Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0009440 Simmondsia chinensis HOM05D004508 ORTHO05D005180 7.3e-239 830.1 403 100.0
Nitab4.5_0003534g0110 Nicotiana tabacum HOM05D004508 ORTHO05D005180 1.0e-163 580.5 401 69.8
EL10Ac5g12616 Beta vulgaris HOM05D004508 ORTHO05D005180 1.3e-163 580.1 395 71.4
Dinv37763 Davidia involucrata HOM05D004508 ORTHO05D005180 3.2e-162 575.5 404 69.1
Hund14651 Selenicereus undatus HOM05D004508 ORTHO05D005180 4.2e-162 575.1 385 72.5
Nitab4.5_0005465g0020 Nicotiana tabacum HOM05D004508 ORTHO05D005180 4.0e-160 568.5 401 68.6
Nitab4.5_0007591g0010 Nicotiana tabacum HOM05D004508 ORTHO05D005180 2.8e-158 562.4 401 67.8
Solyc08g079470.3 Solanum lycopersicum HOM05D004508 ORTHO05D005180 4.9e-158 561.6 402 67.9
Hma1.2p1_1654F.1_g295900 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 1.4e-157 560.1 409 66.5
Manes.01G073700 Manihot esculenta HOM05D004508 ORTHO05D005180 1.4e-157 560.1 401 68.6
Ah.12g058230 Amaranthus hybridus HOM05D004508 ORTHO05D005180 2.4e-157 559.3 395 66.6
Hma1.2p1_0108F.1_g051860 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 2.0e-156 556.2 381 70.3
CiPaw.11G147500 Carya illinoinensis HOM05D004508 ORTHO05D005180 2.3e-155 552.7 399 67.7
Eucgr.D01989 Eucalyptus grandis HOM05D004508 ORTHO05D005180 1.1e-154 550.4 405 65.4
Rhsim07G0101600 Rhododendron simsii HOM05D004508 ORTHO05D005180 2.5e-154 549.3 404 66.6
Thecc.03G261800 Theobroma cacao HOM05D004508 ORTHO05D005180 1.6e-153 546.6 389 66.8
CSS0042805 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 2.1e-153 546.2 414 66.9
Sopen08g027840 Solanum pennellii HOM05D004508 ORTHO05D005180 2.1e-153 546.2 366 71.0
PGSC0003DMG400003935 Solanum tuberosum HOM05D004508 ORTHO05D005180 4.7e-153 545.0 366 70.8
Lj8C255T7 Lonicera japonica HOM05D004508 ORTHO05D005180 8.0e-153 544.3 391 67.0
Actinidia27434 Actinidia chinensis HOM05D004508 ORTHO05D005180 1.8e-152 543.1 380 68.2
Cpa.g.sc29.91 Carica papaya HOM05D004508 ORTHO05D005180 1.5e-151 540.0 403 65.8
QL12p014971 Quercus lobata HOM05D004508 ORTHO05D005180 1.5e-151 540.0 397 66.8
Ciclev10020216m.g Citrus clementina HOM05D004508 ORTHO05D005180 5.7e-151 538.1 431 62.4
FvH4_5g00670 Fragaria vesca HOM05D004508 ORTHO05D005180 5.7e-151 538.1 403 65.5
FAN08G3098 Fragaria x ananassa HOM05D004508 ORTHO05D005180 7.5e-151 537.7 404 65.6
Gohir.D12G223300 Gossypium hirsutum HOM05D004508 ORTHO05D005180 7.5e-151 537.7 372 68.8
Atru.chr9.1431 Acer truncatum HOM05D004508 ORTHO05D005180 1.3e-150 537.0 398 66.1
CAN.G630.82 Capsicum annuum HOM05D004508 ORTHO05D005180 1.3e-150 537.0 401 65.1
Gorai.008G239600 Gossypium raimondii HOM05D004508 ORTHO05D005180 1.3e-150 537.0 372 68.8
Duzib205G1463 Durio zibethinus HOM05D004508 ORTHO05D005180 2.2e-150 536.2 373 68.6
