Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc08g0002720 Simmondsia chinensis HOM05D007350 ORTHO05D009323 1.4e-125 453.0 232 100.0
Hund16245 Selenicereus undatus HOM05D007350 ORTHO05D009323 2.9e-30 136.3 115 61.7
Actinidia20526 Actinidia chinensis HOM05D007350 ORTHO05D009323 3.8e-30 136.0 142 54.2
Actinidia18040 Actinidia chinensis HOM05D007350 ORTHO05D009323 1.1e-29 134.4 146 54.8
AUR62013001 Chenopodium quinoa HOM05D007350 ORTHO05D009323 7.1e-29 131.7 131 55.0
AUR62010011 Chenopodium quinoa HOM05D007350 ORTHO05D009323 1.3e-27 127.5 95 71.6
Hma1.2p1_0032F.1_g019200 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 5.1e-27 125.6 95 70.5
Ciclev10029452m.g Citrus clementina HOM05D007350 ORTHO05D009323 6.7e-27 125.2 122 58.2
ClCG02G003950 Citrullus lanatus HOM05D007350 ORTHO05D009323 1.5e-26 124.0 143 53.8
Nn4g24553 Nelumbo nucifera HOM05D007350 ORTHO05D009323 4.3e-26 122.5 147 53.1
Haze_02104 Corylus avellana HOM05D007350 ORTHO05D009323 5.7e-26 122.1 169 47.3
MELO3C013337.2 Cucumis melo HOM05D007350 ORTHO05D009323 9.7e-26 121.3 93 69.9
FAN27G1653 Fragaria x ananassa HOM05D007350 ORTHO05D009323 9.7e-26 121.3 112 60.7
FvH4_2g15660 Fragaria vesca HOM05D007350 ORTHO05D009323 2.8e-25 119.8 161 46.6
FAN24G2045 Fragaria x ananassa HOM05D007350 ORTHO05D009323 6.3e-25 118.6 134 52.2
Migut.B01238 Erythranthe guttata HOM05D007350 ORTHO05D009323 8.2e-25 118.2 112 60.7
FAN15G0854 Fragaria x ananassa HOM05D007350 ORTHO05D009323 8.2e-25 118.2 134 52.2
Prupe.8G169100 Prunus persica HOM05D007350 ORTHO05D009323 8.2e-25 118.2 95 67.4
QL11p052353 Quercus lobata HOM05D007350 ORTHO05D009323 8.2e-25 118.2 165 49.1
Rhsim03G0180300 Rhododendron simsii HOM05D007350 ORTHO05D009323 8.2e-25 118.2 148 50.0
Thecc.02G055300 Theobroma cacao HOM05D007350 ORTHO05D009323 8.2e-25 118.2 97 62.9
CsaV3_7G001160 Cucumis sativus L. HOM05D007350 ORTHO05D009323 1.1e-24 117.9 143 53.1
Sed0025246 Sechium edule HOM05D007350 ORTHO05D009323 1.1e-24 117.9 145 51.0
RcHm_v2.0_Chr6g0278921 Rosa chinensis HOM05D007350 ORTHO05D009323 1.4e-24 117.5 178 42.7
MBI19_g01918_MAGBIO Magnolia biondii HOM05D007350 ORTHO05D009323 1.8e-24 117.1 174 47.7
MD10G1127900 Malus domestica HOM05D007350 ORTHO05D009323 2.4e-24 116.7 95 65.3
GSVIVG01023973001 Vitis vinifera HOM05D007350 ORTHO05D009323 2.4e-24 116.7 118 55.1
Lalb_Chr02g0159761 Lupinus albus HOM05D007350 ORTHO05D009323 3.1e-24 116.3 159 47.2
Eucgr.G01372 Eucalyptus grandis HOM05D007350 ORTHO05D009323 4.1e-24 115.9 163 45.4
TWI79G1045 Tripterygium wilfordii HOM05D007350 ORTHO05D009323 5.3e-24 115.5 149 49.0
PSO063G0872 Papaver somniferum HOM05D007350 ORTHO05D009323 1.2e-23 114.4 131 51.9
PSO782G4816 Papaver somniferum HOM05D007350 ORTHO05D009323 1.2e-23 114.4 131 51.9
Cpa.g.sc20.115 Carica papaya HOM05D007350 ORTHO05D009323 1.5e-23 114.0 168 45.2
COL.COLO4_17379 Corchorus olitorius HOM05D007350 ORTHO05D009323 1.5e-23 114.0 85 68.2
