Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc08g0005370 Simmondsia chinensis HOM05D005241 ORTHO05D005862 4.9e-51 204.1 100 100.0
Sc08g0005390 Simmondsia chinensis HOM05D005241 ORTHO05D005862 8.6e-40 166.8 82 100.0
Hund09015 Selenicereus undatus HOM05D005241 ORTHO05D005862 3.6e-30 134.8 83 80.7
Actinidia24021 Actinidia chinensis HOM05D005241 ORTHO05D005862 5.3e-29 131.0 79 79.7
AL8G33730 Arabidopsis lyrata HOM05D005241 ORTHO05D005862 9.0e-29 130.2 80 78.8
COL.COLO4_16080 Corchorus olitorius HOM05D005241 ORTHO05D005862 1.5e-28 129.4 79 79.7
CARHR271450 Cardamine hirsuta HOM05D005241 ORTHO05D005862 2.0e-28 129.0 80 77.5
Thhalv10013983m.g Eutrema salsugineum HOM05D005241 ORTHO05D005862 2.0e-28 129.0 80 77.5
PGR102G1178 Punica granatum HOM05D005241 ORTHO05D005862 2.0e-28 129.0 84 73.8
MSTRG.19688 Avicennia marina HOM05D005241 ORTHO05D005862 2.6e-28 128.6 79 77.2
Sp6g19390 Schrenkiella parvula HOM05D005241 ORTHO05D005862 2.6e-28 128.6 80 77.5
Duzib150G1634 Durio zibethinus HOM05D005241 ORTHO05D005862 4.4e-28 127.9 79 77.2
AT5G57700 Arabidopsis thaliana HOM05D005241 ORTHO05D005862 5.8e-28 127.5 80 76.2
CSS0029475 Camellia sinensis var. sinensis HOM05D005241 ORTHO05D005862 5.8e-28 127.5 80 77.5
Gohir.A05G345818 Gossypium hirsutum HOM05D005241 ORTHO05D005862 7.6e-28 127.1 79 77.2
Gorai.012G095700 Gossypium raimondii HOM05D005241 ORTHO05D005862 7.6e-28 127.1 79 77.2
A03p12620 Brassica napus HOM05D005241 ORTHO05D005862 9.9e-28 126.7 80 76.2
C03p14830 Brassica napus HOM05D005241 ORTHO05D005862 9.9e-28 126.7 80 76.2
BolC3t13925H Brassica oleracea HOM05D005241 ORTHO05D005862 9.9e-28 126.7 80 76.2
BraA03t10577Z Brassica rapa HOM05D005241 ORTHO05D005862 9.9e-28 126.7 80 76.2
Ciclev10008429m.g Citrus clementina HOM05D005241 ORTHO05D005862 9.9e-28 126.7 78 79.5
Dinv41292 Davidia involucrata HOM05D005241 ORTHO05D005862 9.9e-28 126.7 79 77.2
Lalb_Chr07g0180161 Lupinus albus HOM05D005241 ORTHO05D005862 1.3e-27 126.3 79 77.2
Atru.chr7.554 Acer truncatum HOM05D005241 ORTHO05D005862 2.2e-27 125.6 79 77.2
HanXRQChr06g0178861 Helianthus annuus HOM05D005241 ORTHO05D005862 2.2e-27 125.6 79 74.7
Thecc.09G163700 Theobroma cacao HOM05D005241 ORTHO05D005862 2.2e-27 125.6 79 77.2
Psat4g010840 Pisum sativum HOM05D005241 ORTHO05D005862 2.9e-27 125.2 78 76.9
Lsat_1_v5_gn_8_65460 Lactuca sativa HOM05D005241 ORTHO05D005862 3.8e-27 124.8 82 73.2
SalBow6G2881 Salvia bowleyana HOM05D005241 ORTHO05D005862 3.8e-27 124.8 82 75.6
Medtr4g129200 Medicago truncatula HOM05D005241 ORTHO05D005862 4.9e-27 124.4 79 72.2
THA.LOC104813533 Tarenaya hassleriana HOM05D005241 ORTHO05D005862 4.9e-27 124.4 79 77.2
Glyma.13G092900 Glycine max HOM05D005241 ORTHO05D005862 6.4e-27 124.0 79 75.9
MD13G1261500 Malus domestica HOM05D005241 ORTHO05D005862 6.4e-27 124.0 84 72.6