Gohir.A12G221000 Gossypium hirsutum HOM05D004508 ORTHO05D005180 2.2e-150 536.2 372 68.5
Peaxi162Scf00271g00023 Petunia axillaris HOM05D004508 ORTHO05D005180 3.7e-150 535.4 376 69.4
FAN18G1402 Fragaria x ananassa HOM05D004508 ORTHO05D005180 4.9e-150 535.0 403 65.3
CANSAT21G2188 Cannabis sativa HOM05D004508 ORTHO05D005180 6.4e-150 534.6 372 68.3
Haze_02980 Corylus avellana HOM05D004508 ORTHO05D005180 1.1e-149 533.9 424 64.6
Prupe.5G079500 Prunus persica HOM05D004508 ORTHO05D005180 1.1e-149 533.9 400 67.0
vmacro14042 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 1.8e-149 533.1 387 67.4
FAN13G3174 Fragaria x ananassa HOM05D004508 ORTHO05D005180 3.2e-149 532.3 403 64.8
Sp6g05370 Schrenkiella parvula HOM05D004508 ORTHO05D005180 3.2e-149 532.3 382 67.5
RcHm_v2.0_Chr4g0419741 Rosa chinensis HOM05D004508 ORTHO05D005180 4.1e-149 531.9 399 66.9
FAN04G0404 Fragaria x ananassa HOM05D004508 ORTHO05D005180 9.2e-149 530.8 398 65.6
RcHm_v2.0_Chr7g0201591 Rosa chinensis HOM05D004508 ORTHO05D005180 1.2e-148 530.4 399 66.7
BolC9t56277H Brassica oleracea HOM05D004508 ORTHO05D005180 1.6e-148 530.0 408 65.4
BcaC04g21205 Brassica carinata HOM05D004508 ORTHO05D005180 2.7e-148 529.3 407 65.6
C09p34340 Brassica napus HOM05D004508 ORTHO05D005180 2.7e-148 529.3 407 65.6
SGA_v2.0_scaffold25G11118 Striga asiatica HOM05D004508 ORTHO05D005180 4.6e-148 528.5 376 68.1
TAR374G1167 Trochodendron aralioides HOM05D004508 ORTHO05D005180 7.8e-148 527.7 368 70.1
BcaB01g01727 Brassica carinata HOM05D004508 ORTHO05D005180 1.3e-147 526.9 379 67.3
CARHR254050 Cardamine hirsuta HOM05D004508 ORTHO05D005180 1.7e-147 526.6 406 64.5
SGA_v2.0_scaffold146G36178 Striga asiatica HOM05D004508 ORTHO05D005180 1.7e-147 526.6 376 68.4
CSS0027133 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 2.3e-147 526.2 372 69.9
HanXRQChr17g0549071 Helianthus annuus HOM05D004508 ORTHO05D005180 3.9e-147 525.4 382 67.0
Lsat_1_v5_gn_3_3920 Lactuca sativa HOM05D004508 ORTHO05D005180 3.9e-147 525.4 383 66.8
Potri.001G117700 Populus trichocarpa HOM05D004508 ORTHO05D005180 5.0e-147 525.0 386 66.6
ClCG10G003140 Citrullus lanatus HOM05D004508 ORTHO05D005180 1.1e-146 523.9 407 63.6
GSVIVG01004911001 Vitis vinifera HOM05D004508 ORTHO05D005180 1.5e-146 523.5 366 70.5
MSTRG.12061 Avicennia marina HOM05D004508 ORTHO05D005180 4.3e-146 521.9 403 63.0
TWI81G0341 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 5.6e-146 521.5 393 65.1
Carub.0006s3132 Capsella rubella HOM05D004508 ORTHO05D005180 7.3e-146 521.2 406 64.0
Aa31LG11G5140 Aethionema arabicum HOM05D004508 ORTHO05D005180 9.5e-146 520.8 379 66.2
Aa31LG9G10340 Aethionema arabicum HOM05D004508 ORTHO05D005180 1.6e-145 520.0 379 66.0
TWI60G0362 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 1.6e-145 520.0 393 64.1