RcHm_v2.0_Chr6g0278901 Rosa chinensis HOM05D007350 ORTHO05D009323 1.5e-23 114.0 133 50.4
Oeu025102.1 Olea europaea HOM05D007350 ORTHO05D009323 2.6e-23 113.2 167 46.1
TAR374G1157 Trochodendron aralioides HOM05D007350 ORTHO05D009323 2.6e-23 113.2 101 60.4
Glyma.19G012500 Glycine max HOM05D007350 ORTHO05D009323 3.4e-23 112.8 154 44.8
Cc09_g10330 Coffea canephora HOM05D007350 ORTHO05D009323 4.5e-23 112.5 93 64.5
MSTRG.20506 Avicennia marina HOM05D007350 ORTHO05D009323 1.0e-22 111.3 166 48.8
Gohir.A03G205900 Gossypium hirsutum HOM05D007350 ORTHO05D009323 1.0e-22 111.3 96 62.5
Gohir.D02G227300 Gossypium hirsutum HOM05D007350 ORTHO05D009323 1.0e-22 111.3 96 62.5
Gorai.005G255200 Gossypium raimondii HOM05D007350 ORTHO05D009323 1.0e-22 111.3 96 62.5
Sabra04G0119700 Salix brachista HOM05D007350 ORTHO05D009323 1.0e-22 111.3 91 65.9
Aqoxy3G04007 Aquilegia oxysepala HOM05D007350 ORTHO05D009323 1.3e-22 110.9 97 61.9
CiPaw.05G085400 Carya illinoinensis HOM05D007350 ORTHO05D009323 1.7e-22 110.5 122 51.6
Duzib052G1005 Durio zibethinus HOM05D007350 ORTHO05D009323 2.2e-22 110.2 141 47.5
Medtr6g007793 Medicago truncatula HOM05D007350 ORTHO05D009323 2.2e-22 110.2 158 44.9
Lj2g0024385 Lotus japonicus HOM05D007350 ORTHO05D009323 3.8e-22 109.4 155 45.8
Potri.004G177800 Populus trichocarpa HOM05D007350 ORTHO05D009323 5.0e-22 109.0 173 45.7
Glyma.13G070400 Glycine max HOM05D007350 ORTHO05D009323 6.5e-22 108.6 154 43.5
Manes.04G071000 Manihot esculenta HOM05D007350 ORTHO05D009323 6.5e-22 108.6 98 61.2
Psat1g060320 Pisum sativum HOM05D007350 ORTHO05D009323 1.9e-21 107.1 158 44.9
Thhalv10026464m.g Eutrema salsugineum HOM05D007350 ORTHO05D009323 2.5e-21 106.7 97 59.8
SGA_v2.0_scaffold124G33608 Striga asiatica HOM05D007350 ORTHO05D009323 2.5e-21 106.7 92 68.5
TPR.G2262 Trifolium pratense HOM05D007350 ORTHO05D009323 3.2e-21 106.3 156 44.9
CDE05G3477 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 4.2e-21 105.9 83 66.3
Nitab4.5_0005221g0020 Nicotiana tabacum HOM05D007350 ORTHO05D009323 7.2e-21 105.1 92 62.0
Phvul.004G019500 Phaseolus vulgaris HOM05D007350 ORTHO05D009323 7.2e-21 105.1 154 45.5
arahy.Tifrunner.gnm1.ann1.7M0RFB Arachis hypogaea HOM05D007350 ORTHO05D009323 2.1e-20 103.6 156 44.9
CAN.G112.14 Capsicum annuum HOM05D007350 ORTHO05D009323 2.7e-20 103.2 134 48.5
Ca_04216_v3 Cicer arietinum L. HOM05D007350 ORTHO05D009323 2.7e-20 103.2 119 49.6
Lsat_1_v5_gn_4_72021 Lactuca sativa HOM05D007350 ORTHO05D009323 2.7e-20 103.2 99 61.6
Solyc05g050720.4 Solanum lycopersicum HOM05D007350 ORTHO05D009323 2.7e-20 103.2 164 44.5
Nitab4.5_0002598g0070 Nicotiana tabacum HOM05D007350 ORTHO05D009323 4.6e-20 102.4 140 46.4
PGR042G2321 Punica granatum HOM05D007350 ORTHO05D009323 6.1e-20 102.1 151 45.0
VMungo0464G1538 Vigna mungo HOM05D007350 ORTHO05D009323 6.1e-20 102.1 145 44.1
CANSAT78G0569 Cannabis sativa HOM05D007350 ORTHO05D009323 7.9e-20 101.7 83 68.7
