Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc09g0004450 Simmondsia chinensis HOM05D004862 ORTHO05D005841 5.8e-305 1050.0 520 100.0
Hund06875 Selenicereus undatus HOM05D004862 ORTHO05D005841 3.6e-238 828.2 492 79.7
AUR62003397 Chenopodium quinoa HOM05D004862 ORTHO05D005841 4.1e-234 814.7 485 79.4
Ah.04g163010 Amaranthus hybridus HOM05D004862 ORTHO05D005841 3.5e-233 811.6 483 80.5
EL10Ac4g08938 Beta vulgaris HOM05D004862 ORTHO05D005841 2.1e-230 802.4 485 78.4
Dinv24234 Davidia involucrata HOM05D004862 ORTHO05D005841 4.9e-227 791.2 488 77.0
CSS0027197 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 1.8e-226 789.3 495 74.9
CSS0014529 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 3.2e-226 788.5 495 74.9
Nn1g06191 Nelumbo nucifera HOM05D004862 ORTHO05D005841 4.1e-226 788.1 484 76.7
COL.COLO4_33088 Corchorus olitorius HOM05D004862 ORTHO05D005841 1.2e-225 786.6 487 77.0
Thecc.02G156500 Theobroma cacao HOM05D004862 ORTHO05D005841 2.3e-224 782.3 487 77.2
Aqoxy6G00342 Aquilegia oxysepala HOM05D004862 ORTHO05D005841 2.9e-224 781.9 479 76.0
DCAR_021834 Daucus carota HOM05D004862 ORTHO05D005841 3.9e-224 781.6 483 74.3
Ciclev10015108m.g Citrus clementina HOM05D004862 ORTHO05D005841 5.0e-224 781.2 479 77.2
Duzib132G0210 Durio zibethinus HOM05D004862 ORTHO05D005841 1.5e-223 779.6 487 77.0
Cfa010154 Carpinus fangiana HOM05D004862 ORTHO05D005841 4.3e-223 778.1 480 76.0
Manes.14G165200 Manihot esculenta HOM05D004862 ORTHO05D005841 4.3e-223 778.1 479 76.8
Rhsim11G0133700 Rhododendron simsii HOM05D004862 ORTHO05D005841 9.5e-223 776.9 491 74.9
Gohir.A01G012300 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.6e-222 776.2 487 76.2
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea HOM05D004862 ORTHO05D005841 3.6e-222 775.0 484 75.0
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea HOM05D004862 ORTHO05D005841 8.0e-222 773.9 484 75.0
Cc02_g18820 Coffea canephora HOM05D004862 ORTHO05D005841 1.4e-221 773.1 484 75.8
Gohir.D13G060400 Gossypium hirsutum HOM05D004862 ORTHO05D005841 3.1e-221 771.9 486 77.4
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 6.8e-221 770.8 480 75.2
MD12G1223100 Malus domestica HOM05D004862 ORTHO05D005841 6.8e-221 770.8 482 74.5
CiPaw.13G145700 Carya illinoinensis HOM05D004862 ORTHO05D005841 2.0e-220 769.2 486 74.5
Phvul.002G205600 Phaseolus vulgaris HOM05D004862 ORTHO05D005841 3.4e-220 768.5 484 75.4
Gorai.002G015300 Gossypium raimondii HOM05D004862 ORTHO05D005841 4.4e-220 768.1 487 75.8
Lj5A244T54 Lonicera japonica HOM05D004862 ORTHO05D005841 1.3e-219 766.5 480 75.6
Gorai.013G068500 Gossypium raimondii HOM05D004862 ORTHO05D005841 1.7e-219 766.1 500 75.4
CDE02G2941 Ceratophyllum demersum HOM05D004862 ORTHO05D005841 3.7e-219 765.0 479 74.9
Nitab4.5_0005079g0020 Nicotiana tabacum HOM05D004862 ORTHO05D005841 8.3e-219 763.8 491 72.9
CANSAT54G0577 Cannabis sativa HOM05D004862 ORTHO05D005841 1.1e-218 763.5 486 73.7
Glyma.05G121000 Glycine max HOM05D004862 ORTHO05D005841 1.1e-218 763.5 484 74.0
Lsat_1_v5_gn_9_117961 Lactuca sativa HOM05D004862 ORTHO05D005841 3.2e-218 761.9 483 74.9
Glyma.08G075600 Glycine max HOM05D004862 ORTHO05D005841 4.1e-218 761.5 484 74.4
SGA_v2.0_scaffold332G48937 Striga asiatica HOM05D004862 ORTHO05D005841 5.4e-218 761.1 479 76.0
