Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc08g0004310 Simmondsia chinensis HOM05D010674 ORTHO05D012685 4.6e-70 267.7 127 100.0
Sc11g0002590 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.2e-46 189.9 121 77.7
Sc12g0007830 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.3e-37 159.8 113 71.7
Sc17g0004480 Simmondsia chinensis HOM05D010674 ORTHO05D012685 4.5e-33 144.8 119 66.4
Sc03g0005810 Simmondsia chinensis HOM05D010674 ORTHO05D012685 9.9e-33 143.7 119 67.2
Sc18g0002930 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.9e-31 139.4 118 65.3
Sc02g0004660 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.0e-16 90.5 89 52.8
Sc10g0005220 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.7e-16 89.7 44 95.5
Sc18g0002940 Simmondsia chinensis HOM05D010674 ORTHO05D012685 6.5e-16 87.8 48 87.5
Sc05g0002760 Simmondsia chinensis HOM05D010674 ORTHO05D012685 2.7e-14 82.4 43 90.7
Hund07415 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.0e-13 79.0 128 38.3
Sc25g0003090 Simmondsia chinensis HOM05D010674 ORTHO05D012685 7.4e-12 74.3 45 75.6
Sc11g0006030 Simmondsia chinensis HOM05D010674 ORTHO05D012685 4.8e-11 71.6 44 70.5
Sc13g0007340 Simmondsia chinensis HOM05D001385 ORTHO05D004434 4.8e-11 71.6 118 33.9
Sc11g0005960 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.8e-10 69.7 44 70.5
EL10Ac1g01824 Beta vulgaris HOM05D001385 ORTHO05D008760 2.0e-09 66.2 117 35.0
COL.COLO4_15867 Corchorus olitorius HOM05D001309 ORTHO05D004434 4.5e-09 65.1 111 34.2
Sc11g0003480 Simmondsia chinensis HOM05D010674 ORTHO05D012685 5.9e-09 64.7 43 67.4
COL.COLO4_15532 Corchorus olitorius HOM05D001309 ORTHO05D000385 7.7e-09 64.3 111 33.3
EL10Ac5g11714 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-08 63.2 117 34.2
Sc08g0003870 Simmondsia chinensis HOM05D010674 ORTHO05D012685 2.2e-08 62.8 43 67.4
ClCG06G005780 Citrullus lanatus HOM05D001309 ORTHO05D000385 2.9e-08 62.4 104 31.7
Sc08g0005020 Simmondsia chinensis HOM05D004066 ORTHO05D004434 5.0e-08 61.6 42 69.0
AUR62028470 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.4e-07 60.1 130 32.3
Sc02g0005790 Simmondsia chinensis HOM05D010674 ORTHO05D012685 1.4e-07 60.1 45 66.7
Sc02g0007440 Simmondsia chinensis HOM05D009609 ORTHO05D011572 2.5e-07 59.3 120 32.5
AUR62020405 Chenopodium quinoa HOM05D001385 ORTHO05D008760 7.2e-07 57.8 119 32.8
Nitab4.5_0004285g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 7.2e-07 57.8 117 35.0
arahy.Tifrunner.gnm1.ann1.5MEJ54 Arachis hypogaea HOM05D010482 ORTHO05D000385 1.6e-06 56.6 119 27.7
AUR62043798 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.6e-06 56.6 116 32.8
Sc14g0001950 Simmondsia chinensis HOM05D010674 ORTHO05D012685 4.7e-06 55.1 38 63.2
COL.COLO4_06576 Corchorus olitorius HOM05D001309 ORTHO05D000385 7.9e-06 54.3 111 28.8
Hund24609 Selenicereus undatus HOM05D001385 ORTHO05D008760 7.9e-06 54.3 77 39.0


User provided reference genes

Program Settings