Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc08g0007740 Simmondsia chinensis HOM05D007452 ORTHO05D009375 1.1e-69 266.5 140 100.0
AUR62021449 Chenopodium quinoa HOM05D007452 ORTHO05D009375 2.7e-39 165.6 139 66.9
Haze_25788 Corylus avellana HOM05D007452 ORTHO05D009375 8.7e-38 160.6 136 61.8
Ah.09g230860 Amaranthus hybridus HOM05D007452 ORTHO05D009375 1.9e-37 159.5 139 63.3
PGR102G0901 Punica granatum HOM05D007452 ORTHO05D009375 2.8e-36 155.6 135 61.5
COL.COLO4_34802 Corchorus olitorius HOM05D007452 ORTHO05D009375 4.8e-36 154.8 134 60.4
Thecc.09G105200 Theobroma cacao HOM05D007452 ORTHO05D009375 4.8e-36 154.8 133 62.4
BcaC03g13689 Brassica carinata HOM05D007452 ORTHO05D009375 1.1e-35 153.7 133 61.7
BNapus_Darmor_BZH_scaffold_38p02290 Brassica napus HOM05D007452 ORTHO05D009375 1.1e-35 153.7 133 61.7
Cc06_g10100 Coffea canephora HOM05D007452 ORTHO05D009375 1.4e-35 153.3 135 61.5
AT5G19570 Arabidopsis thaliana HOM05D007452 ORTHO05D009375 1.8e-35 152.9 136 60.3
CARHR193330 Cardamine hirsuta HOM05D007452 ORTHO05D009375 2.4e-35 152.5 137 58.4
TWI34G0936 Tripterygium wilfordii HOM05D007452 ORTHO05D009375 2.4e-35 152.5 133 57.9
vmacro06236 Vaccinium macrocarpon HOM05D007452 ORTHO05D009375 2.4e-35 152.5 136 61.8
Gohir.D06G063500 Gossypium hirsutum HOM05D007452 ORTHO05D009375 6.9e-35 151.0 133 60.2
Ciclev10009852m.g Citrus clementina HOM05D007452 ORTHO05D009375 1.2e-34 150.2 134 60.4
MD15G1192300 Malus domestica HOM05D007452 ORTHO05D009375 1.2e-34 150.2 133 57.9
A02p05660 Brassica napus HOM05D007452 ORTHO05D009375 2.0e-34 149.4 138 58.7
Nn2g11650 Nelumbo nucifera HOM05D007452 ORTHO05D009375 3.4e-34 148.7 138 58.7
GSVIVG01015344001 Vitis vinifera HOM05D007452 ORTHO05D009375 4.5e-34 148.3 135 59.3
PGSC0003DMG400023982 Solanum tuberosum HOM05D007452 ORTHO05D009375 5.8e-34 147.9 136 60.3
BraA02t05518Z Brassica rapa HOM05D007452 ORTHO05D009375 9.9e-34 147.1 137 58.4
PSO210G5570 Papaver somniferum HOM05D007452 ORTHO05D009375 9.9e-34 147.1 135 59.3
AL6G31080 Arabidopsis lyrata HOM05D007452 ORTHO05D009375 1.3e-33 146.7 136 56.6
Nitab4.5_0002165g0070 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.3e-33 146.7 136 59.6
Nitab4.5_0003331g0020 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.7e-33 146.4 135 59.3
MD02G1057900 Malus domestica HOM05D007452 ORTHO05D009375 2.2e-33 146.0 134 56.0
QL02p043240 Quercus lobata HOM05D007452 ORTHO05D009375 2.9e-33 145.6 132 58.3
QL02p044487 Quercus lobata HOM05D007452 ORTHO05D009375 2.9e-33 145.6 132 58.3
BcaB05g23392 Brassica carinata HOM05D007452 ORTHO05D009375 4.9e-33 144.8 137 58.4
Cfa003221 Carpinus fangiana HOM05D007452 ORTHO05D009375 8.4e-33 144.1 137 57.7
TAR636G3481 Trochodendron aralioides HOM05D007452 ORTHO05D009375 8.4e-33 144.1 137 56.9
Prupe.7G224900 Prunus persica HOM05D007452 ORTHO05D009375 1.1e-32 143.7 134 55.2
Nitab4.5_0000066g0140 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.9e-32 142.9 136 57.4
