Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc08g0003530 Simmondsia chinensis HOM05D004164 ORTHO05D004891 1.9e-187 659.1 334 100.0
CSS0002795 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.9e-152 542.7 328 81.7
arahy.Tifrunner.gnm1.ann1.XH6BES Arachis hypogaea HOM05D004164 ORTHO05D004891 4.3e-152 541.6 329 80.5
CSS0040430 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 5.6e-152 541.2 328 81.4
AUR62013150 Chenopodium quinoa HOM05D004164 ORTHO05D004891 2.8e-151 538.9 346 78.0
Ah.01g022180 Amaranthus hybridus HOM05D004164 ORTHO05D004891 1.8e-150 536.2 331 78.5
Hma1.2p1_0784F.1_g217100 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 1.8e-150 536.2 329 79.9
THA.LOC104799917 Tarenaya hassleriana HOM05D004164 ORTHO05D004891 5.3e-150 534.6 325 79.4
Actinidia24002 Actinidia chinensis HOM05D004164 ORTHO05D004891 6.9e-150 534.3 329 80.9
Eucgr.G00847 Eucalyptus grandis HOM05D004164 ORTHO05D004891 4.5e-149 531.6 329 78.4
TPR.G10321 Trifolium pratense HOM05D004164 ORTHO05D004891 4.5e-149 531.6 330 77.6
Duzib132G1201 Durio zibethinus HOM05D004164 ORTHO05D004891 7.6e-149 530.8 329 78.4
Hund00072 Selenicereus undatus HOM05D004164 ORTHO05D004891 1.3e-148 530.0 331 79.2
Thecc.02G135100 Theobroma cacao HOM05D004164 ORTHO05D004891 4.9e-148 528.1 325 78.8
Prupe.8G064000 Prunus persica HOM05D004164 ORTHO05D004891 1.4e-147 526.6 331 78.9
CiPaw.05G034200 Carya illinoinensis HOM05D004164 ORTHO05D004891 1.9e-147 526.2 329 77.8
A06p30940 Brassica napus HOM05D004164 ORTHO05D004891 4.2e-147 525.0 329 79.6
BraA06t26033Z Brassica rapa HOM05D004164 ORTHO05D004891 4.2e-147 525.0 329 79.6
Glyma.08G178100 Glycine max HOM05D004164 ORTHO05D004891 4.2e-147 525.0 330 77.6
Manes.07G033800 Manihot esculenta HOM05D004164 ORTHO05D004891 4.2e-147 525.0 329 78.7
PGR042G3604 Punica granatum HOM05D004164 ORTHO05D004891 4.2e-147 525.0 328 77.1
Lalb_Chr20g0122971 Lupinus albus HOM05D004164 ORTHO05D004891 5.5e-147 524.6 325 79.1
Ciclev10028812m.g Citrus clementina HOM05D004164 ORTHO05D004891 7.1e-147 524.2 329 76.9
CAN.G523.53 Capsicum annuum HOM05D004164 ORTHO05D004891 1.6e-146 523.1 329 76.9
Ca_16502_v3 Cicer arietinum L. HOM05D004164 ORTHO05D004891 2.7e-146 522.3 330 77.9
Potri.017G051800 Populus trichocarpa HOM05D004164 ORTHO05D004891 2.7e-146 522.3 329 78.7
RcHm_v2.0_Chr6g0271551 Rosa chinensis HOM05D004164 ORTHO05D004891 2.7e-146 522.3 329 78.7
TAR381G0722 Trochodendron aralioides HOM05D004164 ORTHO05D004891 2.7e-146 522.3 329 78.4
Lsat_1_v5_gn_5_108141 Lactuca sativa HOM05D004164 ORTHO05D004891 3.5e-146 521.9 329 76.0
Peaxi162Scf01060g00013 Petunia axillaris HOM05D004164 ORTHO05D004891 3.5e-146 521.9 325 78.5
Thhalv10004559m.g Eutrema salsugineum HOM05D004164 ORTHO05D004891 4.6e-146 521.5 330 79.1
PGSC0003DMG400012550 Solanum tuberosum HOM05D004164 ORTHO05D004891 4.6e-146 521.5 329 77.2
