Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 2.0e-267 925.2 477 100.0
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 7.0e-188 661.0 465 76.3
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 2.2e-181 639.4 477 71.9
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 2.2e-181 639.4 469 72.3
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 6.3e-181 637.9 480 71.0
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 9.1e-180 634.0 476 73.3
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 1.2e-179 633.6 484 70.5
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 1.7e-178 629.8 469 71.4
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 1.7e-178 629.8 469 71.6
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 2.2e-178 629.4 479 71.2
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 5.0e-178 628.2 471 72.2
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 1.1e-177 627.1 471 71.1
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 2.5e-177 625.9 465 71.6
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 2.5e-177 625.9 469 71.6
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 2.5e-177 625.9 431 76.1
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 2.5e-177 625.9 431 76.1
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 3.2e-177 625.5 470 70.4
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 3.2e-177 625.5 431 75.6
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 7.2e-177 624.4 469 71.4
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 1.2e-176 623.6 469 71.0
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 2.1e-176 622.9 469 71.6
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 3.6e-176 622.1 469 70.6
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 4.7e-176 621.7 439 73.8
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 8.0e-176 620.9 459 71.5
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 3.0e-175 619.0 433 75.1
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 4.0e-175 618.6 470 70.2
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 8.8e-175 617.5 470 70.0
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 1.2e-174 617.1 433 74.1
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 1.5e-174 616.7 441 73.7
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 1.5e-174 616.7 462 71.2
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 2.0e-174 616.3 469 70.6
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 1.3e-173 613.6 461 71.1
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 3.7e-173 612.1 433 74.6
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 3.7e-173 612.1 469 70.1
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 2.4e-172 609.4 469 69.9
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 9.1e-172 607.4 457 71.1
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 1.6e-171 606.7 472 69.7
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 5.9e-171 604.7 432 73.6
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 1.3e-170 603.6 473 69.3
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 5.0e-170 601.7 445 73.3
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 6.5e-170 601.3 469 68.9
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 8.5e-170 600.9 450 71.3
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 8.5e-170 600.9 444 70.9
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 1.2e-168 597.0 425 76.0
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 1.6e-168 596.7 463 69.3
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 8.8e-167 590.9 476 67.4
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 1.2e-166 590.5 474 68.8
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 1.5e-166 590.1 479 67.8
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 1.3e-165 587.0 441 70.5
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 3.7e-165 585.5 461 68.8
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 6.3e-165 584.7 436 70.0
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 8.3e-165 584.3 483 65.0
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 1.1e-164 583.9 436 70.0
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 1.4e-164 583.6 470 67.7
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 1.4e-164 583.6 467 66.4
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 1.8e-164 583.2 473 67.4
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.8e-164 583.2 432 70.4
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 2.4e-164 582.8 432 70.1
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 2.4e-164 582.8 436 70.2
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 3.1e-164 582.4 470 67.0
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 4.1e-164 582.0 467 66.2
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 2.0e-163 579.7 461 68.1
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 2.7e-163 579.3 478 65.7
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 2.7e-163 579.3 467 66.0
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 1.0e-162 577.4 441 69.2
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 1.3e-162 577.0 470 67.2
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.7e-162 576.6 454 67.2
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 1.5e-161 573.5 473 66.6
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 4.3e-161 572.0 461 65.7
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 7.3e-161 571.2 473 65.5
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 9.5e-161 570.9 470 66.4
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 1.6e-160 570.1 423 71.4
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 2.1e-160 569.7 471 66.5
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 2.8e-160 569.3 432 68.5
