Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 5.2e-246 854.0 444 100.0
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 2.4e-166 589.3 447 67.1
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 2.1e-162 576.2 449 65.0
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 4.8e-159 565.1 449 63.9
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 2.9e-156 555.8 450 61.8
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 8.5e-156 554.3 443 63.9
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 4.2e-155 552.0 449 61.9
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 1.2e-154 550.4 451 62.5
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 1.8e-153 546.6 455 60.4
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 8.8e-153 544.3 447 62.2
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 1.5e-152 543.5 443 60.3
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 5.7e-152 541.6 451 59.9
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 1.1e-150 537.3 448 60.5
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 2.4e-150 536.2 410 67.8
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 4.1e-150 535.4 450 60.2
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 4.1e-150 535.4 447 63.8
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 4.1e-150 535.4 450 63.1
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 7.0e-150 534.6 455 60.2
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 2.0e-149 533.1 449 59.9
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 3.5e-149 532.3 449 58.6
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 1.0e-148 530.8 449 59.9
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 1.7e-148 530.0 508 56.9
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 1.7e-148 530.0 459 61.2
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 1.7e-148 530.0 445 59.3
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 3.8e-148 528.9 449 58.4
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 6.6e-148 528.1 453 59.6
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 1.5e-147 526.9 449 59.7
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 1.9e-147 526.6 449 57.9
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 2.5e-147 526.2 456 65.4
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 4.2e-147 525.4 446 64.1
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 5.5e-147 525.0 449 57.9
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 2.8e-146 522.7 450 62.4
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 1.8e-145 520.0 453 64.5
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 5.2e-145 518.5 448 59.8
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 1.2e-144 517.3 446 57.8
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 1.5e-144 516.9 445 60.0
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 5.7e-144 515.0 447 64.2
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 1.3e-143 513.8 444 62.8
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 1.3e-143 513.8 444 62.4
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 2.2e-143 513.1 445 60.2
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 8.3e-143 511.1 449 58.4
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 4.1e-142 508.8 447 58.2
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 9.2e-142 507.7 446 61.0
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 2.0e-141 506.5 450 57.6
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 2.0e-141 506.5 457 61.1
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 7.8e-141 504.6 473 56.7
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 7.8e-141 504.6 450 57.6
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 2.3e-140 503.1 453 60.3
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.1e-139 500.7 303 76.2
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 1.9e-139 500.0 448 57.6
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 1.0e-137 494.2 444 57.2
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 1.0e-137 494.2 400 61.2
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 1.4e-137 493.8 455 56.3
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 3.1e-137 492.7 462 56.5
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 4.0e-137 492.3 462 56.7
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 4.0e-137 492.3 455 58.5
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 6.8e-137 491.5 468 58.1
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 1.2e-136 490.7 421 60.3
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 7.5e-136 488.0 471 53.7
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 2.2e-135 486.5 464 55.6
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 3.7e-135 485.7 447 55.7
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 3.7e-135 485.7 450 55.6
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 8.3e-135 484.6 444 57.0
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 2.4e-134 483.0 447 55.5
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 1.2e-133 480.7 306 72.9
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.6e-133 480.3 304 73.7
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 2.7e-133 479.6 444 61.9
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 1.7e-132 476.9 448 54.0
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 2.3e-132 476.5 446 58.1
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 2.3e-132 476.5 466 53.9
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 3.3e-131 472.6 454 54.6
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 7.3e-131 471.5 310 69.4
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 2.1e-130 469.9 451 54.5
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 2.8e-130 469.5 478 52.9
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 6.2e-130 468.4 445 56.6
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 8.0e-130 468.0 459 55.1
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 2.3e-129 466.5 446 56.5
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 4.0e-129 465.7 320 66.2
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 4.4e-128 462.2 446 56.1
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 4.4e-128 462.2 446 59.2
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 5.8e-128 461.8 303 70.6
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 1.4e-126 457.2 376 60.1
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 2.4e-126 456.4 301 70.8
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 9.2e-126 454.5 425 56.5
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 6.0e-125 451.8 454 53.3
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 6.0e-125 451.8 447 53.0
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 5.2e-121 438.7 459 52.7
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 3.7e-119 432.6 278 71.9
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 2.1e-114 416.8 398 58.8
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 1.3e-111 407.5 294 65.3
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 3.9e-108 396.0 375 59.2
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 8.4e-103 378.3 246 70.7
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 8.4e-103 378.3 324 56.8
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 8.4e-103 378.3 324 56.8
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 1.0e-100 371.3 299 59.9
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 1.7e-100 370.5 220 77.7
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 2.1e-98 363.6 306 58.5
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 3.6e-98 362.8 296 60.8
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 5.8e-96 355.5 451 43.5
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.9e-95 353.2 312 56.1
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 4.2e-94 349.4 266 62.4
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 3.5e-93 346.3 365 53.4
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 2.1e-90 337.0 370 52.7
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 3.1e-89 333.2 353 55.0
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 9.0e-89 331.6 302 54.6
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 2.1e-82 310.5 201 72.1
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 2.3e-68 263.8 269 47.2
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 6.3e-66 255.8 201 61.7
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 1.3e-63 248.1 278 42.4
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 1.3e-63 248.1 203 57.6
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 1.3e-63 248.1 203 57.6
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 2.7e-53 213.8 120 79.2
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 2.0e-43 181.0 196 48.0
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 8.3e-42 175.6 264 42.0
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 5.4e-33 146.4 121 57.0
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 5.4e-33 146.4 129 54.3
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 4.5e-32 143.3 78 83.3
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 1.2e-29 135.2 118 52.5
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 2.9e-26 124.0 69 81.2
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 6.2e-21 106.3 76 61.8
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 8.9e-20 102.4 68 66.2
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 1.0e-15 89.0 53 71.7
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 2.6e-11 74.3 62 51.6
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.9e-09 68.2 120 28.3
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.7e-07 61.6 59 42.4
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 3.3e-06 57.4 41 61.0


User provided reference genes

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