Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc08g0004760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.8e-37 158.7 75 100.0
Sc05g0005050 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-22 109.4 66 74.2
Sc11g0004150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-22 109.0 68 73.5
Sc17g0003520 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.1e-22 107.1 66 77.3
Sc13g0008210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.7e-21 103.6 67 71.6
Sc17g0002860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-20 102.8 77 66.2
Sc06g0004250 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-20 102.4 68 66.2
Sc15g0002320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.6e-20 101.7 66 69.7
Sc08g0005440 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.7e-20 100.5 66 68.2
Sc03g0004300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.4e-20 100.1 67 71.6
Sc02g0004970 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.2e-19 98.6 61 75.4
Sc01g0006390 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.7e-19 97.8 65 66.2
Sc05g0005690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.2e-19 96.7 72 63.9
Sc13g0007430 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.2e-19 96.7 66 63.6
Sc22g0004320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.4e-18 95.1 67 64.2
Sc02g0004980 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.3e-18 94.0 66 63.6
Sc12g0007100 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.1e-18 93.2 66 68.2
Sc21g0003860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.1e-18 93.2 65 66.2
Sc14g0002490 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-17 92.4 72 58.3
Sc04g0004840 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.7e-17 90.1 63 65.1
Sc07g0004510 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.7e-17 90.1 67 64.2
Sc23g0003790 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.7e-17 90.1 68 63.2
Sc24g0001130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.7e-17 90.1 69 62.3
Sc10g0007340 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.0e-16 89.7 68 58.8
Sc24g0001190 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.2e-16 88.6 66 60.6
Sc08g0005480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.9e-16 88.2 53 69.8
Sc05g0004430 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.0e-16 87.4 66 68.2
Sc17g0003130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.9e-15 85.5 64 62.5
Sabra13G0012400 Salix brachista HOM05D020966 ORTHO05D010251 5.5e-15 84.0 63 58.7
Sc05g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.5e-15 84.0 60 65.0
Sc01g0005460 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.4e-15 83.2 61 63.9
Sc24g0001220 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.4e-15 83.2 65 60.0
Sc17g0003650 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.6e-14 81.3 62 59.7
Sc02g0004160 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.1e-14 80.5 53 69.8
Sc05g0004680 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.8e-13 77.0 69 53.6
Sc02g0004810 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.8e-13 76.6 51 62.7
Sc03g0005210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-12 76.3 67 53.7
Sc07g0005080 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.0e-12 75.5 68 55.9
Sc18g0005300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.4e-12 74.3 56 60.7
Sc01g0006550 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.1e-10 67.8 66 53.0
Sc10g0007130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.3e-10 67.4 44 65.9
Sc22g0004270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.1e-10 66.6 40 65.0
Sc17g0003150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.5e-09 64.3 94 40.4
Sc02g0005760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.5e-08 60.5 36 69.4
Sc14g0004880 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-07 59.7 37 70.3
Sc12g0008150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-07 59.3 36 72.2
Ah.11g044760 Amaranthus hybridus HOM05D020966 ORTHO05D023391 2.5e-07 58.5 62 46.8
Sc02g0004890 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.5e-07 57.4 36 72.2
Nitab4.5_0001698g0060 Nicotiana tabacum HOM05D008778 ORTHO05D003639 1.2e-06 56.2 62 41.9
Sc02g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-06 55.8 29 79.3
RcHm_v2.0_Chr5g0004321 Rosa chinensis HOM05D008702 ORTHO05D003639 2.1e-06 55.5 64 39.1
Sc20g0002780 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.7e-06 55.1 38 63.2
Sc26g0003020 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.6e-06 54.7 37 64.9
RcHm_v2.0_Chr2g0152981 Rosa chinensis HOM05D008702 ORTHO05D003639 4.7e-06 54.3 64 42.2
RcHm_v2.0_Chr2g0121071 Rosa chinensis HOM05D008702 ORTHO05D003639 6.1e-06 53.9 64 40.6


User provided reference genes

Program Settings