Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0010050 Simmondsia chinensis HOM05D006578 ORTHO05D008100 1.1e-86 323.6 194 100.0
Dinv37530 Davidia involucrata HOM05D006578 ORTHO05D008100 1.2e-26 124.0 132 52.3
Hma1.2p1_0359F.1_g135230 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 3.4e-24 115.9 152 46.7
EL10Ac5g12919 Beta vulgaris HOM05D006578 ORTHO05D008100 7.6e-24 114.8 175 42.9
Thecc.03G298500 Theobroma cacao HOM05D006578 ORTHO05D008100 7.6e-24 114.8 151 45.0
CSS0036002 Camellia sinensis var. sinensis HOM05D006578 ORTHO05D008100 3.8e-23 112.5 149 53.7
TAR633G0540 Trochodendron aralioides HOM05D006578 ORTHO05D008100 3.8e-23 112.5 132 47.7
Potri.003G140400 Populus trichocarpa HOM05D006578 ORTHO05D008100 4.9e-23 112.1 137 48.9
Sabra01G0067600 Salix brachista HOM05D006578 ORTHO05D008100 1.1e-22 110.9 146 46.6
COL.COLO4_10707 Corchorus olitorius HOM05D006578 ORTHO05D008100 3.2e-22 109.4 139 48.2
GSVIVG01019536001 Vitis vinifera HOM05D006578 ORTHO05D008100 3.2e-22 109.4 150 44.0
Gohir.A05G346600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 5.4e-22 108.6 150 46.0
Potri.001G091300 Populus trichocarpa HOM05D006578 ORTHO05D008100 5.4e-22 108.6 150 48.0
Cc08_g16100 Coffea canephora HOM05D006578 ORTHO05D008100 1.2e-21 107.5 144 45.8
Lsat_1_v5_gn_3_10861 Lactuca sativa HOM05D006578 ORTHO05D008100 2.7e-21 106.3 129 56.6
Oeu009960.1 Olea europaea HOM05D006578 ORTHO05D008100 2.7e-21 106.3 130 47.7
Nitab4.5_0006775g0020 Nicotiana tabacum HOM05D006578 ORTHO05D008100 3.5e-21 105.9 166 48.2
Manes.02G009600 Manihot esculenta HOM05D006578 ORTHO05D008100 6.0e-21 105.1 156 44.2
CAN.G1804.8 Capsicum annuum HOM05D006578 ORTHO05D008100 7.8e-21 104.8 170 51.8
Duzib068G0825 Durio zibethinus HOM05D006578 ORTHO05D008100 7.8e-21 104.8 151 44.4
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 1.7e-20 103.6 185 39.5
PGSC0003DMG400044958 Solanum tuberosum HOM05D006578 ORTHO05D008100 1.7e-20 103.6 168 49.4
Ca_18845_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 3.9e-20 102.4 130 43.8
Atru.chr9.1977 Acer truncatum HOM05D006578 ORTHO05D008100 5.1e-20 102.1 129 45.7
Atru.chr9.1992 Acer truncatum HOM05D006578 ORTHO05D008100 5.1e-20 102.1 129 45.7
Nitab4.5_0001210g0110 Nicotiana tabacum HOM05D006578 ORTHO05D008100 6.6e-20 101.7 166 52.4
Sopen08g030660 Solanum pennellii HOM05D006578 ORTHO05D008100 6.6e-20 101.7 168 44.6
AT4G23890 Arabidopsis thaliana HOM05D006578 ORTHO05D008100 8.6e-20 101.3 152 39.5
Cpa.g.sc79.32 Carica papaya HOM05D006578 ORTHO05D008100 8.6e-20 101.3 95 51.6
TWI81G0713 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 8.6e-20 101.3 134 44.0
DCAR_029888 Daucus carota HOM05D006578 ORTHO05D008100 1.1e-19 100.9 151 41.1
Medtr8g032260 Medicago truncatula HOM05D006578 ORTHO05D008100 1.1e-19 100.9 134 42.5
MSTRG.11922 Avicennia marina HOM05D006578 ORTHO05D008100 1.5e-19 100.5 147 42.2
Solyc08g082400.1 Solanum lycopersicum HOM05D006578 ORTHO05D008100 1.5e-19 100.5 145 49.7
Glyma.09G263100 Glycine max HOM05D006578 ORTHO05D008100 1.9e-19 100.1 140 49.3
Lj3g0025915 Lotus japonicus HOM05D006578 ORTHO05D008100 2.5e-19 99.8 129 42.6
THA.LOC104815081 Tarenaya hassleriana HOM05D006578 ORTHO05D008100 2.5e-19 99.8 144 38.2
HanXRQChr17g0534801 Helianthus annuus HOM05D006578 ORTHO05D008100 4.3e-19 99.0 128 57.0
Sed0010985 Sechium edule HOM05D006578 ORTHO05D008100 4.3e-19 99.0 125 43.2
BraA01t01458Z Brassica rapa HOM05D006578 ORTHO05D008100 5.6e-19 98.6 132 39.4
