Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0008830 Simmondsia chinensis HOM05D004955 ORTHO05D005965 0.0e+00 1106.3 561 100.0
GSVIVG01013229001 Vitis vinifera HOM05D004955 ORTHO05D005965 1.6e-244 849.4 559 75.8
GSVIVG01011242001 Vitis vinifera HOM05D004955 ORTHO05D005965 3.5e-239 831.6 559 74.6
EL10Ac5g12196 Beta vulgaris HOM05D004955 ORTHO05D005965 8.6e-238 827.0 561 74.2
Dinv28916 Davidia involucrata HOM05D004955 ORTHO05D005965 4.4e-234 814.7 560 74.1
Hund14430 Selenicereus undatus HOM05D004955 ORTHO05D005965 6.4e-233 810.8 569 72.2
Potri.001G146900 Populus trichocarpa HOM05D004955 ORTHO05D005965 8.4e-233 810.4 560 72.5
RcHm_v2.0_Chr7g0208321 Rosa chinensis HOM05D004955 ORTHO05D005965 1.1e-232 810.1 560 72.1
Duzib213G0438 Durio zibethinus HOM05D004955 ORTHO05D005965 3.5e-231 805.1 560 71.6
Ciclev10031124m.g Citrus clementina HOM05D004955 ORTHO05D005965 4.6e-231 804.7 560 72.7
QL12p007112 Quercus lobata HOM05D004955 ORTHO05D005965 7.8e-231 803.9 561 72.7
COL.COLO4_17563 Corchorus olitorius HOM05D004955 ORTHO05D005965 3.0e-230 802.0 560 71.6
Prupe.5G046300 Prunus persica HOM05D004955 ORTHO05D005965 1.5e-229 799.7 560 71.8
FvH4_5g21180 Fragaria vesca HOM05D004955 ORTHO05D005965 2.5e-229 798.9 559 71.6
Gorai.002G043000 Gossypium raimondii HOM05D004955 ORTHO05D005965 3.3e-229 798.5 561 72.2
Gohir.D01G034800 Gossypium hirsutum HOM05D004955 ORTHO05D005965 9.6e-229 797.0 561 72.0
CSS0030337 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 2.8e-228 795.4 560 71.2
arahy.Tifrunner.gnm1.ann1.JVPY2N Arachis hypogaea HOM05D004955 ORTHO05D005965 3.6e-228 795.0 557 72.0
arahy.Tifrunner.gnm1.ann1.U6D9EY Arachis hypogaea HOM05D004955 ORTHO05D005965 3.6e-228 795.0 557 72.0
Gohir.A01G044000 Gossypium hirsutum HOM05D004955 ORTHO05D005965 3.6e-228 795.0 561 71.1
Thecc.07G110200 Theobroma cacao HOM05D004955 ORTHO05D005965 1.1e-227 793.5 560 70.7
CSS0027312 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 1.4e-227 793.1 560 71.1
vmacro21668 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 3.1e-227 792.0 560 72.7
MD06G1040100 Malus domestica HOM05D004955 ORTHO05D005965 4.0e-227 791.6 561 70.8
FAN08G3652 Fragaria x ananassa HOM05D004955 ORTHO05D005965 5.2e-227 791.2 561 71.1
Sabra01G0115600 Salix brachista HOM05D004955 ORTHO05D005965 8.9e-227 790.4 560 71.6
FAN18G2324 Fragaria x ananassa HOM05D004955 ORTHO05D005965 1.5e-226 789.6 578 69.4
Ca_24631_v3 Cicer arietinum L. HOM05D004955 ORTHO05D005965 7.6e-226 787.3 561 71.5
VMungo1215G2917 Vigna mungo HOM05D004955 ORTHO05D005965 3.8e-225 785.0 562 71.0
Phvul.002G003600 Phaseolus vulgaris HOM05D004955 ORTHO05D005965 4.9e-225 784.6 562 70.8
Rhsim09G0128800 Rhododendron simsii HOM05D004955 ORTHO05D005965 6.4e-225 784.3 560 72.1
Nn1g00613 Nelumbo nucifera HOM05D004955 ORTHO05D005965 2.4e-224 782.3 561 71.5
Cpa.g.sc39.114 Carica papaya HOM05D004955 ORTHO05D005965 2.7e-223 778.9 560 69.6
FAN13G2236 Fragaria x ananassa HOM05D004955 ORTHO05D005965 4.6e-223 778.1 579 68.4
AUR62018770 Chenopodium quinoa HOM05D004955 ORTHO05D005965 1.0e-222 776.9 561 69.9
Lj2g0012431 Lotus japonicus HOM05D004955 ORTHO05D005965 1.0e-222 776.9 558 71.1
AUR62007230 Chenopodium quinoa HOM05D004955 ORTHO05D005965 1.3e-222 776.5 563 70.5
