Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc08g0003780 Simmondsia chinensis HOM05D007310 ORTHO05D002375 1.4e-106 389.8 222 100.0
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 3.5e-25 119.4 221 41.6
Potri.001G310100 Populus trichocarpa HOM05D007310 ORTHO05D002375 4.6e-25 119.0 220 42.3
AUR62011722 Chenopodium quinoa HOM05D007310 ORTHO05D002375 1.9e-23 113.6 212 41.5
AUR62012905 Chenopodium quinoa HOM05D007310 ORTHO05D002375 4.7e-22 109.0 216 42.6
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 1.4e-21 107.5 220 38.2
Ciclev10030152m.g Citrus clementina HOM05D007310 ORTHO05D002375 1.7e-19 100.5 152 48.0
Manes.07G035800 Manihot esculenta HOM05D007310 ORTHO05D002375 1.7e-19 100.5 223 37.7
PGR142G1548 Punica granatum HOM05D007310 ORTHO05D002375 2.9e-19 99.8 229 38.9
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 3.2e-18 96.3 222 36.9
EL10Ac9g21224 Beta vulgaris HOM05D007310 ORTHO05D002375 4.2e-18 95.9 216 35.6
CSS0047922 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 7.1e-18 95.1 229 39.7
Manes.07G038100 Manihot esculenta HOM05D007310 ORTHO05D002375 9.3e-18 94.7 154 46.1
AT2G14095 Arabidopsis thaliana HOM05D007310 ORTHO05D002375 1.2e-17 94.4 210 32.4
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 1.2e-17 94.4 220 35.0
Carub.0003s2834 Capsella rubella HOM05D007310 ORTHO05D002375 3.5e-17 92.8 211 32.2
AL3G45790 Arabidopsis lyrata HOM05D007310 ORTHO05D002375 4.6e-17 92.4 210 33.8
Nitab4.5_0000863g0020 Nicotiana tabacum HOM05D007310 ORTHO05D002375 4.6e-17 92.4 227 33.5
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 1.0e-16 91.3 205 33.7
Hma1.2p1_0784F.1_g217300 Hydrangea macrophylla HOM05D007310 ORTHO05D002375 1.3e-16 90.9 121 52.9
CAN.G523.36 Capsicum annuum HOM05D007310 ORTHO05D002375 1.7e-16 90.5 212 34.9
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 1.7e-16 90.5 140 47.9
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 3.9e-16 89.4 132 37.1
Sp3g27450 Schrenkiella parvula HOM05D007310 ORTHO05D002375 3.9e-16 89.4 215 38.6
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 5.1e-16 89.0 132 39.4
Thecc.02G133200 Theobroma cacao HOM05D007310 ORTHO05D002375 5.1e-16 89.0 151 44.4
CARHR104210 Cardamine hirsuta HOM05D007310 ORTHO05D002375 1.1e-15 87.8 223 30.5
Duzib248G0762 Durio zibethinus HOM05D007310 ORTHO05D002375 1.1e-15 87.8 168 42.3
Glyma.13G042400 Glycine max HOM05D007310 ORTHO05D002375 1.1e-15 87.8 210 38.6
Prupe.8G066300 Prunus persica HOM05D007310 ORTHO05D002375 1.9e-15 87.0 217 38.7
Cfa005685 Carpinus fangiana HOM05D007310 ORTHO05D002375 2.5e-15 86.7 137 46.7
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 3.3e-15 86.3 139 47.5
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 3.3e-15 86.3 152 34.2
CiPaw.06G156100 Carya illinoinensis HOM05D007310 ORTHO05D002375 5.6e-15 85.5 137 50.4
MD05G1054900 Malus domestica HOM05D007310 ORTHO05D002375 5.6e-15 85.5 211 39.3
arahy.Tifrunner.gnm1.ann1.KVX74B Arachis hypogaea HOM05D007310 ORTHO05D002375 9.6e-15 84.7 197 39.6
arahy.Tifrunner.gnm1.ann1.U7VQVC Arachis hypogaea HOM05D007310 ORTHO05D002375 9.6e-15 84.7 197 39.6
ECA234G2182 Erigeron canadensis HOM05D007310 ORTHO05D002375 1.3e-14 84.3 170 42.9
HanXRQChr10g0290991 Helianthus annuus HOM05D007310 ORTHO05D002375 2.1e-14 83.6 149 42.3
FAN24G3359 Fragaria x ananassa HOM05D007310 ORTHO05D004145 2.8e-14 83.2 161 34.2
VMungo0251G1327 Vigna mungo HOM05D007310 ORTHO05D002375 2.8e-14 83.2 214 36.4
CANSAT11G0123 Cannabis sativa HOM05D007310 ORTHO05D002375 4.8e-14 82.4 224 34.8
FvH4_2g13500 Fragaria vesca HOM05D007310 ORTHO05D002375 6.2e-14 82.0 161 33.5
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 6.2e-14 82.0 215 29.3
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 8.1e-14 81.6 128 50.8
Cc02_g21140 Coffea canephora HOM05D007310 ORTHO05D002375 1.1e-13 81.3 217 37.8