Medtr3g069190 Medicago truncatula HOM05D004164 ORTHO05D004891 6.0e-146 521.2 330 77.3
HanXRQChr10g0291731 Helianthus annuus HOM05D004164 ORTHO05D004891 7.9e-146 520.8 325 76.9
TWI14G1169 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 1.0e-145 520.4 331 77.9
AT5G64250 Arabidopsis thaliana HOM05D004164 ORTHO05D004891 1.8e-145 519.6 326 78.2
Atru.chr6.1169 Acer truncatum HOM05D004164 ORTHO05D004891 2.3e-145 519.2 329 76.9
Gohir.A12G015600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 2.3e-145 519.2 329 77.5
BcaC01g02680 Brassica carinata HOM05D004164 ORTHO05D004891 3.0e-145 518.8 330 79.1
BolC3t18463H Brassica oleracea HOM05D004164 ORTHO05D004891 3.0e-145 518.8 330 79.1
Cfa005671 Carpinus fangiana HOM05D004164 ORTHO05D004891 3.0e-145 518.8 329 77.5
Dinv24178 Davidia involucrata HOM05D004164 ORTHO05D004891 3.0e-145 518.8 329 77.2
Gohir.D12G015900 Gossypium hirsutum HOM05D004164 ORTHO05D004891 3.9e-145 518.5 329 76.9
Nitab4.5_0000863g0200 Nicotiana tabacum HOM05D004164 ORTHO05D004891 3.9e-145 518.5 329 76.6
Sopen01g047880 Solanum pennellii HOM05D004164 ORTHO05D004891 3.9e-145 518.5 331 76.1
Gorai.008G016000 Gossypium raimondii HOM05D004164 ORTHO05D004891 5.1e-145 518.1 329 76.9
CARHR278160 Cardamine hirsuta HOM05D004164 ORTHO05D004891 6.7e-145 517.7 329 77.5
Carub.0008s2504 Capsella rubella HOM05D004164 ORTHO05D004891 1.1e-144 516.9 330 77.3
Aa31LG1G17650 Aethionema arabicum HOM05D004164 ORTHO05D004891 1.5e-144 516.5 330 76.4
C03p62030 Brassica napus HOM05D004164 ORTHO05D004891 2.5e-144 515.8 330 78.8
AL8G41570 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 3.3e-144 515.4 326 78.5
Migut.B00589 Erythranthe guttata HOM05D004164 ORTHO05D004891 3.3e-144 515.4 330 76.1
QL11p022503 Quercus lobata HOM05D004164 ORTHO05D004891 3.3e-144 515.4 328 76.8
Sabra17G0043400 Salix brachista HOM05D004164 ORTHO05D004891 3.3e-144 515.4 329 76.6
SabraUnG0002700 Salix brachista HOM05D004164 ORTHO05D004891 3.3e-144 515.4 329 76.6
Lj5A235T51 Lonicera japonica HOM05D004164 ORTHO05D004891 4.3e-144 515.0 329 76.6
Psat5g128640 Pisum sativum HOM05D004164 ORTHO05D004891 5.6e-144 514.6 330 76.1
GSVIVG01015759001 Vitis vinifera HOM05D004164 ORTHO05D004891 5.6e-144 514.6 329 76.6
CANSAT11G1236 Cannabis sativa HOM05D004164 ORTHO05D004891 7.4e-144 514.2 329 77.8
AL8G41600 Arabidopsis lyrata HOM05D004164 ORTHO05D004891 9.6e-144 513.8 326 78.2
Sp2g27310 Schrenkiella parvula HOM05D004164 ORTHO05D004891 1.3e-143 513.5 329 77.8
Cc02_g21290 Coffea canephora HOM05D004164 ORTHO05D004891 1.6e-143 513.1 329 74.5
Solyc01g105370.4 Solanum lycopersicum HOM05D004164 ORTHO05D004891 1.6e-143 513.1 331 75.8
Aqoxy6G02071 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 2.1e-143 512.7 331 75.2
BcaB02g09775 Brassica carinata HOM05D004164 ORTHO05D004891 3.7e-143 511.9 329 77.8
Phvul.006G205400 Phaseolus vulgaris HOM05D004164 ORTHO05D004891 6.2e-143 511.1 330 76.1