Medtr7g076620 Medicago truncatula HOM05D006578 ORTHO05D008100 5.6e-19 98.6 149 36.2
PGR042G0620 Punica granatum HOM05D006578 ORTHO05D008100 5.6e-19 98.6 133 45.9
Actinidia27316 Actinidia chinensis HOM05D006578 ORTHO05D008100 7.3e-19 98.2 103 48.5
Phvul.008G068900 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 7.3e-19 98.2 135 54.1
CARHR231290 Cardamine hirsuta HOM05D006578 ORTHO05D008100 1.2e-18 97.4 126 42.9
Cfa012002 Carpinus fangiana HOM05D006578 ORTHO05D008100 1.6e-18 97.1 148 46.6
Prupe.5G120500 Prunus persica HOM05D006578 ORTHO05D008100 1.6e-18 97.1 153 45.8
Ciclev10024562m.g Citrus clementina HOM05D006578 ORTHO05D008100 2.1e-18 96.7 150 40.0
Migut.A00640 Erythranthe guttata HOM05D006578 ORTHO05D008100 2.1e-18 96.7 128 45.3
CsaV3_4G006610 Cucumis sativus L. HOM05D006578 ORTHO05D008100 2.8e-18 96.3 175 38.3
Sp7g21850 Schrenkiella parvula HOM05D006578 ORTHO05D008100 2.8e-18 96.3 124 41.1
Peaxi162Scf00074g00082 Petunia axillaris HOM05D006578 ORTHO05D008100 3.6e-18 95.9 165 37.0
TWI60G1670 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 6.2e-18 95.1 148 39.2
CiPaw.11G120900 Carya illinoinensis HOM05D006578 ORTHO05D008100 8.1e-18 94.7 114 47.4
MELO3C016296.2 Cucumis melo HOM05D006578 ORTHO05D008100 8.1e-18 94.7 174 37.9
BcaNung01096 Brassica carinata HOM05D006578 ORTHO05D008100 1.1e-17 94.4 155 36.1
Lj1g0003243 Lotus japonicus HOM05D006578 ORTHO05D008100 1.1e-17 94.4 129 49.6
Phvul.010G094000 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 1.1e-17 94.4 129 42.6
TPR.G17579 Trifolium pratense HOM05D006578 ORTHO05D008100 1.1e-17 94.4 128 39.1
VMungo1383G2377 Vigna mungo HOM05D006578 ORTHO05D008100 1.1e-17 94.4 127 52.0
ATR0796G340 Amborella trichopoda HOM05D006578 ORTHO05D008100 1.4e-17 94.0 149 40.3
arahy.Tifrunner.gnm1.ann1.6WXN94 Arachis hypogaea HOM05D006578 ORTHO05D008100 1.4e-17 94.0 128 46.9
arahy.Tifrunner.gnm1.ann1.UYM9MT Arachis hypogaea HOM05D006578 ORTHO05D008100 1.4e-17 94.0 128 53.1
CiPaw.12G082500 Carya illinoinensis HOM05D006578 ORTHO05D008100 1.4e-17 94.0 157 38.9
FvH4_5g04650 Fragaria vesca HOM05D006578 ORTHO05D008100 1.4e-17 94.0 195 37.9
A01p15200 Brassica napus HOM05D006578 ORTHO05D008100 1.8e-17 93.6 129 39.5
PSO761G0627 Papaver somniferum HOM05D006578 ORTHO05D008100 1.8e-17 93.6 166 48.8
Aa31LG6G7150 Aethionema arabicum HOM05D006578 ORTHO05D008100 2.4e-17 93.2 129 38.8
C01p19130 Brassica napus HOM05D006578 ORTHO05D008100 2.4e-17 93.2 130 38.5
BolC1t01839H Brassica oleracea HOM05D006578 ORTHO05D008100 2.4e-17 93.2 130 38.5
HPP92_001215 Vanilla planifolia HOM05D006578 ORTHO05D008100 2.4e-17 93.2 110 45.5
Carub.0007s1722 Capsella rubella HOM05D006578 ORTHO05D008100 3.1e-17 92.8 127 39.4
Glyma.07G075100 Glycine max HOM05D006578 ORTHO05D008100 3.1e-17 92.8 151 39.1
unitig_32.g10973 Utricularia gibba HOM05D006578 ORTHO05D008100 4.0e-17 92.4 151 39.7
AUR62010844 Chenopodium quinoa HOM05D006578 ORTHO05D008100 5.2e-17 92.0 168 39.3
FAN18G0518 Fragaria x ananassa HOM05D006578 ORTHO05D008100 5.2e-17 92.0 151 40.4
FAN18G3822 Fragaria x ananassa HOM05D006578 ORTHO05D008100 5.2e-17 92.0 151 40.4
BcaNung04080 Brassica carinata HOM05D006578 ORTHO05D008100 6.9e-17 91.7 153 35.9
FAN08G0426 Fragaria x ananassa HOM05D006578 ORTHO05D008100 6.9e-17 91.7 128 43.0
BcaNung04242 Brassica carinata HOM05D006578 ORTHO05D008100 8.9e-17 91.3 155 36.8
C07p53190 Brassica napus HOM05D006578 ORTHO05D008100 8.9e-17 91.3 155 36.8