Medtr4g129180 Medicago truncatula HOM05D005241 ORTHO05D005862 6.4e-27 124.0 79 75.9
TWI34G1734 Tripterygium wilfordii HOM05D005241 ORTHO05D005862 6.4e-27 124.0 79 75.9
arahy.Tifrunner.gnm1.ann1.RWXM46 Arachis hypogaea HOM05D005241 ORTHO05D005862 8.4e-27 123.6 78 76.9
Migut.J01437 Erythranthe guttata HOM05D005241 ORTHO05D005862 8.4e-27 123.6 79 74.7
Oeu043521.1 Olea europaea HOM05D005241 ORTHO05D005862 8.4e-27 123.6 78 76.9
Os07g0516000 Oryza sativa ssp. japonica HOM05D005241 ORTHO05D005862 8.4e-27 123.6 79 73.4
TPR.G5349 Trifolium pratense HOM05D005241 ORTHO05D005862 8.4e-27 123.6 79 70.9
TAR629G1464 Trochodendron aralioides HOM05D005241 ORTHO05D005862 8.4e-27 123.6 79 74.7
CANSAT11G2449 Cannabis sativa HOM05D005241 ORTHO05D005862 1.1e-26 123.2 79 77.2
AUR62040288 Chenopodium quinoa HOM05D005241 ORTHO05D005862 1.1e-26 123.2 86 68.6
ECA236G3445 Erigeron canadensis HOM05D005241 ORTHO05D005862 1.1e-26 123.2 85 71.8
Lj4g0023001 Lotus japonicus HOM05D005241 ORTHO05D005862 1.1e-26 123.2 79 73.4
TWI34G0564 Tripterygium wilfordii HOM05D005241 ORTHO05D005862 1.1e-26 123.2 79 75.9
HPP92_026039 Vanilla planifolia HOM05D005241 ORTHO05D005862 1.1e-26 123.2 79 75.9
arahy.Tifrunner.gnm1.ann1.4YP8RP Arachis hypogaea HOM05D005241 ORTHO05D005862 1.4e-26 122.9 77 77.9
Glyma.13G092800 Glycine max HOM05D005241 ORTHO05D005862 1.4e-26 122.9 79 73.4
Gohir.D04G085700 Gossypium hirsutum HOM05D005241 ORTHO05D005862 1.4e-26 122.9 79 74.7
Manes.06G028800 Manihot esculenta HOM05D005241 ORTHO05D005862 1.4e-26 122.9 79 75.9
PSO135G0092 Papaver somniferum HOM05D005241 ORTHO05D005862 1.4e-26 122.9 79 75.9
SGA_v2.0_scaffold66G22503 Striga asiatica HOM05D005241 ORTHO05D005862 1.4e-26 122.9 79 75.9
Thecc.09G163500 Theobroma cacao HOM05D005241 ORTHO05D005862 1.4e-26 122.9 79 74.7
TPR.G5299 Trifolium pratense HOM05D005241 ORTHO05D005862 1.4e-26 122.9 78 75.6
Glyma.17G067600 Glycine max HOM05D005241 ORTHO05D005862 1.9e-26 122.5 79 75.9
Potri.018G097100 Populus trichocarpa HOM05D005241 ORTHO05D005862 1.9e-26 122.5 79 75.9
vmacro13085 Vaccinium macrocarpon HOM05D005241 ORTHO05D005862 1.9e-26 122.5 79 74.7
Ca_21190_v3 Cicer arietinum L. HOM05D005241 ORTHO05D005862 2.4e-26 122.1 79 70.9
Gohir.D06G047501 Gossypium hirsutum HOM05D005241 ORTHO05D005862 2.4e-26 122.1 79 74.7
Gorai.010G053100 Gossypium raimondii HOM05D005241 ORTHO05D005862 2.4e-26 122.1 79 74.7
Phvul.003G150000 Phaseolus vulgaris HOM05D005241 ORTHO05D005862 2.4e-26 122.1 79 75.9
unitig_0.g567 Utricularia gibba HOM05D005241 ORTHO05D005862 2.4e-26 122.1 79 74.7
DCAR_014714 Daucus carota HOM05D005241 ORTHO05D005862 3.2e-26 121.7 79 75.9
PSO384G2580 Papaver somniferum HOM05D005241 ORTHO05D005862 3.2e-26 121.7 78 75.6