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 2.8e-160 569.3 567 59.6
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 4.7e-160 568.5 460 68.3
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 4.7e-160 568.5 425 71.8
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 6.1e-160 568.2 492 64.4
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 2.3e-159 566.2 425 69.4
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 3.0e-159 565.8 486 64.4
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 6.8e-159 564.7 469 65.9
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 1.2e-158 563.9 463 67.0
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 1.5e-158 563.5 481 64.4
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 5.7e-158 561.6 412 73.5
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 7.0e-156 554.7 433 67.9
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 1.3e-154 550.4 432 67.4
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 1.7e-154 550.1 472 64.8
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 5.6e-153 545.0 470 64.0
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 3.6e-152 542.3 429 68.3
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 1.2e-147 527.3 555 55.1
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 6.2e-144 515.0 484 57.9
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 1.8e-143 513.5 445 61.1
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 8.9e-143 511.1 415 64.3
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 1.7e-141 506.9 441 60.3
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 3.7e-141 505.8 422 65.9
HPP92_022084 Vanilla planifolia HOM05D004787 ORTHO05D006972 5.4e-140 501.9 396 67.2
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 1.7e-130 470.3 481 54.3
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 1.7e-130 470.3 481 54.3
Oeu022144.1 Olea europaea HOM05D004787 ORTHO05D006972 3.0e-130 469.5 385 66.2
Cpa.g.sc108.2 Carica papaya HOM05D004787 ORTHO05D006972 2.9e-125 453.0 350 69.7
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 1.5e-118 430.6 461 51.6
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 4.5e-118 429.1 420 54.8
CAN.G809.96 Capsicum annuum HOM05D004787 ORTHO05D006972 2.2e-117 426.8 310 71.6
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 4.8e-112 409.1 289 73.4
HanXRQChr16g0532221 Helianthus annuus HOM05D004787 ORTHO05D006972 2.3e-90 337.0 449 49.7
AL1G49080 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 2.5e-89 333.6 240 72.1
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 1.8e-87 327.4 255 70.6
Cre02.g093300 Chlamydomonas reinhardtii HOM05D004787 ORTHO05D006972 2.8e-80 303.5 433 43.2
CDE02G3895 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 3.9e-74 283.1 303 55.8
MCO05G673 Micromonas commoda HOM05D004787 ORTHO05D006972 5.2e-74 282.7 475 38.9
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 2.2e-72 277.3 198 72.2
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 2.8e-72 276.9 198 71.7
PRCOL_00000524 Prasinoderma coloniale HOM05D004787 ORTHO05D006972 6.1e-67 259.2 439 37.4
Cpa.g.sc108.3 Carica papaya HOM05D004787 ORTHO05D006972 2.2e-40 171.0 121 73.6
Cc07_g12650 Coffea canephora HOM05D004787 ORTHO05D006972 2.3e-37 161.0 102 77.5
Cfa023088 Carpinus fangiana HOM05D004787 ORTHO05D006972 3.4e-33 147.1 482 29.9
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 4.4e-33 146.7 361 33.8
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 7.0e-31 139.4 406 32.3
Oeu031707.1 Olea europaea HOM05D004787 ORTHO05D006972 7.3e-28 129.4 73 87.7
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 9.2e-23 112.5 241 38.6
PSO063G0274 Papaver somniferum HOM05D004787 ORTHO05D006972 6.6e-21 106.3 326 31.0
PSO675G3772 Papaver somniferum HOM05D004787 ORTHO05D302583 6.6e-21 106.3 294 33.0
Medtr8g023320 Medicago truncatula HOM05D004787 ORTHO05D006972 1.1e-20 105.5 115 50.4
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 6.2e-19 99.8 327 30.3
Zm00001eb168130 Zea mays HOM05D004787 ORTHO05D001664 8.1e-19 99.4 74 62.2
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 1.5e-17 95.1 335 30.7
PSO063G2684 Papaver somniferum HOM05D004787 ORTHO05D304724 2.6e-17 94.4 283 32.2
PSO478G2704 Papaver somniferum HOM05D004787 ORTHO05D303020 2.9e-16 90.9 277 30.0
PSO675G1486 Papaver somniferum HOM05D004787 ORTHO05D006972 2.9e-16 90.9 243 32.1
PSO063G4343 Papaver somniferum HOM05D004787 ORTHO05D304254 3.8e-16 90.5 283 31.8
PSO541G2889 Papaver somniferum HOM05D004787 ORTHO05D303989 6.4e-16 89.7 230 31.3
PSO339G2591 Papaver somniferum HOM05D004787 ORTHO05D006972 1.4e-15 88.6 205 36.1
PSO339G2032 Papaver somniferum HOM05D004787 ORTHO05D006972 1.9e-15 88.2 205 35.6
PSO675G0768 Papaver somniferum HOM05D004787 ORTHO05D302482 2.7e-14 84.3 197 32.0
PSO170G0972 Papaver somniferum HOM05D004787 ORTHO05D303930 7.3e-12 76.3 244 29.9
HPP92_022083 Vanilla planifolia HOM05D004787 ORTHO05D006972 7.3e-12 76.3 55 69.1
PSO384G4943 Papaver somniferum HOM05D004787 ORTHO05D303805 3.6e-11 73.9 244 30.3
PSO478G1956 Papaver somniferum HOM05D004787 ORTHO05D006972 4.0e-10 70.5 177 36.2
PSO478G4874 Papaver somniferum HOM05D004787 ORTHO05D006972 4.0e-10 70.5 177 36.2
PSO198G0032 Papaver somniferum HOM05D004787 ORTHO05D006972 1.3e-08 65.5 138 37.0
PSO063G0043 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-07 62.4 259 27.4
PSO063G3648 Papaver somniferum HOM05D004787 ORTHO05D006972 1.4e-07 62.0 97 41.2
PSO063G5300 Papaver somniferum HOM05D004787 ORTHO05D006972 1.2e-06 58.9 97 40.2
Pp3c24_2440 Physcomitrium patens HOM05D004787 ORTHO05D313483 3.5e-06 57.4 79 43.0
RcHm_v2.0_Chr5g0002281 Rosa chinensis HOM05D003404 ORTHO05D029456 6.0e-06 56.6 32 78.1


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