Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 2.1e-89 332.4 173 100.0
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 1.8e-37 159.8 173 54.3
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 8.5e-35 151.0 174 51.7
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 8.5e-35 151.0 135 65.2
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 1.9e-34 149.8 134 64.9
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 1.9e-34 149.8 135 64.4
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 1.9e-34 149.8 135 64.4
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 3.2e-34 149.1 134 64.2
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 4.2e-34 148.7 174 51.7
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 5.5e-34 148.3 135 64.4
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 5.5e-34 148.3 135 64.4
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 5.5e-34 148.3 135 63.7
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 7.2e-34 147.9 173 50.9
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 9.4e-34 147.5 169 53.3
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 9.4e-34 147.5 135 63.7
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 1.6e-33 146.7 174 51.1
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 2.7e-33 146.0 133 63.9
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 2.7e-33 146.0 134 63.4
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 3.6e-33 145.6 135 62.2
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 4.7e-33 145.2 169 52.7
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 4.7e-33 145.2 134 63.4
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 6.1e-33 144.8 134 63.4
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 1.0e-32 144.1 133 63.2
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 1.4e-32 143.7 134 60.4
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 1.4e-32 143.7 134 60.4
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 1.4e-32 143.7 175 50.9
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 1.8e-32 143.3 134 61.9
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 3.0e-32 142.5 134 61.2
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 3.0e-32 142.5 159 54.7
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 3.9e-32 142.1 134 61.2
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 3.9e-32 142.1 134 59.7
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 5.1e-32 141.7 141 58.9
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 6.7e-32 141.4 140 59.3
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 8.8e-32 141.0 126 61.1
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 1.1e-31 140.6 139 61.9
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 2.6e-31 139.4 130 59.2
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 2.6e-31 139.4 129 64.3
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 2.6e-31 139.4 129 61.2
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 4.4e-31 138.7 131 62.6
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 4.4e-31 138.7 139 58.3
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 5.7e-31 138.3 142 57.7
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 5.7e-31 138.3 172 50.0
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 5.7e-31 138.3 147 59.2
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 5.7e-31 138.3 138 58.7
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 1.3e-30 137.1 134 62.7
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.7e-30 136.7 138 58.0
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 2.2e-30 136.3 133 59.4
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 2.2e-30 136.3 134 59.7
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 2.8e-30 136.0 128 59.4
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 2.8e-30 136.0 124 62.9
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 4.8e-30 135.2 142 54.2
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 6.3e-30 134.8 139 56.1
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 6.3e-30 134.8 130 63.1
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 6.3e-30 134.8 142 57.0
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 8.2e-30 134.4 130 62.3
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 8.2e-30 134.4 142 57.0
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 1.1e-29 134.0 141 57.4
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 1.1e-29 134.0 135 57.0
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 1.1e-29 134.0 136 57.4
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 1.1e-29 134.0 124 61.3
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 1.8e-29 133.3 124 59.7
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 2.4e-29 132.9 124 60.5
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 4.1e-29 132.1 124 60.5
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 5.3e-29 131.7 124 60.5
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 5.3e-29 131.7 124 59.7
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 5.3e-29 131.7 124 59.7
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 5.3e-29 131.7 124 59.7
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 5.3e-29 131.7 135 58.5
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 5.3e-29 131.7 135 58.5
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 5.3e-29 131.7 193 49.2
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 7.0e-29 131.3 141 52.5
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 7.0e-29 131.3 141 53.9
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 9.1e-29 131.0 124 58.9
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 9.1e-29 131.0 124 59.7
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 9.1e-29 131.0 136 58.1
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 1.2e-28 130.6 124 59.7
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 1.2e-28 130.6 124 58.9
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 1.2e-28 130.6 124 61.3
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 1.2e-28 130.6 181 48.1
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 1.2e-28 130.6 140 59.3
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 1.5e-28 130.2 124 59.7
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 2.0e-28 129.8 174 48.9
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 2.0e-28 129.8 200 46.0
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 2.6e-28 129.4 139 56.1
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 4.5e-28 128.6 137 57.7
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 5.9e-28 128.3 121 58.7
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 5.9e-28 128.3 127 60.6
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 7.7e-28 127.9 136 55.9
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 1.0e-27 127.5 134 59.0
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 1.3e-27 127.1 137 57.7
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 1.3e-27 127.1 180 50.6
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 1.3e-27 127.1 180 50.6
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 1.3e-27 127.1 137 55.5
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 2.2e-27 126.3 122 59.0
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 2.9e-27 125.9 125 58.4
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 3.8e-27 125.6 66 92.4
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 5.0e-27 125.2 128 56.2
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 6.5e-27 124.8 121 57.9
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 8.5e-27 124.4 122 59.0
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 8.5e-27 124.4 123 60.2
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 1.1e-26 124.0 122 59.0
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 1.5e-26 123.6 162 50.0
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 2.5e-26 122.9 138 55.1
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 2.5e-26 122.9 131 55.0
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 3.2e-26 122.5 122 58.2
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 4.2e-26 122.1 137 54.0
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 1.0e-24 117.5 140 51.4
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 3.3e-23 112.5 139 48.2
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 5.7e-23 111.7 120 53.3
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 5.7e-23 111.7 128 54.7
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 2.8e-22 109.4 121 54.5
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 1.4e-21 107.1 139 46.8
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 4.1e-21 105.5 71 73.2
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 7.7e-20 101.3 124 53.2
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 2.9e-19 99.4 131 47.3
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 1.5e-18 97.1 115 55.7
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 1.9e-18 96.7 122 49.2
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 4.0e-16 89.0 128 49.2
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 1.5e-15 87.0 121 46.3
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 4.1e-13 79.0 89 51.7
CBR_g47116 Chara braunii HOM05D005104 ORTHO05D006614 4.9e-06 55.5 151 32.5


User provided reference genes

Program Settings