Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc08g0006410 Simmondsia chinensis HOM05D011136 ORTHO05D010856 3.9e-276 954.1 466 100.0
Sc10g0009390 Simmondsia chinensis HOM05D011136 ORTHO05D010856 1.5e-105 387.5 315 64.4
Sc07g0002530 Simmondsia chinensis HOM05D011136 ORTHO05D010856 2.0e-67 260.8 266 49.2
Sc10g0010640 Simmondsia chinensis HOM05D011136 ORTHO05D010856 6.0e-59 232.6 424 37.7
Sc01g0002340 Simmondsia chinensis HOM05D011136 ORTHO05D010856 1.3e-40 171.8 127 59.1
Sc25g0000230 Simmondsia chinensis HOM05D011136 ORTHO05D010856 2.0e-38 164.5 161 49.1
Sc02g0007120 Simmondsia chinensis HOM05D011136 ORTHO05D010856 8.1e-32 142.5 110 56.4
Sc02g0003510 Simmondsia chinensis HOM05D009348 ORTHO05D010856 9.0e-23 112.5 235 28.9
Sc16g0001350 Simmondsia chinensis HOM05D009348 ORTHO05D010856 3.8e-21 107.1 235 27.7
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 2.1e-19 101.3 235 27.7
Sc06g0001740 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.3e-18 98.6 200 29.0
Sc19g0004470 Simmondsia chinensis HOM05D011136 ORTHO05D010856 2.3e-18 97.8 155 33.5
Sc04g0004290 Simmondsia chinensis HOM05D009348 ORTHO05D010856 5.7e-17 93.2 159 30.8
Sc22g0001820 Simmondsia chinensis HOM05D009348 ORTHO05D010856 2.1e-16 91.3 120 35.8
Sc08g0006340 Simmondsia chinensis HOM05D027330 ORTHO05D010856 3.7e-16 90.5 127 34.6
Sc08g0006360 Simmondsia chinensis HOM05D027330 ORTHO05D010856 6.3e-16 89.7 127 34.6
arahy.Tifrunner.gnm1.ann1.2029P5 Arachis hypogaea HOM05D012808 ORTHO05D011705 1.8e-15 88.2 162 28.4
Sc02g0007350 Simmondsia chinensis HOM05D011136 ORTHO05D010856 1.1e-12 79.0 107 32.7
Sc16g0001340 Simmondsia chinensis HOM05D009348 ORTHO05D010856 2.5e-12 77.8 100 38.0
Sc09g0002060 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.0e-10 72.4 98 30.6
Sc21g0002000 Simmondsia chinensis HOM05D011136 ORTHO05D010856 2.3e-10 71.2 124 33.1
vmacro00512 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 1.1e-09 68.9 180 26.1
Sc06g0002140 Simmondsia chinensis HOM05D009348 ORTHO05D010856 7.4e-09 66.2 185 22.2
vmacro06592 Vaccinium macrocarpon HOM05D000211 ORTHO05D002285 7.4e-09 66.2 116 29.3
Sc12g0005620 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.3e-08 65.5 124 26.6
Sc22g0002380 Simmondsia chinensis HOM05D011136 ORTHO05D388282 1.3e-08 65.5 67 52.2
Sc14g0007840 Simmondsia chinensis HOM05D011136 ORTHO05D010856 1.6e-08 65.1 116 37.1
Sc13g0006580 Simmondsia chinensis HOM05D009348 ORTHO05D010856 4.8e-08 63.5 154 26.6
Ah.06g186480 Amaranthus hybridus HOM05D008762 ORTHO05D011252 6.3e-08 63.2 169 26.0
Sc03g0004340 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.1e-07 62.4 82 34.1
TPR.G18402 Trifolium pratense HOM05D002777 ORTHO05D001516 1.8e-07 61.6 217 22.1
Sc24g0004230 Simmondsia chinensis HOM05D009348 ORTHO05D010856 4.1e-07 60.5 65 44.6
vmacro22723 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 1.2e-06 58.9 132 23.5
Ah.04g161050 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.5e-06 58.5 266 21.8
Gohir.A01G136601 Gossypium hirsutum HOM05D000003 ORTHO05D015081 2.6e-06 57.8 106 28.3
Ah.15g098970 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.5e-06 57.0 182 23.6


User provided reference genes

Program Settings