FAN14G4788 Fragaria x ananassa HOM05D004862 ORTHO05D005841 7.0e-218 760.8 479 73.7
Prupe.6G329700 Prunus persica HOM05D004862 ORTHO05D005841 7.0e-218 760.8 480 73.8
Potri.001G207000 Populus trichocarpa HOM05D004862 ORTHO05D005841 1.2e-217 760.0 479 74.3
MELO3C012691.2 Cucumis melo HOM05D004862 ORTHO05D005841 1.6e-217 759.6 481 75.7
FAN14G5837 Fragaria x ananassa HOM05D004862 ORTHO05D005841 2.7e-217 758.8 479 73.5
FAN05G4126 Fragaria x ananassa HOM05D004862 ORTHO05D005841 4.6e-217 758.1 479 73.5
FvH4_6g05370 Fragaria vesca HOM05D004862 ORTHO05D005841 6.0e-217 757.7 479 73.5
MBI06_g20970_MAGBIO Magnolia biondii HOM05D004862 ORTHO05D005841 7.8e-217 757.3 487 74.5
Nitab4.5_0000078g0200 Nicotiana tabacum HOM05D004862 ORTHO05D005841 1.0e-216 756.9 491 72.5
Oeu000228.1 Olea europaea HOM05D004862 ORTHO05D005841 1.3e-216 756.5 480 74.8
Gohir.A13G061500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.1e-215 753.4 462 78.1
FAN02G3155 Fragaria x ananassa HOM05D004862 ORTHO05D005841 2.5e-215 752.3 479 73.1
Medtr4g094315 Medicago truncatula HOM05D004862 ORTHO05D005841 3.3e-215 751.9 484 74.2
RcHm_v2.0_Chr3g0454151 Rosa chinensis HOM05D004862 ORTHO05D005841 4.3e-215 751.5 479 72.7
ClCG09G014610 Citrullus lanatus HOM05D004862 ORTHO05D005841 5.6e-215 751.1 480 74.6
Sed0027136 Sechium edule HOM05D004862 ORTHO05D005841 9.5e-215 750.4 480 75.0
VMungo0251G1232 Vigna mungo HOM05D004862 ORTHO05D005841 9.5e-215 750.4 509 71.9
ATR1136G066 Amborella trichopoda HOM05D004862 ORTHO05D005841 1.2e-214 750.0 488 72.7
Ca_29818_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 1.2e-214 750.0 485 74.0
vmacro01803 Vaccinium macrocarpon HOM05D004862 ORTHO05D005841 2.1e-214 749.2 572 65.4
CAN.G1.65 Capsicum annuum HOM05D004862 ORTHO05D005841 2.8e-214 748.8 479 72.9
PSO675G5038 Papaver somniferum HOM05D004862 ORTHO05D005841 2.8e-214 748.8 483 73.3
PGR042G3925 Punica granatum HOM05D004862 ORTHO05D005841 2.8e-214 748.8 483 73.5
AUR62004780 Chenopodium quinoa HOM05D004862 ORTHO05D005841 3.6e-214 748.4 540 68.5
Solyc10g047120.2 Solanum lycopersicum HOM05D004862 ORTHO05D005841 4.7e-214 748.0 482 73.0
Sopen10g017280 Solanum pennellii HOM05D004862 ORTHO05D005841 1.1e-213 746.9 482 73.0
PSO541G6054 Papaver somniferum HOM05D004862 ORTHO05D005841 1.8e-213 746.1 488 73.2
Thhalv10004120m.g Eutrema salsugineum HOM05D004862 ORTHO05D005841 3.1e-213 745.3 479 72.7
Gohir.D01G013500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 3.1e-213 745.3 467 75.4
HanXRQChr03g0065771 Helianthus annuus HOM05D004862 ORTHO05D005841 3.1e-213 745.3 479 73.1
FAN09G3019 Fragaria x ananassa HOM05D004862 ORTHO05D005841 4.0e-213 745.0 479 72.4
TWI23G0249 Tripterygium wilfordii HOM05D004862 ORTHO05D005841 6.8e-213 744.2 479 72.7
Lj4g0019477 Lotus japonicus HOM05D004862 ORTHO05D005841 8.9e-213 743.8 485 73.8
MSTRG.16558 Avicennia marina HOM05D004862 ORTHO05D005841 1.5e-212 743.0 479 73.9
CARHR147430 Cardamine hirsuta HOM05D004862 ORTHO05D005841 4.4e-212 741.5 480 73.1
ECA240G2004 Erigeron canadensis HOM05D004862 ORTHO05D005841 5.8e-212 741.1 473 74.2
Carub.0005s0438 Capsella rubella HOM05D004862 ORTHO05D005841 1.3e-211 740.0 479 72.4
Lalb_Chr07g0189371 Lupinus albus HOM05D004862 ORTHO05D005841 2.9e-211 738.8 488 72.7
Sp2g15560 Schrenkiella parvula HOM05D004862 ORTHO05D005841 4.9e-211 738.0 479 72.4