Rhsim11G0139400 Rhododendron simsii HOM05D004164 ORTHO05D004891 6.2e-143 511.1 326 77.9
vmacro01837 Vaccinium macrocarpon HOM05D004164 ORTHO05D004891 6.2e-143 511.1 328 77.7
FAN18G3873 Fragaria x ananassa HOM05D004164 ORTHO05D004891 8.1e-143 510.8 329 76.0
MSTRG.20292 Avicennia marina HOM05D004164 ORTHO05D004891 1.1e-142 510.4 329 76.6
ECA234G4615 Erigeron canadensis HOM05D004164 ORTHO05D004891 1.8e-142 509.6 325 75.7
SalBow5G1609 Salvia bowleyana HOM05D004164 ORTHO05D004891 4.0e-142 508.4 360 70.6
arahy.Tifrunner.gnm1.ann1.IF3X13 Arachis hypogaea HOM05D004164 ORTHO05D004891 1.2e-141 506.9 329 76.6
DCAR_001777 Daucus carota HOM05D004164 ORTHO05D004891 1.5e-141 506.5 325 76.6
TWI59G0238 Tripterygium wilfordii HOM05D004164 ORTHO05D004891 1.5e-141 506.5 331 76.1
SalBow5G4318 Salvia bowleyana HOM05D004164 ORTHO05D004891 2.6e-141 505.8 360 70.3
RcHm_v2.0_Chr6g0271711 Rosa chinensis HOM05D004164 ORTHO05D004891 3.4e-141 505.4 330 77.0
Lj4g0000280 Lotus japonicus HOM05D004164 ORTHO05D004891 1.3e-140 503.4 325 75.1
MD05G1043200 Malus domestica HOM05D004164 ORTHO05D004891 1.3e-140 503.4 331 75.2
PSO210G2683 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-140 503.4 330 74.2
VMungo0540G2402 Vigna mungo HOM05D004164 ORTHO05D004891 1.3e-140 503.4 325 76.6
Oeu007975.1 Olea europaea HOM05D004164 ORTHO05D004891 2.2e-140 502.7 402 65.9
Lj6g0000010 Lotus japonicus HOM05D004164 ORTHO05D004891 2.9e-140 502.3 330 73.3
MELO3C018623.2 Cucumis melo HOM05D004164 ORTHO05D004891 6.5e-140 501.1 325 75.4
Sed0011830 Sechium edule HOM05D004164 ORTHO05D004891 1.2e-138 496.9 329 72.9
ClCG09G015620 Citrullus lanatus HOM05D004164 ORTHO05D004891 4.6e-138 495.0 329 73.9
Gohir.A04G114200 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.1e-136 490.3 331 71.6
CsaV3_7G006720 Cucumis sativus L. HOM05D004164 ORTHO05D004891 1.4e-134 483.4 313 75.1
Cpa.g.sc42.29 Carica papaya HOM05D004164 ORTHO05D004891 2.9e-132 475.7 348 69.8
EL10Ac9g21504 Beta vulgaris HOM05D004164 ORTHO05D004891 4.2e-131 471.9 329 72.6
ATR0782G002 Amborella trichopoda HOM05D004164 ORTHO05D004891 1.2e-130 470.3 317 72.2
Gorai.012G142600 Gossypium raimondii HOM05D004164 ORTHO05D004891 3.9e-129 465.3 331 68.9
Zm00001eb033580 Zea mays HOM05D004164 ORTHO05D004891 2.9e-124 449.1 328 68.0
Gohir.D04G155600 Gossypium hirsutum HOM05D004164 ORTHO05D004891 1.8e-121 439.9 331 66.2
AUR62010154 Chenopodium quinoa HOM05D004164 ORTHO05D004891 1.7e-119 433.3 346 67.3
FvH4_5g07040 Fragaria vesca HOM05D004164 ORTHO05D004891 7.7e-117 424.5 284 73.9
HPP92_004281 Vanilla planifolia HOM05D004164 ORTHO05D004891 9.4e-115 417.5 329 66.0
SGA_v2.0_scaffold83G26314 Striga asiatica HOM05D004164 ORTHO05D004891 1.3e-111 407.1 353 60.9
MBI02_g02171_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.1e-104 384.0 284 68.0
Pp3c2_200 Physcomitrium patens HOM05D004164 ORTHO05D004891 1.5e-104 383.6 326 58.9