Thhalv10014912m.g Eutrema salsugineum HOM05D007452 ORTHO05D009375 2.4e-32 142.5 142 56.3
FAN28G0080 Fragaria x ananassa HOM05D007452 ORTHO05D009375 3.2e-32 142.1 133 54.9
CAN.G645.18 Capsicum annuum HOM05D007452 ORTHO05D009375 4.2e-32 141.7 137 59.9
FvH4_1g05720 Fragaria vesca HOM05D007452 ORTHO05D009375 4.2e-32 141.7 133 54.1
Solyc11g006870.1 Solanum lycopersicum HOM05D007452 ORTHO05D009375 4.2e-32 141.7 136 57.4
Sopen11g002770 Solanum pennellii HOM05D007452 ORTHO05D009375 4.2e-32 141.7 136 57.4
Atru.chr7.1416 Acer truncatum HOM05D007452 ORTHO05D009375 5.4e-32 141.4 139 56.1
FAN26G0145 Fragaria x ananassa HOM05D007452 ORTHO05D009375 5.4e-32 141.4 133 54.9
RcHm_v2.0_Chr2g0091331 Rosa chinensis HOM05D007452 ORTHO05D009375 5.4e-32 141.4 133 56.4
FAN26G2311 Fragaria x ananassa HOM05D007452 ORTHO05D009375 7.1e-32 141.0 133 54.1
Potri.018G084400 Populus trichocarpa HOM05D007452 ORTHO05D009375 9.3e-32 140.6 136 57.4
Sabra18G0072700 Salix brachista HOM05D007452 ORTHO05D009375 9.3e-32 140.6 134 57.5
FAN19G0597 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.1e-31 139.4 133 53.4
BolC2t06971H Brassica oleracea HOM05D007452 ORTHO05D009375 2.7e-31 139.0 118 62.7
MELO3C024705.2 Cucumis melo HOM05D007452 ORTHO05D009375 2.7e-31 139.0 133 56.4
CiPaw.04G161200 Carya illinoinensis HOM05D007452 ORTHO05D009375 3.5e-31 138.7 123 58.5
Gorai.010G074100 Gossypium raimondii HOM05D007452 ORTHO05D009375 3.5e-31 138.7 121 59.5
Dinv41642 Davidia involucrata HOM05D007452 ORTHO05D009375 4.6e-31 138.3 118 64.4
EL10Ac8g18425 Beta vulgaris HOM05D007452 ORTHO05D009375 7.9e-31 137.5 111 66.7
Duzib187G0798 Durio zibethinus HOM05D007452 ORTHO05D009375 7.9e-31 137.5 120 60.8
Sed0023851 Sechium edule HOM05D007452 ORTHO05D009375 7.9e-31 137.5 133 54.1
unitig_899.g15033 Utricularia gibba HOM05D007452 ORTHO05D009375 7.9e-31 137.5 135 54.8
HanXRQChr10g0318511 Helianthus annuus HOM05D007452 ORTHO05D009375 1.8e-30 136.3 135 57.8
THA.LOC104799068 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 1.8e-30 136.3 132 55.3
THA.LOC104808980 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 1.8e-30 136.3 132 55.3
MSTRG.19570 Avicennia marina HOM05D007452 ORTHO05D009375 3.0e-30 135.6 136 55.1
Oeu002255.1 Olea europaea HOM05D007452 ORTHO05D009375 3.0e-30 135.6 135 54.8
Carub.0006s1792 Capsella rubella HOM05D007452 ORTHO05D009375 3.9e-30 135.2 136 53.7
Lsat_1_v5_gn_5_147400 Lactuca sativa HOM05D007452 ORTHO05D009375 3.9e-30 135.2 135 57.0
Rhsim03G0239200 Rhododendron simsii HOM05D007452 ORTHO05D009375 3.9e-30 135.2 118 64.4
Eucgr.C01281 Eucalyptus grandis HOM05D007452 ORTHO05D009375 5.1e-30 134.8 126 59.5
SalBow6G2888 Salvia bowleyana HOM05D007452 ORTHO05D009375 8.7e-30 134.0 135 56.3
SGA_v2.0_scaffold10G05148 Striga asiatica HOM05D007452 ORTHO05D009375 8.7e-30 134.0 135 58.5
Aqoxy7G01521 Aquilegia oxysepala HOM05D007452 ORTHO05D009375 1.1e-29 133.7 131 58.8
