Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 1.8e-170 602.4 293 100.0
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 1.3e-104 383.6 291 66.3
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 9.4e-103 377.5 291 66.3
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 2.0e-97 359.8 287 61.7
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 8.3e-91 337.8 286 60.8
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 1.1e-90 337.4 286 60.8
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 9.2e-90 334.3 298 56.7
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 5.9e-89 331.6 279 62.4
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 1.3e-88 330.5 272 59.2
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 2.3e-88 329.7 267 61.0
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 2.5e-87 326.2 272 58.8
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 7.3e-87 324.7 293 53.9
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 1.2e-86 323.9 267 59.6
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 2.1e-86 323.2 270 58.9
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 2.8e-86 322.8 293 56.0
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 4.0e-85 318.9 271 58.7
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 1.2e-84 317.4 269 58.7
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 1.2e-84 317.4 271 58.3
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 9.8e-84 314.3 269 59.9
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 2.2e-83 313.2 289 54.3
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 2.2e-83 313.2 268 58.6
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 8.3e-83 311.2 283 56.5
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 8.3e-83 311.2 289 55.4
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 8.3e-83 311.2 273 55.7
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 1.1e-82 310.8 269 56.9
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 1.9e-82 310.1 270 56.7
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.9e-82 310.1 265 58.5
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 1.9e-82 310.1 276 56.2
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 2.4e-82 309.7 281 53.4
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 3.2e-82 309.3 266 57.5
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 3.2e-82 309.3 268 55.2
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 4.1e-82 308.9 264 57.6
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 4.1e-82 308.9 293 53.2
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 5.4e-82 308.5 276 55.8
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 7.0e-82 308.1 274 56.9
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 7.0e-82 308.1 275 56.0
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 7.0e-82 308.1 277 56.7
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 7.0e-82 308.1 287 53.3
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 9.2e-82 307.8 266 57.1
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 9.2e-82 307.8 264 57.6
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 9.2e-82 307.8 277 56.7
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 1.2e-81 307.4 285 53.3
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 1.2e-81 307.4 267 57.7
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 2.0e-81 306.6 263 57.0
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 4.6e-81 305.4 292 54.5
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 6.0e-81 305.1 296 53.4
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 1.7e-80 303.5 271 56.1
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 2.3e-80 303.1 293 52.9
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 3.0e-80 302.8 254 59.8
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 6.6e-80 301.6 293 52.6
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 6.6e-80 301.6 282 53.9
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 6.6e-80 301.6 276 54.7
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 8.6e-80 301.2 270 54.4
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 8.6e-80 301.2 285 53.0
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 1.1e-79 300.8 262 58.0
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 1.1e-79 300.8 262 58.0
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.1e-79 300.8 275 53.1
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 1.1e-79 300.8 261 56.7
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 5.6e-79 298.5 278 55.0
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 7.3e-79 298.1 268 55.6
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 1.6e-78 297.0 261 57.5
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 1.6e-78 297.0 261 57.5
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 1.6e-78 297.0 267 53.9
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 1.6e-78 297.0 280 54.6
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 2.8e-78 296.2 261 56.3
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 3.6e-78 295.8 283 52.3
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 3.6e-78 295.8 265 56.2
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 1.4e-77 293.9 264 52.3
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 1.4e-77 293.9 282 53.5
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 1.8e-77 293.5 261 57.1
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 2.3e-77 293.1 276 53.6
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 3.1e-77 292.7 289 51.9
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 3.1e-77 292.7 280 53.6
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 1.2e-76 290.8 266 56.0
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 1.5e-76 290.4 278 53.2