A09p27030 Brassica napus HOM05D004508 ORTHO05D005180 2.1e-145 519.6 406 64.8
BraA09t38274Z Brassica rapa HOM05D004508 ORTHO05D005180 2.1e-145 519.6 406 64.8
Thhalv10028714m.g Eutrema salsugineum HOM05D004508 ORTHO05D005180 2.1e-145 519.6 402 63.9
Lj2g0024595 Lotus japonicus HOM05D004508 ORTHO05D005180 2.1e-145 519.6 380 65.8
BcaB01g02657 Brassica carinata HOM05D004508 ORTHO05D005180 2.8e-145 519.2 394 66.0
SalBow5G3960 Salvia bowleyana HOM05D004508 ORTHO05D005180 4.7e-145 518.5 388 65.5
AL6G47050 Arabidopsis lyrata HOM05D004508 ORTHO05D005180 6.2e-145 518.1 379 66.2
SalBow5G2183 Salvia bowleyana HOM05D004508 ORTHO05D005180 6.2e-145 518.1 388 65.2
BraA03t12150Z Brassica rapa HOM05D004508 ORTHO05D005180 8.0e-145 517.7 397 64.7
AT4G12130 Arabidopsis thaliana HOM05D004508 ORTHO05D005180 1.0e-144 517.3 406 63.8
BolC3t15891H Brassica oleracea HOM05D004508 ORTHO05D005180 1.0e-144 517.3 401 64.3
PSO782G0229 Papaver somniferum HOM05D004508 ORTHO05D005180 3.1e-144 515.8 390 64.6
AUR62010510 Chenopodium quinoa HOM05D004508 ORTHO05D005180 8.9e-144 514.2 397 63.5
MD04G1079500 Malus domestica HOM05D004508 ORTHO05D005180 8.9e-144 514.2 398 64.1
BcaC01g04604 Brassica carinata HOM05D004508 ORTHO05D005180 1.2e-143 513.8 403 63.5
Glyma.11G029800 Glycine max HOM05D004508 ORTHO05D005180 1.5e-143 513.5 374 65.8
Cc08_g13230 Coffea canephora HOM05D004508 ORTHO05D005180 2.0e-143 513.1 370 64.9
PGR031G2216 Punica granatum HOM05D004508 ORTHO05D005180 2.6e-143 512.7 390 63.6
Sed0020035 Sechium edule HOM05D004508 ORTHO05D005180 2.6e-143 512.7 366 67.8
CsaV3_3G003200 Cucumis sativus L. HOM05D004508 ORTHO05D005180 4.4e-143 511.9 387 64.9
Gorai.003G166400 Gossypium raimondii HOM05D004508 ORTHO05D005180 1.7e-142 510.0 386 65.5
Phvul.002G060100 Phaseolus vulgaris HOM05D004508 ORTHO05D005180 2.2e-142 509.6 376 64.6
Medtr3g078637 Medicago truncatula HOM05D004508 ORTHO05D005180 2.9e-142 509.2 393 62.6
Aa31LG11G5170 Aethionema arabicum HOM05D004508 ORTHO05D005180 4.9e-142 508.4 391 63.4
arahy.Tifrunner.gnm1.ann1.CN31X8 Arachis hypogaea HOM05D004508 ORTHO05D005180 2.4e-141 506.1 376 64.6
arahy.Tifrunner.gnm1.ann1.VMS6QR Arachis hypogaea HOM05D004508 ORTHO05D005180 2.4e-141 506.1 376 64.6
Ca_16218_v3 Cicer arietinum L. HOM05D004508 ORTHO05D005180 1.6e-140 503.4 372 64.5
ECA246G1898 Erigeron canadensis HOM05D004508 ORTHO05D005180 2.0e-140 503.1 389 62.2
ATR0757G012 Amborella trichopoda HOM05D004508 ORTHO05D005180 4.7e-137 491.9 366 65.6
Lj4g0011407 Lotus japonicus HOM05D004508 ORTHO05D005180 1.1e-136 490.7 370 65.4
CDE04G2826 Ceratophyllum demersum HOM05D004508 ORTHO05D005180 5.2e-136 488.4 389 61.4
COL.COLO4_23880 Corchorus olitorius HOM05D004508 ORTHO05D005180 2.0e-135 486.5 392 59.7
