Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc09g0002060 Simmondsia chinensis HOM05D009348 ORTHO05D010856 0.0e+00 1334.7 698 100.0
Sc24g0004230 Simmondsia chinensis HOM05D009348 ORTHO05D010856 7.9e-164 581.6 637 55.4
Sc22g0001820 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.2e-31 142.5 228 40.4
Sc03g0005750 Simmondsia chinensis HOM05D009348 ORTHO05D011705 7.2e-24 116.7 135 51.9
Sc02g0003510 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.0e-22 112.8 329 28.3
Sc14g0002620 Simmondsia chinensis HOM05D009209 ORTHO05D011705 5.1e-22 110.5 238 35.3
Sc13g0006580 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.4e-16 92.4 98 43.9
Sc01g0004870 Simmondsia chinensis HOM05D009209 ORTHO05D009629 1.2e-15 89.4 62 69.4
Sc07g0000050 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.6e-15 89.0 84 47.6
Sc07g0002530 Simmondsia chinensis HOM05D011136 ORTHO05D010856 4.6e-15 87.4 164 31.7
Sc11g0003480 Simmondsia chinensis HOM05D010674 ORTHO05D012685 2.6e-13 81.6 130 40.0
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 4.4e-13 80.9 353 25.8
Sc06g0002140 Simmondsia chinensis HOM05D009348 ORTHO05D010856 5.7e-13 80.5 178 35.4
Sc02g0007120 Simmondsia chinensis HOM05D011136 ORTHO05D010856 1.3e-12 79.3 123 34.1
Sc04g0004290 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.7e-12 79.0 100 36.0
Sc10g0009390 Simmondsia chinensis HOM05D011136 ORTHO05D010856 1.4e-11 75.9 135 28.1
Sc10g0002300 Simmondsia chinensis HOM05D009348 ORTHO05D010856 3.1e-11 74.7 130 40.0
Sc08g0006410 Simmondsia chinensis HOM05D011136 ORTHO05D010856 2.0e-10 72.0 98 30.6
Sc12g0005620 Simmondsia chinensis HOM05D009348 ORTHO05D010856 2.6e-10 71.6 72 45.8
Sc25g0000230 Simmondsia chinensis HOM05D011136 ORTHO05D010856 2.6e-10 71.6 118 35.6
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 4.5e-10 70.9 357 24.6
Sc06g0001740 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.0e-09 69.7 194 29.4
Sc08g0006400 Simmondsia chinensis HOM05D011136 ORTHO05D010856 8.5e-09 66.6 231 27.3
Sc14g0007840 Simmondsia chinensis HOM05D011136 ORTHO05D010856 1.4e-08 65.9 191 30.4
Sc15g0002620 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.4e-08 65.9 38 81.6
Sc22g0002690 Simmondsia chinensis HOM05D000043 ORTHO05D030613 1.4e-08 65.9 174 32.2
Sc14g0003540 Simmondsia chinensis HOM05D009209 ORTHO05D011057 1.9e-08 65.5 101 34.7
Sc01g0000330 Simmondsia chinensis HOM05D009348 ORTHO05D010856 7.2e-08 63.5 113 38.1
Actinidia04023 Actinidia chinensis HOM05D012898 ORTHO05D011057 9.4e-08 63.2 98 40.8
Sc16g0005360 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.4e-08 63.2 105 38.1
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 1.2e-07 62.8 230 25.7
Sc21g0002000 Simmondsia chinensis HOM05D011136 ORTHO05D010856 2.1e-07 62.0 146 32.2
Sc18g0000360 Simmondsia chinensis HOM05D009348 ORTHO05D030613 3.6e-07 61.2 114 36.8
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.7e-07 60.8 82 41.5
vmacro12740 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 4.7e-07 60.8 114 36.0
Ah.16g108500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 6.1e-07 60.5 96 37.5
Ah.11g040120 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.0e-06 59.7 87 39.1
Sc07g0006130 Simmondsia chinensis HOM05D009209 ORTHO05D009629 1.4e-06 59.3 124 31.5
Ah.02g117550 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.8e-06 58.9 239 23.0
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 1.8e-06 58.9 85 40.0
Ah.15g100500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.0e-06 58.2 88 37.5
Ah.08g219520 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.9e-06 57.8 84 41.7
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 5.2e-06 57.4 218 24.8
Ah.07g201540 Amaranthus hybridus HOM05D008762 ORTHO05D011252 8.8e-06 56.6 89 38.2
Sc10g0010640 Simmondsia chinensis HOM05D011136 ORTHO05D010856 8.8e-06 56.6 178 27.0


User provided reference genes

Program Settings