Potri.017G050000 Populus trichocarpa HOM05D007310 ORTHO05D002375 1.4e-13 80.9 194 40.2
COL.COLO4_32323 Corchorus olitorius HOM05D007310 ORTHO05D002375 1.8e-13 80.5 225 36.0
RcHm_v2.0_Chr7g0236611 Rosa chinensis HOM05D007310 ORTHO05D002375 1.8e-13 80.5 171 38.6
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 4.0e-13 79.3 194 40.7
Cpa.g.sc42.21 Carica papaya HOM05D007310 ORTHO05D002375 6.9e-13 78.6 228 37.3
FAN27G1440 Fragaria x ananassa HOM05D007310 ORTHO05D002375 6.9e-13 78.6 170 34.1
GSVIVG01015685001 Vitis vinifera HOM05D007310 ORTHO05D002375 6.9e-13 78.6 224 28.6
CiPaw.05G032100 Carya illinoinensis HOM05D007310 ORTHO05D002375 1.5e-12 77.4 127 49.6
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 1.5e-12 77.4 146 41.1
Solyc01g105600.3 Solanum lycopersicum HOM05D007310 ORTHO05D002375 1.5e-12 77.4 215 29.3
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 2.6e-12 76.6 155 44.5
QL11p023211 Quercus lobata HOM05D007310 ORTHO05D002375 3.4e-12 76.3 185 38.4
Sopen01g048060 Solanum pennellii HOM05D007310 ORTHO05D002375 3.4e-12 76.3 215 28.8
THA.LOC104804411 Tarenaya hassleriana HOM05D007310 ORTHO05D002375 3.4e-12 76.3 132 55.3
TPR.G2868 Trifolium pratense HOM05D007310 ORTHO05D002375 5.8e-12 75.5 221 34.8
Phvul.002G211100 Phaseolus vulgaris HOM05D007310 ORTHO05D002375 9.9e-12 74.7 211 37.4
FAN15G0442 Fragaria x ananassa HOM05D007310 ORTHO05D002375 1.3e-11 74.3 126 48.4
Sabra17G0036600 Salix brachista HOM05D007310 ORTHO05D002375 1.3e-11 74.3 99 47.5
BcaB08g34551 Brassica carinata HOM05D007310 ORTHO05D002375 2.9e-11 73.2 160 38.1
BcaC01g03103 Brassica carinata HOM05D007310 ORTHO05D002375 2.9e-11 73.2 210 34.3
Sabra17G0042000 Salix brachista HOM05D007310 ORTHO05D002375 2.9e-11 73.2 99 47.5
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 2.9e-11 73.2 117 35.9
TAR376G0136 Trochodendron aralioides HOM05D007310 ORTHO05D002375 2.9e-11 73.2 147 46.9
Ca_18369_v3 Cicer arietinum L. HOM05D007310 ORTHO05D002375 4.9e-11 72.4 220 36.8
Psat7g100440 Pisum sativum HOM05D007310 ORTHO05D002375 6.4e-11 72.0 141 44.7
TWI14G0938 Tripterygium wilfordii HOM05D007310 ORTHO05D002375 1.1e-10 71.2 229 31.9
Thhalv10022863m.g Eutrema salsugineum HOM05D007310 ORTHO05D002375 4.2e-10 69.3 185 28.6
C03p56020 Brassica napus HOM05D007310 ORTHO05D002375 7.1e-10 68.6 211 34.6
BolC3t17888H Brassica oleracea HOM05D007310 ORTHO05D002375 7.1e-10 68.6 211 34.6
Lj4g0014623 Lotus japonicus HOM05D007310 ORTHO05D002375 1.2e-09 67.8 218 33.9
Glyma.08G070200 Glycine max HOM05D007310 ORTHO05D002375 2.7e-09 66.6 229 33.2
Medtr4g093820 Medicago truncatula HOM05D007310 ORTHO05D002375 3.5e-09 66.2 152 37.5
CSS0048944 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 1.8e-08 63.9 59 52.5
MBI06_g03314_MAGBIO Magnolia biondii HOM05D007310 ORTHO05D002375 1.8e-08 63.9 149 41.6
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 1.8e-08 63.9 107 38.3
A03p45150 Brassica napus HOM05D007310 ORTHO05D002375 3.9e-08 62.8 210 34.3
BraA03t13650Z Brassica rapa HOM05D007310 ORTHO05D002375 5.1e-08 62.4 210 33.3
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 8.7e-08 61.6 172 37.2
CSS0024408 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 2.5e-07 60.1 67 49.3
Gohir.D02G199400 Gossypium hirsutum HOM05D007310 ORTHO05D002375 3.3e-07 59.7 137 42.3
Atru.chr6.1218 Acer truncatum HOM05D007310 ORTHO05D002375 5.6e-07 58.9 62 48.4
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 9.6e-07 58.2 123 44.7
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 2.1e-06 57.0 131 45.0
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.8e-06 56.6 114 48.2
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 4.8e-06 55.8 106 50.9
ClCG09G015950 Citrullus lanatus HOM05D007310 ORTHO05D002375 8.1e-06 55.1 103 47.6


User provided reference genes

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