nicotiana tabacum HOM05D005152 ORTHO05D006162 5.7e-45 185.3 170 55.3
Solyc07g045370.3 Solanum lycopersicum HOM05D005152 ORTHO05D006162 5.7e-45 185.3 169 55.6
PSO339G4523 Papaver somniferum HOM05D005152 ORTHO05D006162 7.5e-45 184.9 168 54.2
MSTRG.20931 Avicennia marina HOM05D005152 ORTHO05D006162 9.8e-45 184.5 166 53.6
DCAR_002098 Daucus carota HOM05D005152 ORTHO05D006162 2.2e-44 183.3 156 54.5
PSO384G2750 Papaver somniferum HOM05D005152 ORTHO05D006162 2.9e-44 183.0 168 53.6
arahy.Tifrunner.gnm1.ann1.NHHR58 Arachis hypogaea HOM05D005152 ORTHO05D006162 3.7e-44 182.6 171 55.0
Prupe.3G132200 Prunus persica HOM05D005152 ORTHO05D006162 3.7e-44 182.6 175 54.3
arahy.Tifrunner.gnm1.ann1.3CD1QA Arachis hypogaea HOM05D005152 ORTHO05D006162 4.9e-44 182.2 171 55.0
Manes.02G136600 Manihot esculenta HOM05D005152 ORTHO05D006162 1.8e-43 180.3 176 50.6
vmacro12803 Vaccinium macrocarpon HOM05D005152 ORTHO05D006162 2.4e-43 179.9 169 53.3
Eucgr.J00691 Eucalyptus grandis HOM05D005152 ORTHO05D006162 3.2e-43 179.5 154 59.1
Prupe.4G267500 Prunus persica HOM05D005152 ORTHO05D006162 7.0e-43 178.3 188 52.1
MD08G1241200 Malus domestica HOM05D005152 ORTHO05D006162 1.6e-42 177.2 187 50.8
Potri.009G067800 Populus trichocarpa HOM05D005152 ORTHO05D006162 7.8e-42 174.9 175 50.9
MD15G1434100 Malus domestica HOM05D005152 ORTHO05D006162 1.3e-41 174.1 187 50.3
RcHm_v2.0_Chr7g0223811 Rosa chinensis HOM05D005152 ORTHO05D006162 1.3e-41 174.1 179 51.4
LjContig00564g0003451 Lotus japonicus HOM05D005152 ORTHO05D006162 1.7e-41 173.7 170 51.8
Peaxi162Scf00014g00212 Petunia axillaris HOM05D005152 ORTHO05D006162 1.7e-41 173.7 164 55.5
ECA238G0396 Erigeron canadensis HOM05D005152 ORTHO05D006162 2.3e-41 173.3 166 53.0
Lsat_1_v5_gn_2_33000 Lactuca sativa HOM05D005152 ORTHO05D006162 2.3e-41 173.3 168 51.2
Haze_23256 Corylus avellana HOM05D005152 ORTHO05D006162 3.0e-41 172.9 165 53.9
Potri.001G273600 Populus trichocarpa HOM05D005152 ORTHO05D006162 3.0e-41 172.9 177 49.7
FAN08G2618 Fragaria x ananassa HOM05D005152 ORTHO05D006162 3.9e-41 172.6 183 50.8
Thecc.03G310200 Theobroma cacao HOM05D005152 ORTHO05D006162 5.0e-41 172.2 184 51.1
Ciclev10014592m.g Citrus clementina HOM05D005152 ORTHO05D006162 1.1e-40 171.0 179 50.8
FAN13G1175 Fragaria x ananassa HOM05D005152 ORTHO05D006162 1.1e-40 171.0 183 50.3
Cfa009894 Carpinus fangiana HOM05D005152 ORTHO05D006162 1.5e-40 170.6 164 53.7
TWI75G0576 Tripterygium wilfordii HOM05D005152 ORTHO05D006162 1.5e-40 170.6 198 46.5
Gorai.003G185300 Gossypium raimondii HOM05D005152 ORTHO05D006162 1.9e-40 170.2 175 49.7
Ca_06203_v3 Cicer arietinum L. HOM05D005152 ORTHO05D006162 3.3e-40 169.5 170 51.2
Ca_06206_v3 Cicer arietinum L. HOM05D005152 ORTHO05D006162 3.3e-40 169.5 170 51.2
QL01p016753 Quercus lobata HOM05D005152 ORTHO05D006162 3.3e-40 169.5 164 52.4
Aqoxy1G00386 Aquilegia oxysepala HOM05D005152 ORTHO05D006162 5.6e-40 168.7 173 46.8
Gohir.D03G176100 Gossypium hirsutum HOM05D005152 ORTHO05D006162 5.6e-40 168.7 175 49.1
Glyma.02G278500 Glycine max HOM05D005152 ORTHO05D006162 9.5e-40 167.9 174 50.6
