Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc08g0007700 Simmondsia chinensis HOM05D003644 ORTHO05D004305 6.7e-68 260.8 153 100.0
GSVIVG01015346001 Vitis vinifera HOM05D003644 ORTHO05D004305 1.5e-14 83.6 162 38.3
Manes.16G112500 Manihot esculenta HOM05D003644 ORTHO05D004305 1.6e-13 80.1 158 39.9
CiPaw.03G227900 Carya illinoinensis HOM05D003644 ORTHO05D004305 2.8e-13 79.3 164 36.0
PGSC0003DMG400003139 Solanum tuberosum HOM05D003644 ORTHO05D004305 2.8e-13 79.3 140 40.0
COL.COLO4_34805 Corchorus olitorius HOM05D003644 ORTHO05D004305 3.6e-13 79.0 132 44.7
Haze_25785 Corylus avellana HOM05D003644 ORTHO05D004305 1.1e-12 77.4 165 37.0
TAR624G1421 Trochodendron aralioides HOM05D003644 ORTHO05D004305 3.1e-12 75.9 152 36.2
Thecc.09G105500 Theobroma cacao HOM05D003644 ORTHO05D004305 4.0e-12 75.5 163 36.8
Duzib187G1156 Durio zibethinus HOM05D003644 ORTHO05D004305 1.5e-11 73.6 163 35.0
Sopen07g007520 Solanum pennellii HOM05D003644 ORTHO05D004305 4.4e-11 72.0 139 40.3
PGSC0003DMG400000374 Solanum tuberosum HOM05D003644 ORTHO05D004305 4.4e-11 72.0 157 36.3
VMungo0251G1747 Vigna mungo HOM05D003644 ORTHO05D004305 4.4e-11 72.0 162 32.7
Gorai.010G073900 Gossypium raimondii HOM05D003644 ORTHO05D004305 5.8e-11 71.6 151 39.1
AUR62010940 Chenopodium quinoa HOM05D003644 ORTHO05D004305 7.6e-11 71.2 163 35.6
Manes.03G024200 Manihot esculenta HOM05D003644 ORTHO05D004305 7.6e-11 71.2 165 35.8
Peaxi162Scf00231g00061 Petunia axillaris HOM05D003644 ORTHO05D004305 7.6e-11 71.2 158 39.2
Sopen12g003210 Solanum pennellii HOM05D003644 ORTHO05D004305 7.6e-11 71.2 157 35.7
HanXRQChr12g0358181 Helianthus annuus HOM05D003644 ORTHO05D004305 1.3e-10 70.5 120 40.8
Ciclev10010512m.g Citrus clementina HOM05D003644 ORTHO05D004305 1.7e-10 70.1 167 35.3
QL02p044635 Quercus lobata HOM05D003644 ORTHO05D004305 1.7e-10 70.1 166 35.5
Hund09226 Selenicereus undatus HOM05D003644 ORTHO05D004305 1.7e-10 70.1 186 34.9
Gohir.D06G063400 Gossypium hirsutum HOM05D003644 ORTHO05D004305 4.9e-10 68.6 150 38.0
Sc18g0001380 Simmondsia chinensis HOM05D003644 ORTHO05D004305 8.4e-10 67.8 148 35.8
Oeu015581.1 Olea europaea HOM05D003644 ORTHO05D004305 1.1e-09 67.4 158 35.4
Potri.006G161100 Populus trichocarpa HOM05D003644 ORTHO05D004305 1.1e-09 67.4 153 37.9
Glyma.01G145600 Glycine max HOM05D003644 ORTHO05D004305 1.9e-09 66.6 157 32.5
Peaxi162Scf00665g00003 Petunia axillaris HOM05D003644 ORTHO05D004305 1.9e-09 66.6 157 36.3
Phvul.002G311400 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 1.9e-09 66.6 163 33.1
THA.LOC104804017 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 2.4e-09 66.2 149 32.9
Glyma.09G193400 Glycine max HOM05D003644 ORTHO05D004305 3.2e-09 65.9 149 32.2
Gohir.A07G004600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 3.2e-09 65.9 158 34.2
CSS0008241 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 5.4e-09 65.1 166 37.3
Gorai.001G007300 Gossypium raimondii HOM05D003644 ORTHO05D004305 5.4e-09 65.1 158 34.2
CSS0010496 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 7.1e-09 64.7 164 33.5
CSS0033414 Camellia sinensis var. sinensis HOM05D003644 ORTHO05D004305 7.1e-09 64.7 164 33.5
Hund09225 Selenicereus undatus HOM05D003644 ORTHO05D004305 7.1e-09 64.7 166 33.1
CAN.G1774.6 Capsicum annuum HOM05D003644 ORTHO05D004305 9.2e-09 64.3 158 34.8
DCAR_010477 Daucus carota HOM05D003644 ORTHO05D004305 1.2e-08 63.9 133 37.6
Duzib150G1566 Durio zibethinus HOM05D003644 ORTHO05D004305 1.6e-08 63.5 159 34.6
Phvul.004G168350 Phaseolus vulgaris HOM05D003644 ORTHO05D004305 1.6e-08 63.5 152 32.9
THA.LOC104814562 Tarenaya hassleriana HOM05D003644 ORTHO05D004305 1.6e-08 63.5 164 29.9
VMungo0464G0020 Vigna mungo HOM05D003644 ORTHO05D004305 1.6e-08 63.5 153 30.7