PGSC0003DMG400017691 Solanum tuberosum HOM05D004862 ORTHO05D005841 6.4e-211 737.6 518 68.7
CsaV3_7G022230 Cucumis sativus L. HOM05D004862 ORTHO05D005841 8.3e-211 737.3 469 75.1
AT3G26410 Arabidopsis thaliana HOM05D004862 ORTHO05D005841 1.1e-210 736.9 479 71.6
Psat7g096360 Pisum sativum HOM05D004862 ORTHO05D005841 1.1e-210 736.9 484 71.9
Migut.B00646 Erythranthe guttata HOM05D004862 ORTHO05D005841 1.4e-210 736.5 479 71.6
A06p42030 Brassica napus HOM05D004862 ORTHO05D005841 1.9e-210 736.1 479 72.2
C07p35450 Brassica napus HOM05D004862 ORTHO05D005841 1.9e-210 736.1 479 72.0
BolC7t44069H Brassica oleracea HOM05D004862 ORTHO05D005841 1.9e-210 736.1 479 72.0
THA.LOC104818254 Tarenaya hassleriana HOM05D004862 ORTHO05D005841 1.9e-210 736.1 479 71.8
BraA06t27120Z Brassica rapa HOM05D004862 ORTHO05D005841 2.4e-210 735.7 479 72.2
Lj9A317G73 Lonicera japonica HOM05D004862 ORTHO05D005841 5.4e-210 734.6 491 71.3
AL5G15180 Arabidopsis lyrata HOM05D004862 ORTHO05D005841 7.1e-210 734.2 479 71.8
BolC2t11381H Brassica oleracea HOM05D004862 ORTHO05D005841 7.1e-210 734.2 479 71.4
Aa31LG2G6120 Aethionema arabicum HOM05D004862 ORTHO05D005841 1.3e-208 729.9 479 71.2
BraA02t08465Z Brassica rapa HOM05D004862 ORTHO05D005841 1.3e-208 729.9 479 71.4
BcaB07g30229 Brassica carinata HOM05D004862 ORTHO05D005841 4.7e-206 721.5 479 70.6
Os02g0556400 Oryza sativa ssp. japonica HOM05D004862 ORTHO05D005841 4.7e-206 721.5 482 70.7
QL01p020593 Quercus lobata HOM05D004862 ORTHO05D005841 4.7e-206 721.5 574 62.0
BcaC03g17366 Brassica carinata HOM05D004862 ORTHO05D005841 8.1e-206 720.7 503 68.0
SalBow5G3806 Salvia bowleyana HOM05D004862 ORTHO05D005841 2.4e-202 709.1 568 63.4
Sabra01G0160300 Salix brachista HOM05D004862 ORTHO05D005841 7.1e-202 707.6 563 62.3
SalBow5G4932 Salvia bowleyana HOM05D004862 ORTHO05D005841 1.9e-199 699.5 593 60.7
GSVIVG01029751001 Vitis vinifera HOM05D004862 ORTHO05D005841 5.2e-197 691.4 479 70.1
BcaNung06886 Brassica carinata HOM05D004862 ORTHO05D005841 1.9e-194 682.9 490 67.6
C02p53070 Brassica napus HOM05D004862 ORTHO05D005841 5.4e-194 681.4 503 65.8
SHI16537 Sapria himalayana HOM05D004862 ORTHO05D005841 1.2e-193 680.2 480 68.3
Peaxi162Scf00003g03739 Petunia axillaris HOM05D004862 ORTHO05D005841 5.3e-189 664.8 411 76.6
Ciclev10008412m.g Citrus clementina HOM05D004862 ORTHO05D005841 2.2e-187 659.4 447 71.1
Eucgr.G00660 Eucalyptus grandis HOM05D004862 ORTHO05D005841 6.4e-187 657.9 411 74.9
A02p34570 Brassica napus HOM05D004862 ORTHO05D005841 8.4e-179 630.9 411 72.3
Mapoly0006s0193 Marchantia polymorpha HOM05D004862 ORTHO05D005841 1.3e-176 623.6 484 62.2
SEGI_34202 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 3.3e-175 619.0 426 69.0
TAR116G0002 Trochodendron aralioides HOM05D004862 ORTHO05D005841 3.7e-174 615.5 375 77.6
Pp3c13_18080 Physcomitrium patens HOM05D004862 ORTHO05D005841 9.0e-173 610.9 493 58.6
SMO115G0021 Selaginella moellendorffii HOM05D004862 ORTHO05D005841 8.4e-171 604.4 484 60.7
HPP92_004639 Vanilla planifolia HOM05D004862 ORTHO05D005841 1.9e-170 603.2 373 74.3
HPP92_004630 Vanilla planifolia HOM05D004862 ORTHO05D005841 3.5e-169 599.0 373 74.0
CBR_g37214 Chara braunii HOM05D004862 ORTHO05D005841 7.4e-167 591.3 530 55.8
Atru.chr6.1121 Acer truncatum HOM05D004862 ORTHO05D005841 7.9e-161 571.2 359 75.2