Gohir.A03G000034 Gossypium hirsutum HOM05D005152 ORTHO05D006162 9.5e-40 167.9 175 49.1
ClCG02G022750 Citrullus lanatus HOM05D005152 ORTHO05D006162 2.1e-39 166.8 182 51.1
ATR1096G100 Amborella trichopoda HOM05D005152 ORTHO05D006162 2.8e-39 166.4 155 50.3
COL.COLO4_16941 Corchorus olitorius HOM05D005152 ORTHO05D006162 2.8e-39 166.4 177 48.6
FAN04G0382 Fragaria x ananassa HOM05D005152 ORTHO05D006162 4.7e-39 165.6 183 49.2
Glyma.14G036100 Glycine max HOM05D005152 ORTHO05D006162 4.7e-39 165.6 169 51.5
Sed0006572 Sechium edule HOM05D005152 ORTHO05D006162 4.7e-39 165.6 182 50.5
FvH4_5g29960 Fragaria vesca HOM05D005152 ORTHO05D006162 6.2e-39 165.2 183 49.2
Phvul.008G202300 Phaseolus vulgaris HOM05D005152 ORTHO05D006162 1.4e-38 164.1 170 50.6
MELO3C014552.2 Cucumis melo HOM05D005152 ORTHO05D006162 3.1e-38 162.9 182 50.5
Aqoxy7G02965 Aquilegia oxysepala HOM05D005152 ORTHO05D006162 4.0e-38 162.5 149 51.7
Psat2g020920 Pisum sativum HOM05D005152 ORTHO05D006162 4.0e-38 162.5 171 50.9
HanXRQChr14g0432261 Helianthus annuus HOM05D005152 ORTHO05D006162 5.2e-38 162.2 168 51.2
CsaV3_6G038870 Cucumis sativus L. HOM05D005152 ORTHO05D006162 8.9e-38 161.4 182 49.5
VMungo0647G0059 Vigna mungo HOM05D005152 ORTHO05D006162 8.9e-38 161.4 171 49.1
MBI19_g42986_MAGBIO Magnolia biondii HOM05D005152 ORTHO05D006162 1.5e-37 160.6 159 52.2
SEGI_04037 Sequoiadendron giganteum HOM05D005152 ORTHO05D006162 7.5e-37 158.3 168 48.2
Atru.chr11.1399 Acer truncatum HOM05D005152 ORTHO05D006162 9.8e-37 157.9 175 47.4
CANSAT11G0534 Cannabis sativa HOM05D005152 ORTHO05D006162 9.8e-37 157.9 164 50.0
CDE04G1157 Ceratophyllum demersum HOM05D005152 ORTHO05D006162 1.9e-35 153.7 150 52.0
Migut.A00480 Erythranthe guttata HOM05D005152 ORTHO05D006162 3.2e-35 152.9 158 46.8
HPP92_019896 Vanilla planifolia HOM05D005152 ORTHO05D006162 4.1e-35 152.5 155 51.6
TPR.G16391 Trifolium pratense HOM05D005152 ORTHO05D006162 7.0e-35 151.8 168 47.6
Sabra09G0050800 Salix brachista HOM05D005152 ORTHO05D006162 1.2e-34 151.0 218 40.8
Aa31LG3G15010 Aethionema arabicum HOM05D005152 ORTHO05D006162 2.0e-34 150.2 168 45.8
Medtr5g089190 Medicago truncatula HOM05D005152 ORTHO05D006162 2.7e-34 149.8 173 48.0
PGR119G0699 Punica granatum HOM05D005152 ORTHO05D006162 6.0e-34 148.7 151 49.7
THA.LOC104799141 Tarenaya hassleriana HOM05D005152 ORTHO05D006162 6.0e-34 148.7 188 43.6
CDE07G1900 Ceratophyllum demersum HOM05D005152 ORTHO05D006162 1.3e-33 147.5 150 50.7
THA.LOC104816332 Tarenaya hassleriana HOM05D005152 ORTHO05D006162 3.9e-33 146.0 174 45.4
A03p05460 Brassica napus HOM05D005152 ORTHO05D006162 1.9e-32 143.7 174 43.1
FAN18G0878 Fragaria x ananassa HOM05D005152 ORTHO05D006162 2.5e-32 143.3 157 49.0
Carub.0006s1072 Capsella rubella HOM05D005152 ORTHO05D006162 3.3e-32 142.9 155 48.4
C03p06370 Brassica napus HOM05D005152 ORTHO05D006162 9.5e-32 141.4 174 42.5
BraA03t09884Z Brassica rapa HOM05D005152 ORTHO05D006162 9.5e-32 141.4 174 42.5
Thhalv10012989m.g Eutrema salsugineum HOM05D005152 ORTHO05D006162 9.5e-32 141.4 155 47.7
Lalb_Chr10g0106191 Lupinus albus HOM05D005152 ORTHO05D006162 9.5e-32 141.4 150 48.0