SMO143G0159 Selaginella moellendorffii HOM05D004164 ORTHO05D004891 9.7e-104 380.9 328 59.1
Os08g0485400 Oryza sativa ssp. japonica HOM05D004164 ORTHO05D004891 5.3e-102 375.2 270 68.1
Mapoly0043s0005 Marchantia polymorpha HOM05D004164 ORTHO05D004891 2.1e-98 363.2 332 58.4
Lj6g0021052 Lotus japonicus HOM05D004164 ORTHO05D004891 2.7e-98 362.8 225 76.9
AagrBONN_evm.TU.Sc2ySwM_228.2787 Anthoceros agrestis HOM05D004164 ORTHO05D004891 7.5e-96 354.8 323 56.0
TAR365G1146 Trochodendron aralioides HOM05D004164 ORTHO05D004891 2.0e-93 346.7 328 54.3
FAN15G1714 Fragaria x ananassa HOM05D004164 ORTHO05D004891 5.9e-93 345.1 223 74.9
Nn4g25427 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.3e-92 344.0 330 54.5
Nn3g21861 Nelumbo nucifera HOM05D004164 ORTHO05D004891 6.5e-92 341.7 328 54.3
PSO832G1962 Papaver somniferum HOM05D004164 ORTHO05D004891 2.7e-90 336.3 330 53.9
PSO063G3797 Papaver somniferum HOM05D004164 ORTHO05D004891 4.0e-89 332.4 328 51.8
PSO832G0925 Papaver somniferum HOM05D004164 ORTHO05D004891 4.0e-89 332.4 330 54.2
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 2.6e-88 329.7 329 52.6
PSO210G6256 Papaver somniferum HOM05D004164 ORTHO05D004891 5.7e-88 328.6 328 52.4
Prupe.8G063800 Prunus persica HOM05D004164 ORTHO05D004891 5.7e-88 328.6 220 77.3
PSO507G0030 Papaver somniferum HOM05D004164 ORTHO05D004891 1.7e-87 327.0 331 52.6
PSO832G4194 Papaver somniferum HOM05D004164 ORTHO05D004891 3.7e-87 325.9 328 52.1
PSO173G0010 Papaver somniferum HOM05D004164 ORTHO05D004891 6.3e-87 325.1 328 50.9
PSO507G0017 Papaver somniferum HOM05D004164 ORTHO05D004891 1.4e-86 323.9 328 52.7
PSO761G0590 Papaver somniferum HOM05D004164 ORTHO05D004891 1.8e-86 323.6 328 51.2
PSO782G1386 Papaver somniferum HOM05D004164 ORTHO05D004891 5.4e-86 322.0 331 52.3
PSO210G5660 Papaver somniferum HOM05D004164 ORTHO05D004891 2.7e-85 319.7 328 51.2
PSO832G2156 Papaver somniferum HOM05D004164 ORTHO05D004891 2.7e-85 319.7 330 50.3
MBI18_g40410_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 4.3e-83 312.4 328 50.9
Haze_10597 Corylus avellana HOM05D004164 ORTHO05D004891 1.4e-78 297.4 233 64.4
PSO781G0333 Papaver somniferum HOM05D004164 ORTHO05D004891 1.2e-74 284.3 328 47.0
PSO761G0549 Papaver somniferum HOM05D004164 ORTHO05D004891 8.0e-74 281.6 329 47.4
PSO761G0410 Papaver somniferum HOM05D004164 ORTHO05D004891 8.3e-71 271.6 328 45.7
MBI18_g36466_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 1.6e-69 267.3 324 45.1
PSO173G0166 Papaver somniferum HOM05D004164 ORTHO05D004891 1.3e-63 247.7 264 49.2
Nitab4.5_0002401g0010 Nicotiana tabacum HOM05D004164 ORTHO05D004891 1.9e-62 243.8 148 78.4
PSO507G0015 Papaver somniferum HOM05D004164 ORTHO05D004891 1.9e-59 233.8 216 55.1
Actinidia26597 Actinidia chinensis HOM05D004164 ORTHO05D004891 1.4e-57 227.6 142 80.3
FAN24G1884 Fragaria x ananassa HOM05D004164 ORTHO05D004891 1.7e-55 220.7 178 66.9