Gohir.A06G065000 Gossypium hirsutum HOM05D007452 ORTHO05D009375 1.1e-29 133.7 121 57.0
DCAR_012055 Daucus carota HOM05D007452 ORTHO05D009375 2.5e-29 132.5 135 57.0
Manes.03G024500 Manihot esculenta HOM05D007452 ORTHO05D009375 3.3e-29 132.1 120 60.0
Phvul.002G311100 Phaseolus vulgaris HOM05D007452 ORTHO05D009375 3.3e-29 132.1 132 53.0
Ca_17318_v3 Cicer arietinum L. HOM05D007452 ORTHO05D009375 5.6e-29 131.3 137 51.8
Os05g0188300 Oryza sativa ssp. japonica HOM05D007452 ORTHO05D009375 5.6e-29 131.3 138 55.1
Glyma.08G035800 Glycine max HOM05D007452 ORTHO05D009375 1.3e-28 130.2 135 53.3
ATR0315G055 Amborella trichopoda HOM05D007452 ORTHO05D009375 2.1e-28 129.4 130 56.9
HPP92_008140 Vanilla planifolia HOM05D007452 ORTHO05D009375 2.1e-28 129.4 135 54.8
Migut.J01126 Erythranthe guttata HOM05D007452 ORTHO05D009375 3.6e-28 128.6 135 53.3
Aa31LG5G13720 Aethionema arabicum HOM05D007452 ORTHO05D009375 8.1e-28 127.5 115 58.3
Zm00001eb089090 Zea mays HOM05D007452 ORTHO05D009375 8.1e-28 127.5 137 54.7
Medtr8g102920 Medicago truncatula HOM05D007452 ORTHO05D009375 2.4e-27 125.9 132 50.0
Lalb_Chr05g0223071 Lupinus albus HOM05D007452 ORTHO05D009375 5.3e-27 124.8 121 55.4
Peaxi162Scf00539g00066 Petunia axillaris HOM05D007452 ORTHO05D009375 6.9e-27 124.4 116 57.8
Psat7g014560 Pisum sativum HOM05D007452 ORTHO05D009375 6.9e-27 124.4 137 48.9
ClCG06G008870 Citrullus lanatus HOM05D007452 ORTHO05D009375 1.2e-26 123.6 117 55.6
MBI04_g14927_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 3.4e-26 122.1 116 55.2
Glyma.05G228800 Glycine max HOM05D007452 ORTHO05D009375 1.1e-24 117.1 134 51.5
CDE02G1573 Ceratophyllum demersum HOM05D007452 ORTHO05D009375 3.2e-24 115.5 133 48.9
CiPaw.08G085300 Carya illinoinensis HOM05D007452 ORTHO05D009375 5.5e-24 114.8 129 49.6
SEGI_20837 Sequoiadendron giganteum HOM05D007452 ORTHO05D009375 1.3e-22 110.2 135 45.9
Sopen08g027980 Solanum pennellii HOM05D007452 ORTHO05D009375 1.3e-22 110.2 132 51.5
SMO119G0523 Selaginella moellendorffii HOM05D007452 ORTHO05D009375 5.1e-22 108.2 128 46.1
HanXRQChr03g0087651 Helianthus annuus HOM05D007452 ORTHO05D009375 1.9e-21 106.3 124 50.8
Cfa001992 Carpinus fangiana HOM05D007452 ORTHO05D009375 1.3e-20 103.6 97 58.8
CsaV3_1G020810 Cucumis sativus L. HOM05D007452 ORTHO05D009375 2.1e-20 102.8 101 53.5
CSS0004194 Camellia sinensis var. sinensis HOM05D007452 ORTHO05D009375 1.1e-16 90.5 126 46.8
Mapoly0005s0019 Marchantia polymorpha HOM05D007452 ORTHO05D009375 1.9e-16 89.7 131 40.5
Pp3c5_13600 Physcomitrium patens HOM05D007452 ORTHO05D009375 2.5e-16 89.4 131 44.3
AagrBONN_evm.TU.Sc2ySwM_117.3226 Anthoceros agrestis HOM05D007452 ORTHO05D009375 1.2e-15 87.0 131 38.9
HanXRQChr02g0047631 Helianthus annuus HOM05D007452 ORTHO05D009375 1.2e-15 87.0 88 56.8
MBI12_g37480_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 2.7e-07 59.3 50 62.0


User provided reference genes

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