TPR.G31479 Trifolium pratense HOM05D004862 ORTHO05D005841 2.0e-156 556.6 342 75.1
TAR628G0283 Trochodendron aralioides HOM05D004862 ORTHO05D005841 1.7e-155 553.5 327 80.7
FAN05G4337 Fragaria x ananassa HOM05D004862 ORTHO05D005841 6.9e-149 531.6 327 75.8
Cpa.g.sc845.1 Carica papaya HOM05D004862 ORTHO05D005841 6.5e-147 525.0 327 77.1
C02p53050 Brassica napus HOM05D004862 ORTHO05D005841 1.4e-144 517.3 319 78.1
BolC2t11366H Brassica oleracea HOM05D004862 ORTHO05D005841 1.8e-144 516.9 333 75.7
Zm00001eb243830 Zea mays HOM05D004862 ORTHO05D005841 2.0e-143 513.5 328 75.3
BcaC03g17340 Brassica carinata HOM05D004862 ORTHO05D005841 5.7e-143 511.9 359 70.2
SEGI_00112 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 5.2e-136 488.8 351 68.9
CsaV3_7G014980 Cucumis sativus L. HOM05D004862 ORTHO05D005841 4.8e-134 482.3 296 76.4
C02p52870 Brassica napus HOM05D004862 ORTHO05D005841 2.1e-129 466.8 327 71.6
MCO05G740 Micromonas commoda HOM05D004862 ORTHO05D005841 3.4e-103 379.8 444 44.8
CsaV3_UNG189490 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.4e-101 374.4 222 77.5
Cre08.g359100 Chlamydomonas reinhardtii HOM05D004862 ORTHO05D005841 2.0e-100 370.5 398 48.5
PRCOL_00003583 Prasinoderma coloniale HOM05D004862 ORTHO05D005841 1.4e-96 357.8 428 45.6
unitig_26.g9584 Utricularia gibba HOM05D004862 ORTHO05D005841 3.0e-91 340.1 227 69.2
Ca_29817_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 2.8e-89 333.6 211 76.8
Ca_25384_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 6.0e-76 289.3 187 75.9
CsaV3_7G015000 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.1e-74 285.0 159 83.6
CsaV3_UNG187480 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.1e-74 285.0 159 83.6
CsaV3_7G014960 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.3e-72 276.2 159 82.4
unitig_26.g9585 Utricularia gibba HOM05D004862 ORTHO05D005841 1.6e-68 264.6 145 82.1
Cfa021801 Carpinus fangiana HOM05D004862 ORTHO05D005841 9.6e-58 228.8 413 35.1
AagrBONN_evm.TU.Sc2ySwM_344.4621 Anthoceros agrestis HOM05D004862 ORTHO05D005841 3.6e-44 183.7 137 63.5
CsaV3_UNG197500 Cucumis sativus L. HOM05D004862 ORTHO05D005841 4.6e-44 183.3 106 81.1
Ca_31280_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 3.0e-43 180.6 106 77.4
CsaV3_7G014970 Cucumis sativus L. HOM05D004862 ORTHO05D005841 3.1e-40 170.6 94 87.2
CsaV3_7G015010 Cucumis sativus L. HOM05D004862 ORTHO05D005841 9.0e-40 169.1 93 87.1
BolC2t11379H Brassica oleracea HOM05D004862 ORTHO05D005841 2.6e-34 151.0 119 63.9
Potri.003G022650 Populus trichocarpa HOM05D004862 ORTHO05D005841 7.7e-31 139.4 91 68.1
Actinidia00239 Actinidia chinensis HOM05D004862 ORTHO05D005841 7.2e-21 106.3 87 58.6
TAR628G0087 Trochodendron aralioides HOM05D004862 ORTHO05D005841 4.0e-19 100.5 67 67.2
CsaV3_7G014950 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.7e-18 96.7 65 61.5
Potri.003G022701 Populus trichocarpa HOM05D004862 ORTHO05D005841 8.2e-17 92.8 76 61.8
Cfa010153 Carpinus fangiana HOM05D004862 ORTHO05D005841 7.0e-16 89.7 70 62.9
unitig_26.g9586 Utricularia gibba HOM05D004862 ORTHO05D005841 1.4e-11 75.5 69 58.0
Dinv28090 Davidia involucrata HOM05D000259 ORTHO05D000155 1.6e-07 62.0 34 76.5
MCO05G371 Micromonas commoda HOM05D004862 ORTHO05D267887 2.0e-07 61.6 121 37.2


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