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 2.0e-76 290.0 281 53.0
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 4.4e-76 288.9 266 55.6
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 5.8e-76 288.5 291 50.9
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 3.7e-75 285.8 253 56.5
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 4.9e-75 285.4 267 55.4
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 4.9e-75 285.4 284 53.2
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 4.9e-75 285.4 267 55.4
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 6.4e-75 285.0 286 50.3
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 8.3e-75 284.6 273 54.2
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 8.3e-75 284.6 253 55.7
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 1.9e-74 283.5 293 51.5
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 2.7e-73 279.6 244 55.7
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 3.5e-73 279.3 287 50.9
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 3.5e-73 279.3 244 57.8
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 4.3e-71 272.3 239 55.2
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 9.5e-71 271.2 313 45.0
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 6.2e-70 268.5 272 52.2
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 5.2e-69 265.4 303 46.2
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 2.0e-68 263.5 269 49.1
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 5.8e-68 261.9 256 51.6
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 2.2e-67 260.0 247 49.8
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 3.7e-67 259.2 298 49.3
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 6.4e-67 258.5 271 50.6
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 1.2e-65 254.2 213 58.2
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 1.6e-65 253.8 268 47.0
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 3.0e-64 249.6 223 57.8
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 2.1e-62 243.4 344 40.4
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 4.7e-62 242.3 257 49.0
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 1.4e-61 240.7 328 39.9
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 2.4e-61 240.0 281 44.8
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 6.8e-61 238.4 275 44.0
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 2.0e-60 236.9 293 47.1
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 9.2e-58 228.0 218 53.7
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 6.0e-57 225.3 192 57.8
CSS0049746 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 1.9e-50 203.8 200 52.0
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 9.3e-50 201.4 219 48.9
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 9.3e-50 201.4 219 48.9
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.6e-49 200.7 277 40.8
ATR0315G075 Amborella trichopoda HOM05D004971 ORTHO05D006289 1.3e-48 197.6 209 49.8
Pp3c17_15270 Physcomitrium patens HOM05D004971 ORTHO05D006289 3.9e-48 196.1 288 36.5
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.5e-47 194.1 219 47.0
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.9e-47 193.7 219 47.0
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 8.1e-46 188.3 218 45.9
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 1.2e-44 184.5 191 48.7
MD02G1058100 Malus domestica HOM05D004971 ORTHO05D006289 8.4e-43 178.3 249 38.2
EL10Ac8g18422 Beta vulgaris HOM05D004971 ORTHO05D006289 2.3e-40 170.2 141 62.4
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 1.5e-39 167.5 433 30.0
CDE05G3470 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 2.6e-36 156.8 124 58.9
MCO09G154 Micromonas commoda HOM05D004971 ORTHO05D006289 2.9e-35 153.3 312 32.4
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 7.9e-33 145.2 184 49.5
PRCOL_00000240 Prasinoderma coloniale HOM05D004971 ORTHO05D006289 1.0e-32 144.8 320 32.5
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 3.4e-28 129.8 193 42.5
Haze_02526 Corylus avellana HOM05D004971 ORTHO05D006289 7.6e-28 128.6 181 45.9
MBI04_g02609_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D000022 2.9e-27 126.7 141 48.2
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 5.0e-27 125.9 382 27.2
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 3.0e-24 116.7 155 43.2
Lj4g0009518 Lotus japonicus HOM05D004971 ORTHO05D006289 1.1e-23 114.8 87 58.6
Haze_02523 Corylus avellana HOM05D004971 ORTHO05D006289 1.5e-23 114.4 170 43.5
CSS0032398 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 9.7e-23 111.7 82 65.9
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 1.5e-20 104.4 154 40.3
Lalb_Chr24g0397371 Lupinus albus HOM05D004971 ORTHO05D006289 5.9e-20 102.4 140 44.3
Cpa.g.sc40.24 Carica papaya HOM05D004971 ORTHO05D006289 5.0e-19 99.4 53 75.5
Nitab4.5_0002165g0090 Nicotiana tabacum HOM05D004971 ORTHO05D006289 9.4e-18 95.1 51 72.5
MBI19_g42779_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 2.5e-15 87.0 169 35.5
Actinidia07401 Actinidia chinensis HOM05D004971 ORTHO05D006289 5.7e-15 85.9 56 67.9
MBI19_g24589_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 1.0e-11 75.1 195 29.7
Nitab4.5_0001706g0070 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.3e-11 74.7 63 57.1
Nitab4.5_0001706g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.5e-07 61.2 30 83.3
CiPaw.05G218700 Carya illinoinensis HOM05D004971 ORTHO05D006289 7.4e-07 58.9 33 72.7
FvH4_7g02480 Fragaria vesca HOM05D004971 ORTHO05D022553 9.7e-07 58.5 38 63.2
FvH4_7g02600 Fragaria vesca HOM05D004971 ORTHO05D022553 9.7e-07 58.5 38 63.2
MBI19_g24592_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 2.8e-06 57.0 38 57.9


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