Rhsim01G0009500 Rhododendron simsii HOM05D005241 ORTHO05D005862 3.2e-26 121.7 78 75.6
FAN07G2217 Fragaria x ananassa HOM05D005241 ORTHO05D005862 4.2e-26 121.3 79 74.7
FAN17G0752 Fragaria x ananassa HOM05D005241 ORTHO05D005862 4.2e-26 121.3 79 74.7
Nn7g37052 Nelumbo nucifera HOM05D005241 ORTHO05D005862 4.2e-26 121.3 79 74.7
PSO135G0726 Papaver somniferum HOM05D005241 ORTHO05D005862 4.2e-26 121.3 78 74.4
HPP92_013485 Vanilla planifolia HOM05D005241 ORTHO05D005862 4.2e-26 121.3 79 74.7
Aa31LG3G13540 Aethionema arabicum HOM05D005241 ORTHO05D005862 5.4e-26 120.9 80 71.2
Aqoxy4G03021 Aquilegia oxysepala HOM05D005241 ORTHO05D005862 5.4e-26 120.9 79 73.4
EL10Ac8g18254 Beta vulgaris HOM05D005241 ORTHO05D005862 5.4e-26 120.9 84 69.0
CDE10G0441 Ceratophyllum demersum HOM05D005241 ORTHO05D005862 5.4e-26 120.9 81 69.1
RcHm_v2.0_Chr4g0404611 Rosa chinensis HOM05D005241 ORTHO05D005862 5.4e-26 120.9 79 73.4
ATR0796G313 Amborella trichopoda HOM05D005241 ORTHO05D005862 7.1e-26 120.6 81 69.1
COL.COLO4_16078 Corchorus olitorius HOM05D005241 ORTHO05D005862 7.1e-26 120.6 74 77.0
CiPaw.07G187700 Carya illinoinensis HOM05D005241 ORTHO05D005862 9.3e-26 120.2 79 75.9
Gohir.A06G047300 Gossypium hirsutum HOM05D005241 ORTHO05D005862 9.3e-26 120.2 79 73.4
MBI18_g28946_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 9.3e-26 120.2 79 73.4
PSO135G0552 Papaver somniferum HOM05D005241 ORTHO05D005862 9.3e-26 120.2 79 73.4
Haze_22151 Corylus avellana HOM05D005241 ORTHO05D005862 1.2e-25 119.8 74 78.4
FvH4_4g09810 Fragaria vesca HOM05D005241 ORTHO05D005862 1.2e-25 119.8 79 74.7
FAN12G0682 Fragaria x ananassa HOM05D005241 ORTHO05D005862 1.2e-25 119.8 79 74.7
Os07g0516050 Oryza sativa ssp. japonica HOM05D005241 ORTHO05D005862 1.2e-25 119.8 79 72.2
SEGI_04095 Sequoiadendron giganteum HOM05D005241 ORTHO05D005862 1.2e-25 119.8 80 73.8
SEGI_10163 Sequoiadendron giganteum HOM05D005241 ORTHO05D005862 1.2e-25 119.8 80 73.8
EL10Ac7g17876 Beta vulgaris HOM05D005241 ORTHO05D005862 1.6e-25 119.4 74 74.3
AUR62039979 Chenopodium quinoa HOM05D005241 ORTHO05D005862 1.6e-25 119.4 83 71.1
VMungo1215G3242 Vigna mungo HOM05D005241 ORTHO05D005862 1.6e-25 119.4 79 70.9
ClCG06G012960 Citrullus lanatus HOM05D005241 ORTHO05D005862 2.7e-25 118.6 82 68.3
FAN22G1361 Fragaria x ananassa HOM05D005241 ORTHO05D005862 2.7e-25 118.6 79 74.7
Lalb_Chr07g0180171 Lupinus albus HOM05D005241 ORTHO05D005862 2.7e-25 118.6 82 68.3
Eucgr.C02440 Eucalyptus grandis HOM05D005241 ORTHO05D005862 3.5e-25 118.2 78 73.1
Nitab4.5_0000168g0090 Nicotiana tabacum HOM05D005241 ORTHO05D005862 3.5e-25 118.2 79 74.7
Nitab4.5_0006743g0030 Nicotiana tabacum HOM05D005241 ORTHO05D005862 6.0e-25 117.5 79 73.4
Phvul.003G150200 Phaseolus vulgaris HOM05D005241 ORTHO05D005862 6.0e-25 117.5 79 68.4