Os12g0189900 Oryza sativa ssp. japonica HOM05D005152 ORTHO05D006162 9.5e-32 141.4 152 51.3
AT5G12220 Arabidopsis thaliana HOM05D005152 ORTHO05D006162 1.6e-31 140.6 152 48.0
BolC3t13143H Brassica oleracea HOM05D005152 ORTHO05D006162 2.1e-31 140.2 168 43.5
Zm00001eb150380 Zea mays HOM05D005152 ORTHO05D006162 2.8e-31 139.8 152 50.7
BcaB01g05418 Brassica carinata HOM05D005152 ORTHO05D006162 4.7e-31 139.0 155 47.1
Sp6g31420 Schrenkiella parvula HOM05D005152 ORTHO05D006162 6.2e-31 138.7 155 47.1
AL6G23010 Arabidopsis lyrata HOM05D005152 ORTHO05D006162 1.1e-30 137.9 152 47.4
CARHR200900 Cardamine hirsuta HOM05D005152 ORTHO05D006162 1.4e-30 137.5 150 47.3
TAR636G3031 Trochodendron aralioides HOM05D005152 ORTHO05D006162 1.4e-30 137.5 126 54.8
Duzib205G1611 Durio zibethinus HOM05D005152 ORTHO05D006162 2.3e-30 136.7 167 42.5
SGA_v2.0_scaffold96G29125 Striga asiatica HOM05D005152 ORTHO05D006162 5.2e-30 135.6 140 48.6
Nitab4.5_0000975g0020 Nicotiana tabacum HOM05D005152 ORTHO05D006162 6.0e-26 122.1 171 45.0
CAN.G437.19 Capsicum annuum HOM05D005152 ORTHO05D006162 7.8e-26 121.7 123 46.3
SGA_v2.0_scaffold79G25574 Striga asiatica HOM05D005152 ORTHO05D006162 3.0e-25 119.8 107 54.2
GSVIVG01029301001 Vitis vinifera HOM05D005152 ORTHO05D006162 6.6e-25 118.6 88 62.5
SMO361G0105 Selaginella moellendorffii HOM05D005152 ORTHO05D006162 4.3e-24 115.9 149 38.9
Oeu046803.1 Olea europaea HOM05D005152 ORTHO05D006162 9.5e-24 114.8 83 60.2
Pp3c5_25710 Physcomitrium patens HOM05D005152 ORTHO05D006162 4.7e-23 112.5 141 40.4
Pp3c25_13080 Physcomitrium patens HOM05D005152 ORTHO05D006162 6.2e-23 112.1 148 37.8
AagrBONN_evm.TU.Sc2ySwM_228.1465 Anthoceros agrestis HOM05D005152 ORTHO05D006162 1.1e-22 111.3 146 38.4
Mapoly0027s0150 Marchantia polymorpha HOM05D005152 ORTHO05D006162 4.0e-22 109.4 149 38.3
Sc09g0005720 Simmondsia chinensis HOM05D005152 ORTHO05D006162 4.0e-22 109.4 87 59.8
unitig_748.g8148 Utricularia gibba HOM05D005152 ORTHO05D006162 4.0e-22 109.4 117 49.6
Sc09g0005680 Simmondsia chinensis HOM05D005152 ORTHO05D006162 2.2e-20 103.6 69 72.5
Sc09g0005660 Simmondsia chinensis HOM05D005152 ORTHO05D006162 6.6e-17 92.0 56 76.8
Hund07429 Selenicereus undatus HOM05D005152 ORTHO05D006162 1.2e-15 87.8 102 46.1
MCO05G618 Micromonas commoda HOM05D005152 ORTHO05D006162 2.1e-15 87.0 147 35.4
GSVIVG01029300001 Vitis vinifera HOM05D005152 ORTHO05D006162 2.1e-15 87.0 106 44.3
Oeu046802.1 Olea europaea HOM05D005152 ORTHO05D006162 2.9e-12 76.6 74 55.4
Sc09g0005650 Simmondsia chinensis HOM05D005152 ORTHO05D006162 4.2e-11 72.8 62 66.1
CiPaw.14G111400 Carya illinoinensis HOM05D005152 ORTHO05D006162 6.0e-10 68.9 71 49.3
CBR_g41105 Chara braunii HOM05D001740 ORTHO05D001468 1.7e-09 67.4 169 30.8
Oeu022376.1 Olea europaea HOM05D005152 ORTHO05D006162 1.5e-08 64.3 74 51.4
Cpa.g.sc189.1 Carica papaya HOM05D005152 ORTHO05D006162 1.3e-07 61.2 56 53.6
Aqoxy4G01955 Aquilegia oxysepala HOM05D005152 ORTHO05D006162 3.1e-06 56.6 75 44.0


User provided reference genes

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