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 1.4e-19 100.9 97 54.6
THA.LOC104807801 Tarenaya hassleriana HOM05D007350 ORTHO05D009323 1.4e-19 100.9 91 57.1
Sopen05g029130 Solanum pennellii HOM05D007350 ORTHO05D009323 1.8e-19 100.5 138 46.4
ATR0598G093 Amborella trichopoda HOM05D007350 ORTHO05D009323 3.0e-19 99.8 95 54.7
Carub.0007s0037 Capsella rubella HOM05D007350 ORTHO05D009323 3.0e-19 99.8 91 59.3
Sp7g37290 Schrenkiella parvula HOM05D007350 ORTHO05D009323 3.0e-19 99.8 132 46.2
AL7G10350 Arabidopsis lyrata HOM05D007350 ORTHO05D009323 8.8e-19 98.2 106 52.8
Hma1.2p1_0032F.1_g019210 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 2.5e-18 96.7 65 81.5
BcaC01g00233 Brassica carinata HOM05D007350 ORTHO05D009323 4.3e-18 95.9 98 56.1
AT4G38490 Arabidopsis thaliana HOM05D007350 ORTHO05D009323 5.7e-18 95.5 107 50.5
CARHR294210 Cardamine hirsuta HOM05D007350 ORTHO05D009323 5.7e-18 95.5 97 54.6
ECA234G1892 Erigeron canadensis HOM05D007350 ORTHO05D009323 5.7e-18 95.5 89 60.7
HanXRQChr10g0298081 Helianthus annuus HOM05D007350 ORTHO05D009323 5.7e-18 95.5 122 48.4
Atru.chr5.3441 Acer truncatum HOM05D007350 ORTHO05D009323 7.4e-18 95.1 77 64.9
A08p24200 Brassica napus HOM05D007350 ORTHO05D009323 7.4e-18 95.1 84 61.9
BolC3t19964H Brassica oleracea HOM05D007350 ORTHO05D009323 7.4e-18 95.1 77 63.6
C03p77120 Brassica napus HOM05D007350 ORTHO05D009323 2.2e-17 93.6 77 62.3
BraA08t34374Z Brassica rapa HOM05D007350 ORTHO05D009323 3.7e-17 92.8 84 61.9
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 1.1e-16 91.3 93 59.1
Atru.chr6.83 Acer truncatum HOM05D007350 ORTHO05D009323 1.4e-16 90.9 125 45.6
Dinv09314 Davidia involucrata HOM05D007350 ORTHO05D009323 2.4e-16 90.1 136 42.6
BcaC01g00225 Brassica carinata HOM05D007350 ORTHO05D009323 3.1e-16 89.7 81 59.3
CDE11G0403 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 1.2e-15 87.8 67 71.6
CSS0005535 Camellia sinensis var. sinensis HOM05D007350 ORTHO05D009323 7.7e-15 85.1 126 42.9
Os09g0450200 Oryza sativa ssp. japonica HOM05D007350 ORTHO05D009323 8.5e-14 81.6 71 56.3
MD10G1128000 Malus domestica HOM05D007350 ORTHO05D009323 1.9e-13 80.5 54 81.5
SalBow5G3345 Salvia bowleyana HOM05D007350 ORTHO05D009323 1.1e-10 71.2 61 52.5
RcHm_v2.0_Chr6g0278961 Rosa chinensis HOM05D007350 ORTHO05D009323 5.7e-10 68.9 67 49.3
Pp3c6_16710 Physcomitrium patens HOM05D007350 ORTHO05D009323 9.7e-10 68.2 79 46.8
SEGI_00987 Sequoiadendron giganteum HOM05D007350 ORTHO05D009323 1.4e-08 64.3 154 33.1
PGSC0003DMG400006999 Solanum tuberosum HOM05D007350 ORTHO05D009323 1.4e-08 64.3 103 39.8
HPP92_012658 Vanilla planifolia HOM05D007350 ORTHO05D009323 5.3e-08 62.4 59 50.8
DCAR_004401 Daucus carota HOM05D000250 ORTHO05D000625 1.2e-07 61.2 61 47.5
Mapoly0060s0112 Marchantia polymorpha HOM05D007350 ORTHO05D009323 1.0e-06 58.2 74 40.5


User provided reference genes

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