Psat4g010800 Pisum sativum HOM05D005241 ORTHO05D005862 6.0e-25 117.5 79 69.6
EL10Ac8g18255 Beta vulgaris HOM05D005241 ORTHO05D005862 7.8e-25 117.1 74 79.7
PSO384G1775 Papaver somniferum HOM05D005241 ORTHO05D005862 7.8e-25 117.1 79 72.2
SalBow6G2671 Salvia bowleyana HOM05D005241 ORTHO05D005862 7.8e-25 117.1 74 78.4
Solyc12g014440.2 Solanum lycopersicum HOM05D005241 ORTHO05D005862 2.3e-24 115.5 79 73.4
Sopen12g007320 Solanum pennellii HOM05D005241 ORTHO05D005862 2.3e-24 115.5 79 73.4
Lj9A730T54 Lonicera japonica HOM05D005241 ORTHO05D005862 3.9e-24 114.8 74 74.3
EL10Ac9g22414 Beta vulgaris HOM05D005241 ORTHO05D005862 5.1e-24 114.4 74 70.3
Cc06_g13790 Coffea canephora HOM05D005241 ORTHO05D005862 5.1e-24 114.4 74 75.7
Dinv42767 Davidia involucrata HOM05D005241 ORTHO05D005862 5.1e-24 114.4 79 73.4
Dinv43336 Davidia involucrata HOM05D005241 ORTHO05D005862 5.1e-24 114.4 79 73.4
QL02p096102 Quercus lobata HOM05D005241 ORTHO05D005862 5.1e-24 114.4 74 75.7
Sabra18G0084300 Salix brachista HOM05D005241 ORTHO05D005862 5.1e-24 114.4 76 72.4
Hund26388 Selenicereus undatus HOM05D005241 ORTHO05D005862 8.7e-24 113.6 84 63.1
Lj4g0014860 Lotus japonicus HOM05D005241 ORTHO05D005862 1.9e-23 112.5 74 74.3
CsaV3_1G029530 Cucumis sativus L. HOM05D005241 ORTHO05D005862 2.5e-23 112.1 82 64.6
PGSC0003DMG400012851 Solanum tuberosum HOM05D005241 ORTHO05D005862 1.6e-22 109.4 74 74.3
MELO3C029512.2 Cucumis melo HOM05D005241 ORTHO05D005862 2.1e-22 109.0 76 67.1
MBI18_g46216_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 2.1e-22 109.0 74 70.3
Mapoly0080s0044 Marchantia polymorpha HOM05D005241 ORTHO05D005862 1.8e-21 105.9 80 67.5
Peaxi162Scf00339g00098 Petunia axillaris HOM05D005241 ORTHO05D005862 1.8e-21 105.9 74 71.6
Peaxi162Scf00078g00547 Petunia axillaris HOM05D005241 ORTHO05D005862 3.1e-21 105.1 74 70.3
Hma1.2p1_0921F.1_g236680 Hydrangea macrophylla HOM05D005241 ORTHO05D005862 3.8e-19 98.2 68 69.1
Hma1.2p1_2604F.1_g325280 Hydrangea macrophylla HOM05D005241 ORTHO05D005862 3.8e-19 98.2 68 69.1
SMO351G0057 Selaginella moellendorffii HOM05D005241 ORTHO05D005862 1.1e-18 96.7 73 64.4
Pp3c3_37310 Physcomitrium patens HOM05D005241 ORTHO05D005862 2.1e-17 92.4 73 63.0
Zm00001eb105910 Zea mays HOM05D005241 ORTHO05D005862 6.2e-14 80.9 56 67.9
Peaxi162Scf00014g00192 Petunia axillaris HOM05D005241 ORTHO05D005862 1.4e-13 79.7 59 67.8
Zm00001eb105960 Zea mays HOM05D005241 ORTHO05D005862 2.5e-10 68.9 46 65.2
Nitab4.5_0000692g0020 Nicotiana tabacum HOM05D005241 ORTHO05D005862 3.2e-10 68.6 51 64.7
SHI03002 Sapria himalayana HOM05D005241 ORTHO05D005862 2.8e-06 55.5 81 32.1
AagrBONN_evm.TU.Sc2ySwM_228.5641 Anthoceros agrestis HOM05D005241 ORTHO05D005862 3.7e-06 55.1 85 34.1


User provided reference genes

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