Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc08g0007460 Simmondsia chinensis HOM05D007950 ORTHO05D009951 4.2e-34 147.5 78 100.0
GSVIVG01015395001 Vitis vinifera HOM05D007950 ORTHO05D009951 2.6e-15 85.1 68 64.7
QL02p085472 Quercus lobata HOM05D007950 ORTHO05D009951 3.7e-14 81.3 68 60.3
Gohir.A06G062300 Gossypium hirsutum HOM05D007950 ORTHO05D009951 5.4e-13 77.4 68 58.8
FAN23G0617 Fragaria x ananassa HOM05D007950 ORTHO05D009951 7.0e-13 77.0 68 60.3
Gohir.D06G060600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 7.0e-13 77.0 68 57.4
Potri.001G181701 Populus trichocarpa HOM05D007950 ORTHO05D009951 7.0e-13 77.0 67 59.7
CSS0015996 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 9.2e-13 76.6 71 54.9
FvH4_1g04841 Fragaria vesca HOM05D007950 ORTHO05D009951 9.2e-13 76.6 68 60.3
FAN19G2230 Fragaria x ananassa HOM05D007950 ORTHO05D009951 9.2e-13 76.6 68 60.3
FAN26G3407 Fragaria x ananassa HOM05D007950 ORTHO05D009951 9.2e-13 76.6 68 60.3
MD15G1186200 Malus domestica HOM05D007950 ORTHO05D009951 9.2e-13 76.6 68 57.4
Eucgr.C01044 Eucalyptus grandis HOM05D007950 ORTHO05D009951 1.2e-12 76.3 71 59.2
Thecc.09G111000 Theobroma cacao HOM05D007950 ORTHO05D009951 1.2e-12 76.3 68 55.9
Actinidia20354 Actinidia chinensis HOM05D007950 ORTHO05D009951 2.0e-12 75.5 68 57.4
MD02G1047700 Malus domestica HOM05D007950 ORTHO05D009951 2.0e-12 75.5 68 57.4
Gorai.010G070600 Gossypium raimondii HOM05D007950 ORTHO05D009951 2.7e-12 75.1 68 55.9
RcHm_v2.0_Chr2g0090511 Rosa chinensis HOM05D007950 ORTHO05D009951 2.7e-12 75.1 68 57.4
vmacro20696 Vaccinium macrocarpon HOM05D007950 ORTHO05D009951 2.7e-12 75.1 68 55.9
Sc10g0007380 Simmondsia chinensis HOM05D007950 ORTHO05D009951 1.0e-11 73.2 68 54.4
TAR636G2963 Trochodendron aralioides HOM05D007950 ORTHO05D009951 1.0e-11 73.2 68 55.9
CiPaw.03G232500 Carya illinoinensis HOM05D007950 ORTHO05D009951 1.7e-11 72.4 69 53.6
Ciclev10010772m.g Citrus clementina HOM05D007950 ORTHO05D009951 2.3e-11 72.0 71 52.1
Manes.16G116501 Manihot esculenta HOM05D007950 ORTHO05D009951 2.3e-11 72.0 67 50.7
ClCG06G008510 Citrullus lanatus HOM05D007950 ORTHO05D009951 3.9e-11 71.2 70 52.9
CsaV3_1G030490 Cucumis sativus L. HOM05D007950 ORTHO05D009951 6.6e-11 70.5 68 54.4
PGR102G0372 Punica granatum HOM05D007950 ORTHO05D009951 1.9e-10 68.9 71 46.5
CSS0032282 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 4.3e-10 67.8 72 52.8
Potri.003G054001 Populus trichocarpa HOM05D007950 ORTHO05D009951 5.6e-10 67.4 64 57.8
CSS0048253 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 7.3e-10 67.0 70 54.3
TPR.G35274 Trifolium pratense HOM05D007950 ORTHO05D009951 1.2e-09 66.2 72 47.2
Nn8g39199 Nelumbo nucifera HOM05D007950 ORTHO05D009951 1.6e-09 65.9 68 50.0
Prupe.7G230500 Prunus persica HOM05D007950 ORTHO05D009951 2.8e-09 65.1 60 55.0
Thecc.06G089600 Theobroma cacao HOM05D007950 ORTHO05D009951 2.8e-09 65.1 68 54.4
Dinv36624 Davidia involucrata HOM05D007950 ORTHO05D009951 4.7e-09 64.3 57 56.1
CiPaw.04G164400 Carya illinoinensis HOM05D007950 ORTHO05D009951 1.0e-08 63.2 60 51.7
Migut.D01581 Erythranthe guttata HOM05D007950 ORTHO05D009951 1.0e-08 63.2 63 47.6
Eucgr.J02984 Eucalyptus grandis HOM05D007950 ORTHO05D009951 1.8e-08 62.4 61 55.7
Gohir.1Z049586 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.8e-08 62.4 68 51.5
CiPaw.02G150700 Carya illinoinensis HOM05D007950 ORTHO05D009951 2.3e-08 62.0 65 52.3
Gohir.D03G063400 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.3e-08 62.0 68 51.5
Gorai.002G059800 Gossypium raimondii HOM05D007950 ORTHO05D009951 2.3e-08 62.0 68 51.5
Medtr6g086645 Medicago truncatula HOM05D007950 ORTHO05D009951 3.1e-08 61.6 70 47.1
QL05p023317 Quercus lobata HOM05D007950 ORTHO05D009951 3.1e-08 61.6 68 45.6
Nn2g11757 Nelumbo nucifera HOM05D007950 ORTHO05D009951 4.0e-08 61.2 67 46.3
Gohir.D05G129500 Gossypium hirsutum HOM05D007950 ORTHO05D009951 8.9e-08 60.1 68 50.0
Psat1g042280 Pisum sativum HOM05D007950 ORTHO05D009951 1.2e-07 59.7 68 44.1
Manes.11G045700 Manihot esculenta HOM05D007950 ORTHO05D009951 1.5e-07 59.3 67 47.8
Lsat_1_v5_gn_5_103401 Lactuca sativa HOM05D007950 ORTHO05D009951 2.0e-07 58.9 68 47.1
ATR0980G014 Amborella trichopoda HOM05D007950 ORTHO05D009951 2.6e-07 58.5 68 44.1
arahy.Tifrunner.gnm1.ann1.7G47EE Arachis hypogaea HOM05D007950 ORTHO05D009951 2.6e-07 58.5 66 43.9
arahy.Tifrunner.gnm1.ann1.U6R6BR Arachis hypogaea HOM05D007950 ORTHO05D009951 2.6e-07 58.5 66 43.9
Gohir.A05G130600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.6e-07 58.5 68 48.5
Medtr4g012610 Medicago truncatula HOM05D007950 ORTHO05D009951 3.4e-07 58.2 66 45.5
Psat7g251240 Pisum sativum HOM05D007950 ORTHO05D009951 3.4e-07 58.2 66 45.5
Cc06_g09630 Coffea canephora HOM05D007950 ORTHO05D009951 4.4e-07 57.8 62 48.4
Phvul.003G020900 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 4.4e-07 57.8 68 41.2
Manes.03G020101 Manihot esculenta HOM05D007950 ORTHO05D009951 5.8e-07 57.4 67 44.8
Cc04_g03310 Coffea canephora HOM05D007950 ORTHO05D009951 3.7e-06 54.7 67 49.3
Prupe.3G070100 Prunus persica HOM05D007950 ORTHO05D009951 6.4e-06 53.9 71 46.5


User provided reference genes

Program Settings