PSO478G4546 Papaver somniferum HOM05D004508 ORTHO05D005180 6.4e-134 481.5 447 55.5
VMungo1215G0237 Vigna mungo HOM05D004508 ORTHO05D005180 3.5e-132 475.7 380 62.4
ECA234G2416 Erigeron canadensis HOM05D004508 ORTHO05D005180 6.0e-132 474.9 373 61.7
Lalb_Chr25g0283101 Lupinus albus HOM05D004508 ORTHO05D005180 1.7e-131 473.4 394 59.4
C03p35810 Brassica napus HOM05D004508 ORTHO05D005180 3.1e-128 462.6 360 65.3
Os06g0134800 Oryza sativa ssp. japonica HOM05D004508 ORTHO05D005180 1.3e-126 457.2 374 58.3
HPP92_014982 Vanilla planifolia HOM05D004508 ORTHO05D005180 1.3e-126 457.2 399 56.6
HPP92_014947 Vanilla planifolia HOM05D004508 ORTHO05D005180 3.8e-126 455.7 392 56.9
Zm00001eb377920 Zea mays HOM05D004508 ORTHO05D005180 3.8e-126 455.7 369 58.8
Sabra01G0090400 Salix brachista HOM05D004508 ORTHO05D005180 1.4e-125 453.8 388 60.1
unitig_8.g3903 Utricularia gibba HOM05D004508 ORTHO05D005180 2.4e-125 453.0 362 60.2
Oeu016511.2 Olea europaea HOM05D004508 ORTHO05D005180 3.9e-123 445.7 396 57.1
SEGI_30484 Sequoiadendron giganteum HOM05D004508 ORTHO05D005180 6.6e-123 444.9 368 58.2
Pp3c2_10920 Physcomitrium patens HOM05D004508 ORTHO05D005180 1.1e-117 427.6 372 56.2
Pp3c14_15790 Physcomitrium patens HOM05D004508 ORTHO05D005180 7.8e-116 421.4 377 55.2
SMO165G0061 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 4.3e-114 415.6 381 56.4
AagrBONN_evm.TU.Sc2ySwM_344.736 Anthoceros agrestis HOM05D004508 ORTHO05D005180 4.8e-113 412.1 383 55.6
Mapoly0014s0047 Marchantia polymorpha HOM05D004508 ORTHO05D005180 5.3e-112 408.7 378 54.0
Nn2g12338 Nelumbo nucifera HOM05D004508 ORTHO05D005180 5.3e-112 408.7 291 68.0
Glyma.01G212000 Glycine max HOM05D004508 ORTHO05D005180 3.0e-107 392.9 257 70.8
MBI04_g30221_MAGBIO Magnolia biondii HOM05D004508 ORTHO05D005180 3.9e-107 392.5 625 39.2
Psat5g109880 Pisum sativum HOM05D004508 ORTHO05D005180 8.7e-107 391.3 300 64.3
C07p28450 Brassica napus HOM05D004508 ORTHO05D005180 9.6e-106 387.9 269 66.2
Psat1g081320 Pisum sativum HOM05D004508 ORTHO05D005180 3.7e-105 386.0 282 66.0
VMungo1215G2974 Vigna mungo HOM05D004508 ORTHO05D005180 1.1e-104 384.4 251 69.3
CiPaw.12G105000 Carya illinoinensis HOM05D004508 ORTHO05D005180 1.5e-103 380.6 399 52.4
AUR62017391 Chenopodium quinoa HOM05D004508 ORTHO05D005180 1.5e-103 380.6 235 73.2
SMO230G0075 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 1.5e-98 364.0 379 48.5
Dinv39078 Davidia involucrata HOM05D004508 ORTHO05D005180 2.5e-98 363.2 356 54.8
A03p29560 Brassica napus HOM05D004508 ORTHO05D005180 9.6e-98 361.3 290 59.7
BolC7t43385H Brassica oleracea HOM05D004508 ORTHO05D005180 1.4e-96 357.5 249 64.7
PSO017G0573 Papaver somniferum HOM05D004508 ORTHO05D005180 1.4e-96 357.5 250 65.6
BcaC06g34438 Brassica carinata HOM05D004508 ORTHO05D005180 2.4e-96 356.7 243 66.3