BolC7t45814H Brassica oleracea HOM05D006578 ORTHO05D008100 8.9e-17 91.3 155 36.8
Os07g0196200 Oryza sativa ssp. japonica HOM05D006578 ORTHO05D008100 1.2e-16 90.9 119 55.5
Thhalv10027518m.g Eutrema salsugineum HOM05D006578 ORTHO05D008100 2.0e-16 90.1 134 40.3
Psat3g111760 Pisum sativum HOM05D006578 ORTHO05D008100 2.0e-16 90.1 153 39.9
VMungo0331G0206 Vigna mungo HOM05D005332 ORTHO05D006861 2.0e-16 90.1 175 34.9
Ca_07882_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 2.6e-16 89.7 117 37.6
Lalb_Chr04g0256691 Lupinus albus HOM05D006578 ORTHO05D008100 2.6e-16 89.7 159 53.5
AL7G29450 Arabidopsis lyrata HOM05D006578 ORTHO05D008100 3.4e-16 89.4 152 35.5
FAN04G1820 Fragaria x ananassa HOM05D006578 ORTHO05D008100 3.4e-16 89.4 128 42.2
FAN13G1942 Fragaria x ananassa HOM05D006578 ORTHO05D008100 3.4e-16 89.4 128 42.2
BcaC09g50934 Brassica carinata HOM05D006578 ORTHO05D008100 5.8e-16 88.6 90 48.9
Aqoxy2G01516 Aquilegia oxysepala HOM05D006578 ORTHO05D008100 7.6e-16 88.2 131 57.3
BraA03t14550Z Brassica rapa HOM05D006578 ORTHO05D008100 7.6e-16 88.2 154 41.6
A03p54830 Brassica napus HOM05D006578 ORTHO05D008100 1.3e-15 87.4 156 44.2
ClCG07G011600 Citrullus lanatus HOM05D006578 ORTHO05D008100 1.3e-15 87.4 170 38.2
PSO210G4984 Papaver somniferum HOM05D006578 ORTHO05D008100 1.3e-15 87.4 159 50.3
Glyma.18G229100 Glycine max HOM05D006578 ORTHO05D008100 2.2e-15 86.7 140 52.9
SGA_v2.0_scaffold96G29015 Striga asiatica HOM05D003962 ORTHO05D004714 3.8e-15 85.9 177 36.7
ECA246G0449 Erigeron canadensis HOM05D001832 ORTHO05D001861 4.9e-15 85.5 178 46.1
Lj2P167T19 Lonicera japonica HOM05D006578 ORTHO05D008100 6.4e-15 85.1 85 51.8
Zm00001eb224490 Zea mays HOM05D006578 ORTHO05D008100 1.1e-14 84.3 119 39.5
QL02p030348 Quercus lobata HOM05D006578 ORTHO05D008100 3.2e-14 82.8 106 44.3
SEGI_09764 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 7.1e-14 81.6 114 43.9
SEGI_13573 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 1.2e-13 80.9 163 37.4
Sabra03G0101400 Salix brachista HOM05D006578 ORTHO05D008100 2.1e-13 80.1 127 40.9
Gorai.012G073800 Gossypium raimondii HOM05D006578 ORTHO05D008100 3.5e-13 79.3 142 37.3
Haze_09067 Corylus avellana HOM05D006578 ORTHO05D008100 6.0e-13 78.6 106 41.5
Gohir.D04G065600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 1.7e-12 77.0 142 36.6
Nn4g25270 Nelumbo nucifera HOM05D006578 ORTHO05D008100 3.3e-11 72.8 116 42.2
Glyma.03G015000 Glycine max HOM05D006578 ORTHO05D008100 1.6e-10 70.5 122 37.7
Pp3c11_19730 Physcomitrium patens HOM05D006578 ORTHO05D008100 6.2e-10 68.6 175 30.3
AagrBONN_evm.TU.Sc2ySwM_117.36 Anthoceros agrestis HOM05D006578 ORTHO05D008100 2.4e-09 66.6 186 32.8
Sabra15G0075700 Salix brachista HOM05D000345 ORTHO05D000215 2.4e-09 66.6 42 76.2
Hma1.2p1_0359F.1_g135240 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 5.3e-09 65.5 54 59.3
SalBow1G4365 Salvia bowleyana HOM05D006578 ORTHO05D008100 5.3e-09 65.5 114 46.5
SalBow1G5827 Salvia bowleyana HOM05D006578 ORTHO05D008100 5.3e-09 65.5 114 46.5
Psat4g152960 Pisum sativum HOM05D006578 ORTHO05D008100 9.9e-08 61.2 147 30.6
AUR62019843 Chenopodium quinoa HOM05D006578 ORTHO05D008100 2.2e-07 60.1 168 38.7
Mapoly0067s0043 Marchantia polymorpha HOM05D006578 ORTHO05D008100 3.8e-07 59.3 97 36.1
Sabra10G0172600 Salix brachista HOM05D006578 ORTHO05D008100 9.3e-06 54.7 28 85.7


User provided reference genes

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