Nn3g18137 Nelumbo nucifera HOM05D003644 ORTHO05D004305 2.7e-08 62.8 166 33.7
Duzib168G0231 Durio zibethinus HOM05D003644 ORTHO05D004305 3.5e-08 62.4 161 34.2
TWI32G0193 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 3.5e-08 62.4 158 32.9
Cpa.g.sc23.57 Carica papaya HOM05D003644 ORTHO05D004305 6.0e-08 61.6 159 35.8
Glyma.05G229100 Glycine max HOM05D003644 ORTHO05D004305 6.0e-08 61.6 155 30.3
CANSAT56G0200 Cannabis sativa HOM05D003644 ORTHO05D004305 7.8e-08 61.2 176 33.0
ClCG06G008860 Citrullus lanatus HOM05D003644 ORTHO05D004305 7.8e-08 61.2 161 36.6
ClCG11G002330 Citrullus lanatus HOM05D003644 ORTHO05D004305 7.8e-08 61.2 158 34.2
Gohir.A05G025200 Gossypium hirsutum HOM05D003644 ORTHO05D004305 7.8e-08 61.2 159 34.6
Medtr6g088280 Medicago truncatula HOM05D003644 ORTHO05D004305 7.8e-08 61.2 155 31.6
Actinidia20403 Actinidia chinensis HOM05D003644 ORTHO05D004305 1.0e-07 60.8 144 33.3
TAR636G2793 Trochodendron aralioides HOM05D003644 ORTHO05D004305 1.3e-07 60.5 161 32.9
MSTRG.6013 Avicennia marina HOM05D003644 ORTHO05D004305 1.7e-07 60.1 166 33.1
Gohir.D07G007600 Gossypium hirsutum HOM05D003644 ORTHO05D004305 1.7e-07 60.1 156 35.3
EL10Ac8g18428 Beta vulgaris HOM05D003644 ORTHO05D004305 2.3e-07 59.7 158 33.5
COL.COLO4_17464 Corchorus olitorius HOM05D003644 ORTHO05D004305 2.3e-07 59.7 104 39.4
Nn2g11654 Nelumbo nucifera HOM05D003644 ORTHO05D004305 2.3e-07 59.7 168 33.9
SalBow6G0047 Salvia bowleyana HOM05D003644 ORTHO05D004305 2.3e-07 59.7 163 31.9
TWI34G1832 Tripterygium wilfordii HOM05D003644 ORTHO05D004305 2.3e-07 59.7 170 30.0
MBI04_g14930_MAGBIO Magnolia biondii HOM05D003644 ORTHO05D004305 3.0e-07 59.3 158 30.4
Potri.018G084100 Populus trichocarpa HOM05D003644 ORTHO05D004305 3.0e-07 59.3 164 32.3
Hma1.2p1_0945F.1_g240090 Hydrangea macrophylla HOM05D003644 ORTHO05D004305 3.9e-07 58.9 143 36.4
HanXRQChr14g0449921 Helianthus annuus HOM05D003644 ORTHO05D004305 5.1e-07 58.5 120 40.8
arahy.Tifrunner.gnm1.ann1.XM0XDL Arachis hypogaea HOM05D003644 ORTHO05D004305 6.6e-07 58.2 176 33.0
Cc06_g10070 Coffea canephora HOM05D003644 ORTHO05D004305 8.6e-07 57.8 162 37.0
Gohir.A06G064800 Gossypium hirsutum HOM05D003644 ORTHO05D004305 8.6e-07 57.8 160 35.6
Actinidia32668 Actinidia chinensis HOM05D003644 ORTHO05D004305 1.1e-06 57.4 87 46.0
Sed0019018 Sechium edule HOM05D003644 ORTHO05D004305 1.1e-06 57.4 89 40.4
TPR.G34913 Trifolium pratense HOM05D003644 ORTHO05D004305 1.1e-06 57.4 165 30.3
Lalb_Chr22g0352641 Lupinus albus HOM05D003644 ORTHO05D004305 1.5e-06 57.0 165 31.5
Psat1g044920 Pisum sativum HOM05D003644 ORTHO05D004305 1.9e-06 56.6 154 31.2
CsaV3_2G002110 Cucumis sativus L. HOM05D003644 ORTHO05D004305 2.5e-06 56.2 162 32.7
Eucgr.C01280 Eucalyptus grandis HOM05D003644 ORTHO05D004305 2.5e-06 56.2 135 37.0
Gohir.D05G026700 Gossypium hirsutum HOM05D003644 ORTHO05D004305 2.5e-06 56.2 162 33.3
Dinv41640 Davidia involucrata HOM05D003644 ORTHO05D004305 3.3e-06 55.8 112 37.5
Sed0013314 Sechium edule HOM05D003644 ORTHO05D004305 3.3e-06 55.8 161 34.8
AT2G20080 Arabidopsis thaliana HOM05D003644 ORTHO05D004305 4.3e-06 55.5 111 39.6
Glyma.08G036100 Glycine max HOM05D003644 ORTHO05D004305 4.3e-06 55.5 152 30.3
PSO782G2161 Papaver somniferum HOM05D003644 ORTHO05D004305 4.3e-06 55.5 160 28.8
PGR102G0050 Punica granatum HOM05D003644 ORTHO05D004305 4.3e-06 55.5 165 33.9
arahy.Tifrunner.gnm1.ann1.TDG8V6 Arachis hypogaea HOM05D003644 ORTHO05D004305 5.6e-06 55.1 178 30.9
MELO3C004570.2 Cucumis melo HOM05D003644 ORTHO05D004305 7.3e-06 54.7 160 30.6
Nitab4.5_0002431g0010 Nicotiana tabacum HOM05D003644 ORTHO05D004305 7.3e-06 54.7 88 46.6
Sc08g0007690 Simmondsia chinensis HOM05D003644 ORTHO05D004305 7.3e-06 54.7 187 35.8


User provided reference genes

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