FvH4_2g11900 Fragaria vesca HOM05D004164 ORTHO05D004891 6.4e-55 218.8 138 76.8
TPR.G9891 Trifolium pratense HOM05D004164 ORTHO05D004891 1.4e-49 201.1 173 64.7
MD05G1043700 Malus domestica HOM05D004164 ORTHO05D004891 1.3e-47 194.5 215 52.6
PSO541G2216 Papaver somniferum HOM05D004164 ORTHO05D004891 7.8e-45 185.3 194 50.0
Nn2g14913 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.9e-43 180.6 325 38.2
PSO646G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 4.3e-43 179.5 175 52.0
FvH4_2g11890 Fragaria vesca HOM05D004164 ORTHO05D004891 7.3e-43 178.7 136 66.9
FAN24G2526 Fragaria x ananassa HOM05D004164 ORTHO05D004891 4.8e-42 176.0 105 77.1
TPR.G11284 Trifolium pratense HOM05D004164 ORTHO05D004891 5.3e-41 172.6 129 66.7
TPR.G19821 Trifolium pratense HOM05D004164 ORTHO05D004891 3.6e-34 149.8 165 49.7
Pp3s30_626 Physcomitrium patens HOM05D004164 ORTHO05D004891 4.8e-34 149.4 371 31.3
PRCOL_00000119 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 1.1e-30 138.3 332 33.7
MD10G1050600 Malus domestica HOM05D004164 ORTHO05D004891 9.6e-27 125.2 293 31.7
Cfa026765 Carpinus fangiana HOM05D004164 ORTHO05D004891 2.1e-26 124.0 341 30.5
Prupe.8G063900 Prunus persica HOM05D004164 ORTHO05D004891 8.1e-26 122.1 79 70.9
Cfa023826 Carpinus fangiana HOM05D004164 ORTHO05D004891 4.0e-25 119.8 320 29.7
PSO400G0001 Papaver somniferum HOM05D004164 ORTHO05D004891 1.1e-19 101.7 98 51.0
TPR.G10092 Trifolium pratense HOM05D004164 ORTHO05D004891 2.5e-19 100.5 76 56.6
COL.COLO4_01173 Corchorus olitorius HOM05D004164 ORTHO05D004891 9.6e-19 98.6 293 30.0
Hma1.2p1_0784F.1_g217070 Hydrangea macrophylla HOM05D004164 ORTHO05D004891 6.3e-18 95.9 69 72.5
CSS0002492 Camellia sinensis var. sinensis HOM05D004164 ORTHO05D004891 1.1e-17 95.1 59 83.1
MCO10G397 Micromonas commoda HOM05D004164 ORTHO05D004891 1.4e-17 94.7 330 31.2
Cfa026889 Carpinus fangiana HOM05D004164 ORTHO05D004891 6.9e-17 92.4 362 27.3
Nn5g30063 Nelumbo nucifera HOM05D004164 ORTHO05D004891 1.2e-16 91.7 54 87.0
TAR019G0004 Trochodendron aralioides HOM05D004164 ORTHO05D004891 9.3e-14 82.0 51 78.4
MBI02_g02172_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 3.6e-13 80.1 45 77.8
TAR622G0536 Trochodendron aralioides HOM05D004164 ORTHO05D000005 3.6e-13 80.1 91 48.4
SGA_v2.0_scaffold72G24132 Striga asiatica HOM05D004164 ORTHO05D004891 5.1e-12 76.3 47 72.3
MBI18_g38521_MAGBIO Magnolia biondii HOM05D004164 ORTHO05D004891 8.7e-12 75.5 143 37.1
SGA_v2.0_scaffold47G17582 Striga asiatica HOM05D004164 ORTHO05D004891 9.7e-11 72.0 53 64.2
SGA_v2.0_scaffold48G17919 Striga asiatica HOM05D004164 ORTHO05D004891 2.2e-10 70.9 46 71.7
Zm00001eb051650 Zea mays HOM05D004164 ORTHO05D004891 1.4e-09 68.2 48 68.8
PRCOL_00002754 Prasinoderma coloniale HOM05D004164 ORTHO05D004891 2.0e-08 64.3 127 36.2


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