Glyma.20G095000 Glycine max HOM05D004955 ORTHO05D005965 1.3e-222 776.5 562 69.9
TAR375G0042 Trochodendron aralioides HOM05D004955 ORTHO05D005965 2.3e-222 775.8 560 70.7
TWI81G0724 Tripterygium wilfordii HOM05D004955 ORTHO05D005965 6.6e-222 774.2 561 70.4
Psat2g174720 Pisum sativum HOM05D004955 ORTHO05D005965 2.5e-221 772.3 561 69.9
Glyma.07G096600 Glycine max HOM05D004955 ORTHO05D005965 5.6e-221 771.2 564 69.9
Medtr5g013970 Medicago truncatula HOM05D004955 ORTHO05D005965 1.6e-220 769.6 559 70.8
Oeu039341.2 Olea europaea HOM05D004955 ORTHO05D005965 1.6e-220 769.6 585 67.5
CiPaw.12G060300 Carya illinoinensis HOM05D004955 ORTHO05D005965 2.8e-220 768.8 560 69.6
DCAR_005602 Daucus carota HOM05D004955 ORTHO05D005965 2.8e-220 768.8 556 70.0
Migut.E00912 Erythranthe guttata HOM05D004955 ORTHO05D005965 2.4e-219 765.8 556 70.1
Nitab4.5_0002055g0140 Nicotiana tabacum HOM05D004955 ORTHO05D005965 4.0e-219 765.0 560 69.3
Cc05_g03300 Coffea canephora HOM05D004955 ORTHO05D005965 5.3e-219 764.6 555 69.7
Migut.E00798 Erythranthe guttata HOM05D004955 ORTHO05D005965 5.3e-219 764.6 556 70.0
MSTRG.1970 Avicennia marina HOM05D004955 ORTHO05D005965 6.9e-219 764.2 561 69.7
Peaxi162Scf00084g00922 Petunia axillaris HOM05D004955 ORTHO05D005965 1.2e-218 763.5 587 66.4
SalBow6G1446 Salvia bowleyana HOM05D004955 ORTHO05D005965 9.9e-218 760.4 559 67.4
Atru.BG.31.p Acer truncatum HOM05D004955 ORTHO05D005965 1.3e-217 760.0 536 72.6
FAN04G2254 Fragaria x ananassa HOM05D004955 ORTHO05D005965 1.3e-217 760.0 571 68.7
Eucgr.D02153 Eucalyptus grandis HOM05D004955 ORTHO05D005965 2.9e-217 758.8 558 69.9
PGR031G1993 Punica granatum HOM05D004955 ORTHO05D005965 2.9e-217 758.8 560 70.2
AUR62001104 Chenopodium quinoa HOM05D004955 ORTHO05D005965 6.4e-217 757.7 565 69.2
Lj3A396G10 Lonicera japonica HOM05D004955 ORTHO05D005965 1.9e-216 756.1 575 68.3
CAN.G799.17 Capsicum annuum HOM05D004955 ORTHO05D005965 3.2e-216 755.4 560 68.6
Aqoxy3G03106 Aquilegia oxysepala HOM05D004955 ORTHO05D005965 4.2e-216 755.0 588 66.3
Solyc08g077270.4 Solanum lycopersicum HOM05D004955 ORTHO05D005965 4.2e-216 755.0 559 68.0
Sopen08g025850 Solanum pennellii HOM05D004955 ORTHO05D005965 5.4e-216 754.6 559 68.2
PSO017G5366 Papaver somniferum HOM05D004955 ORTHO05D005965 6.0e-215 751.1 561 69.9
PSO063G1154 Papaver somniferum HOM05D004955 ORTHO05D005965 1.0e-214 750.4 561 69.5
MBI04_g44837_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 5.6e-213 744.6 580 67.4
PSO541G5086 Papaver somniferum HOM05D004955 ORTHO05D005965 2.8e-212 742.3 561 68.8
MD16G1269200 Malus domestica HOM05D004955 ORTHO05D005965 1.8e-211 739.6 568 67.4
vmacro00352 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 1.2e-210 736.9 540 71.3
Sed0006321 Sechium edule HOM05D004955 ORTHO05D005965 3.4e-210 735.3 563 67.1
THA.LOC104814429 Tarenaya hassleriana HOM05D004955 ORTHO05D005965 8.4e-209 730.7 559 66.9
CsaV3_1G038770 Cucumis sativus L. HOM05D004955 ORTHO05D005965 3.2e-208 728.8 564 65.6
Manes.15G172800 Manihot esculenta HOM05D004955 ORTHO05D005965 3.2e-208 728.8 509 71.1
MELO3C015301.2 Cucumis melo HOM05D004955 ORTHO05D005965 4.6e-207 724.9 564 66.1
Actinidia25945 Actinidia chinensis HOM05D004955 ORTHO05D005965 6.0e-207 724.5 561 67.2