AagrBONN_evm.TU.Sc2ySwM_344.739 Anthoceros agrestis HOM05D004508 ORTHO05D005180 6.9e-96 355.1 383 51.2
CBR_g46688 Chara braunii HOM05D004508 ORTHO05D005180 3.2e-93 346.3 398 47.2
Oeu022318.1 Olea europaea HOM05D004508 ORTHO05D005180 6.9e-88 328.6 271 59.0
Gohir.D03G157900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 5.9e-87 325.5 262 63.0
Migut.A00834 Erythranthe guttata HOM05D004508 ORTHO05D005180 1.3e-86 324.3 252 62.7
Eucgr.D02019 Eucalyptus grandis HOM05D004508 ORTHO05D005180 2.0e-79 300.4 361 45.4
MELO3C013985.2 Cucumis melo HOM05D004508 ORTHO05D005180 2.5e-77 293.5 193 67.9
TPR.G214 Trifolium pratense HOM05D004508 ORTHO05D005180 8.5e-62 241.9 158 72.2
Gohir.A03G011900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 1.5e-61 241.1 295 49.5
AagrBONN_evm.TU.Sc2ySwM_344.731 Anthoceros agrestis HOM05D004508 ORTHO05D005180 2.0e-50 204.1 220 50.0
Lsat_1_v5_gn_3_76480 Lactuca sativa HOM05D004508 ORTHO05D005180 2.4e-48 197.2 217 51.6
vmacro17466 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 1.7e-46 191.0 122 73.0
MELO3C021762.2 Cucumis melo HOM05D004508 ORTHO05D005180 9.8e-42 175.3 114 70.2
MCO07G558 Micromonas commoda HOM05D004508 ORTHO05D005180 1.7e-38 164.5 403 33.7
Duzib084G0179 Durio zibethinus HOM05D004508 ORTHO05D005180 2.1e-36 157.5 173 50.3
CSS0024785 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 5.2e-35 152.9 102 66.7
PRCOL_00002067 Prasinoderma coloniale HOM05D004508 ORTHO05D005180 1.6e-31 141.4 362 29.6
VMungo1215G1224 Vigna mungo HOM05D004508 ORTHO05D005180 1.3e-30 138.3 129 55.8
Nn8g40647 Nelumbo nucifera HOM05D004508 ORTHO05D005180 3.6e-28 130.2 173 43.9
Cre10.g459000 Chlamydomonas reinhardtii HOM05D004508 ORTHO05D005180 6.8e-27 125.9 279 31.2
BolC6t40022H Brassica oleracea HOM05D004508 ORTHO05D005180 1.2e-23 115.2 102 52.9
BcaC06g35234 Brassica carinata HOM05D004508 ORTHO05D005180 1.3e-22 111.7 70 65.7
Cfa023844 Carpinus fangiana HOM05D004508 ORTHO05D005180 6.2e-20 102.8 369 25.2
BolC7t43387H Brassica oleracea HOM05D004508 ORTHO05D005180 1.4e-19 101.7 93 55.9
C03p35830 Brassica napus HOM05D004508 ORTHO05D005180 1.5e-18 98.2 93 53.8
C07p28470 Brassica napus HOM05D004508 ORTHO05D005180 1.7e-17 94.7 93 52.7
SGA_v2.0_scaffold120G32815 Striga asiatica HOM05D004508 ORTHO05D005180 6.4e-17 92.8 85 51.8
BolC3t15893H Brassica oleracea HOM05D004508 ORTHO05D005180 8.9e-11 72.4 51 52.9
BolC3t15892H Brassica oleracea HOM05D004508 ORTHO05D005180 2.2e-09 67.8 52 57.7
BcaC06g34436 Brassica carinata HOM05D004508 ORTHO05D005180 2.4e-08 64.3 55 52.7
CDE04G3100 Ceratophyllum demersum HOM05D004508 ORTHO05D005180 5.4e-08 63.2 59 49.2
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 8.7e-06 55.8 262 26.0


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