Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 1.4e-107 392.9 189 100.0
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 2.1e-79 299.3 186 76.9
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 1.8e-78 296.2 191 77.0
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 6.8e-78 294.3 186 75.8
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 1.8e-70 269.6 189 67.2
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.8e-70 269.6 189 67.7
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 8.9e-70 267.3 189 71.4
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 1.2e-69 266.9 189 67.2
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 1.2e-69 266.9 189 68.3
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 3.4e-69 265.4 188 67.0
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 3.4e-69 265.4 189 66.7
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 2.9e-68 262.3 183 67.8
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 2.9e-68 262.3 189 67.2
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 2.4e-67 259.2 189 64.6
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 4.1e-67 258.5 189 64.6
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 4.1e-67 258.5 189 64.6
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 7.8e-66 254.2 190 65.8
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 1.7e-65 253.1 191 64.4
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 3.0e-65 252.3 188 64.4
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 3.9e-65 251.9 190 64.2
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 5.0e-65 251.5 191 64.9
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 8.6e-65 250.8 190 64.2
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 3.3e-64 248.8 189 64.0
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 3.3e-64 248.8 189 63.0
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 4.3e-64 248.4 190 63.2
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 9.5e-64 247.3 189 62.4
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 1.6e-63 246.5 190 64.7
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 1.6e-63 246.5 193 62.7
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.1e-63 246.1 189 62.4
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 2.8e-63 245.7 189 64.0
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 4.7e-63 245.0 191 63.9
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 8.0e-63 244.2 189 63.0
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 3.1e-62 242.3 190 62.1
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 3.1e-62 242.3 195 61.0
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 5.2e-62 241.5 189 61.9
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 6.8e-62 241.1 179 66.5
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 8.9e-62 240.7 190 63.2
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 8.9e-62 240.7 192 62.0
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 1.2e-61 240.4 188 62.2
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 1.2e-61 240.4 190 61.1
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 2.0e-61 239.6 190 61.6
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 2.6e-61 239.2 190 60.5
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 5.8e-61 238.0 196 60.2
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 5.8e-61 238.0 195 59.0
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 9.8e-61 237.3 189 58.2
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 1.3e-60 236.9 190 59.5
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 1.7e-60 236.5 196 60.2
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 2.9e-60 235.7 190 62.6
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 3.7e-60 235.3 190 60.5
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 4.9e-60 235.0 190 58.4
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 1.1e-59 233.8 190 58.4
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 1.1e-59 233.8 190 58.4
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 1.4e-59 233.4 190 57.9
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.9e-59 233.0 193 62.2
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 1.9e-59 233.0 192 60.4
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 2.4e-59 232.6 223 54.7
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 3.2e-59 232.3 192 62.0
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 5.4e-59 231.5 190 59.5
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 5.4e-59 231.5 192 59.4
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 1.2e-58 230.3 190 58.9
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 1.2e-58 230.3 189 59.3
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 1.6e-58 229.9 190 60.0
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 2.1e-58 229.6 190 61.1
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.1e-58 229.6 159 68.6
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 2.7e-58 229.2 174 63.8
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 3.5e-58 228.8 193 59.1
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 4.6e-58 228.4 158 68.4
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 6.0e-58 228.0 186 60.2
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 6.0e-58 228.0 190 61.1
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 6.0e-58 228.0 190 61.1
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 1.0e-57 227.3 188 61.7
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 1.0e-57 227.3 190 61.1
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 1.7e-57 226.5 188 62.2
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 1.7e-57 226.5 188 62.2
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 2.3e-57 226.1 190 60.5
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 3.0e-57 225.7 193 58.0
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 3.0e-57 225.7 190 60.0
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 5.1e-57 224.9 188 61.7
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 6.6e-57 224.6 188 61.7
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.5e-56 223.4 172 62.2
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 1.9e-56 223.0 196 56.1
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 2.5e-56 222.6 193 57.5
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 2.5e-56 222.6 183 58.5
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 3.3e-56 222.2 251 48.2
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 7.3e-56 221.1 188 58.5
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 2.8e-55 219.2 190 60.0
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 3.6e-55 218.8 190 56.3
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 1.2e-53 213.8 201 57.7
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 2.6e-53 212.6 191 57.1
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 2.6e-53 212.6 201 57.2
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 1.6e-50 203.4 133 68.4
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 2.1e-50 203.0 191 57.1
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.7e-50 202.6 140 68.6
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 3.5e-50 202.2 172 58.7
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 3.9e-49 198.7 150 62.0
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 4.3e-48 195.3 147 59.2
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 1.2e-47 193.7 141 61.0
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 6.2e-47 191.4 144 65.3
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 2.2e-44 183.0 157 56.7
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 5.6e-40 168.3 160 50.0
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 7.3e-40 167.9 190 50.0
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 4.4e-37 158.7 188 47.9
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 9.9e-37 157.5 181 46.4
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 8.7e-33 144.4 191 44.0
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 6.9e-30 134.8 86 66.3
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 9.0e-30 134.4 165 44.2
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 1.0e-25 120.9 179 36.9
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.5e-24 117.1 104 56.7
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 3.7e-23 112.5 130 38.5
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 6.2e-23 111.7 90 62.2
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.1e-22 110.9 95 60.0
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 5.8e-21 105.1 86 60.5
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 1.3e-20 104.0 86 59.3
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 3.8e-20 102.4 138 37.0
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 4.9e-20 102.1 65 72.3
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 1.8e-17 93.6 75 58.7
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 1.4e-14 84.0 51 78.4
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 1.0e-12 77.8 130 33.8
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 1.2e-10 70.9 101 45.5
Cpa.g.sc75.50 Carica papaya HOM05D006513 ORTHO05D008150 4.3e-08 62.4 49 65.3
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 4.8e-07 58.9 44 70.5


User provided reference genes

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