Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 3.7e-84 314.7 143 100.0
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 3.0e-46 188.7 136 58.8
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 1.2e-45 186.8 134 61.2
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 2.6e-45 185.7 138 58.0
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 7.5e-45 184.1 111 70.3
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 1.7e-44 183.0 122 64.8
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 2.2e-44 182.6 139 59.0
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 3.7e-44 181.8 137 59.1
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 1.4e-43 179.9 113 67.3
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 1.4e-43 179.9 101 72.3
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 3.1e-43 178.7 116 67.2
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 7.0e-43 177.6 117 65.8
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 1.2e-42 176.8 102 70.6
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.6e-42 176.4 115 65.2
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 2.0e-42 176.0 113 65.5
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 2.0e-42 176.0 126 60.3
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 2.0e-42 176.0 116 64.7
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 3.5e-42 175.3 116 63.8
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 3.5e-42 175.3 104 68.3
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 4.5e-42 174.9 126 59.5
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 5.9e-42 174.5 104 69.2
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 5.9e-42 174.5 115 62.6
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 5.9e-42 174.5 136 53.7
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 7.7e-42 174.1 112 67.0
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 1.3e-41 173.3 124 59.7
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 1.7e-41 172.9 143 56.6
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 1.7e-41 172.9 104 70.2
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 2.3e-41 172.6 104 69.2
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 2.3e-41 172.6 122 61.5
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 3.8e-41 171.8 144 56.2
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 3.8e-41 171.8 135 56.3
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 3.8e-41 171.8 116 61.2
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 5.0e-41 171.4 116 63.8
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 5.0e-41 171.4 116 63.8
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 5.0e-41 171.4 116 63.8
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 5.0e-41 171.4 144 56.2
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 6.5e-41 171.0 138 53.6
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 8.6e-41 170.6 104 67.3
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 1.5e-40 169.9 107 68.2
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 1.5e-40 169.9 94 69.1
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 1.5e-40 169.9 116 60.3
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 1.9e-40 169.5 118 65.3
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 2.5e-40 169.1 118 64.4
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 3.3e-40 168.7 116 62.9
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 3.3e-40 168.7 121 59.5
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 4.2e-40 168.3 138 56.5
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 5.5e-40 167.9 116 61.2
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 7.2e-40 167.5 116 62.1
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 7.2e-40 167.5 123 60.2
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 9.5e-40 167.2 120 61.7
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 2.8e-39 165.6 116 63.8
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 2.8e-39 165.6 116 63.8
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 2.8e-39 165.6 116 63.8
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 2.8e-39 165.6 123 61.8
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 2.8e-39 165.6 108 62.0
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 3.6e-39 165.2 119 63.9
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 3.6e-39 165.2 120 63.3
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 3.6e-39 165.2 136 57.4
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 3.6e-39 165.2 136 57.4
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 3.6e-39 165.2 100 68.0
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 3.6e-39 165.2 136 55.9
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 4.7e-39 164.9 136 57.4
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 6.1e-39 164.5 116 60.3
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 6.1e-39 164.5 118 62.7
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 1.0e-38 163.7 116 62.9
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 1.0e-38 163.7 118 61.0
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 1.4e-38 163.3 138 57.2
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 3.0e-38 162.2 120 60.8
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 3.0e-38 162.2 120 60.8
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 3.0e-38 162.2 125 52.8
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 4.0e-38 161.8 116 62.1
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 6.8e-38 161.0 124 60.5
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 6.8e-38 161.0 94 66.0
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 6.8e-38 161.0 96 69.8
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 8.9e-38 160.6 100 65.0
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 4.4e-37 158.3 124 54.8
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 9.8e-37 157.1 115 57.4
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 2.8e-36 155.6 88 67.0
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 1.8e-35 152.9 116 55.2
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 3.1e-35 152.1 118 59.3
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 4.1e-35 151.8 129 52.7
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 4.1e-35 151.8 124 50.0
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 2.0e-34 149.4 89 65.2
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 7.8e-34 147.5 117 58.1
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 1.1e-32 143.7 136 47.8
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 2.5e-32 142.5 117 56.4
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 5.6e-32 141.4 91 61.5
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 2.8e-31 139.0 88 62.5
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 2.9e-28 129.0 124 50.8
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 8.3e-28 127.5 117 53.0
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 9.2e-27 124.0 114 54.4
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 9.2e-27 124.0 94 58.5
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 7.8e-26 120.9 117 51.3
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 8.9e-22 107.5 59 72.9
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 9.8e-21 104.0 124 41.1
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 6.0e-18 94.7 57 66.7
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 6.4e-12 74.7 48 58.3
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 8.3e-12 74.3 57 54.4
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 1.1e-11 73.9 66 50.0
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 1.9e-11 73.2 63 52.4
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 4.3e-08 62.0 31 80.6


User provided reference genes

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