Aa31LG9G15390 Aethionema arabicum HOM05D004955 ORTHO05D005965 4.8e-204 714.9 564 65.4
Haze_07894 Corylus avellana HOM05D004955 ORTHO05D005965 4.8e-204 714.9 562 66.9
Nitab4.5_0006693g0050 Nicotiana tabacum HOM05D004955 ORTHO05D005965 4.8e-204 714.9 518 70.1
MBI04_g29834_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 8.1e-204 714.1 570 66.3
Lalb_Chr16g0379231 Lupinus albus HOM05D004955 ORTHO05D005965 1.4e-203 713.4 497 72.4
Carub.0006s1636 Capsella rubella HOM05D004955 ORTHO05D005965 2.4e-203 712.6 561 65.2
Lsat_1_v5_gn_6_66461 Lactuca sativa HOM05D004955 ORTHO05D005965 2.4e-203 712.6 561 67.2
CANSAT80G1132 Cannabis sativa HOM05D004955 ORTHO05D005965 4.0e-203 711.8 560 65.2
CARHR195050 Cardamine hirsuta HOM05D004955 ORTHO05D005965 9.0e-203 710.7 559 66.2
Thhalv10013080m.g Eutrema salsugineum HOM05D004955 ORTHO05D005965 1.5e-202 709.9 561 65.4
AL6G29260 Arabidopsis lyrata HOM05D004955 ORTHO05D005965 2.2e-201 706.1 559 65.1
HPP92_017500 Vanilla planifolia HOM05D004955 ORTHO05D005965 6.5e-201 704.5 558 64.9
ATR0829G014 Amborella trichopoda HOM05D004955 ORTHO05D005965 1.9e-200 703.0 558 63.8
AT5G18070 Arabidopsis thaliana HOM05D004955 ORTHO05D005965 3.2e-200 702.2 559 63.9
Sp6g26230 Schrenkiella parvula HOM05D004955 ORTHO05D005965 1.8e-198 696.4 561 64.7
HanXRQChr14g0455871 Helianthus annuus HOM05D004955 ORTHO05D005965 3.0e-198 695.7 543 67.6
CSS0006893 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 6.7e-198 694.5 498 71.1
ECA233G2813 Erigeron canadensis HOM05D004955 ORTHO05D005965 3.7e-196 688.7 560 64.5
ClCG03G017340 Citrullus lanatus HOM05D004955 ORTHO05D005965 4.1e-195 685.3 562 63.7
BraA10t44206Z Brassica rapa HOM05D004955 ORTHO05D005965 2.6e-194 682.6 558 62.5
C09p58920 Brassica napus HOM05D004955 ORTHO05D005965 4.5e-194 681.8 558 62.7
BolC9t58736H Brassica oleracea HOM05D004955 ORTHO05D005965 1.3e-193 680.2 558 62.9
BcaC04g18728 Brassica carinata HOM05D004955 ORTHO05D005965 2.2e-193 679.5 558 62.7
PGSC0003DMG400024224 Solanum tuberosum HOM05D004955 ORTHO05D005965 1.1e-192 677.2 497 68.4
SGA_v2.0_scaffold18G08384 Striga asiatica HOM05D004955 ORTHO05D005965 1.1e-192 677.2 498 67.9
A10p21440 Brassica napus HOM05D004955 ORTHO05D005965 2.5e-192 676.0 559 62.3
C03p10070 Brassica napus HOM05D004955 ORTHO05D005965 2.5e-192 676.0 557 62.3
BraA03t10187Z Brassica rapa HOM05D004955 ORTHO05D005965 3.2e-192 675.6 557 62.3
BcaB01g05173 Brassica carinata HOM05D004955 ORTHO05D005965 1.6e-191 673.3 558 62.2
BolC3t13493H Brassica oleracea HOM05D004955 ORTHO05D005965 1.6e-191 673.3 558 62.2
A03p08630 Brassica napus HOM05D004955 ORTHO05D005965 3.0e-190 669.1 556 62.4
Os07g0195400 Oryza sativa ssp. japonica HOM05D004955 ORTHO05D005965 2.5e-184 649.4 537 60.5
unitig_21.g20378 Utricularia gibba HOM05D004955 ORTHO05D005965 9.4e-184 647.5 544 62.3
SEGI_00537 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 6.7e-182 641.3 558 60.0
Zm00001eb119880 Zea mays HOM05D004955 ORTHO05D005965 3.1e-179 632.5 545 60.0
BcaB08g36711 Brassica carinata HOM05D004955 ORTHO05D005965 8.5e-169 597.8 560 58.0
Haze_08303 Corylus avellana HOM05D004955 ORTHO05D005965 6.7e-166 588.2 427 69.6
SHI01417 Sapria himalayana HOM05D004955 ORTHO05D005965 7.7e-162 574.7 446 66.4
Pp3c15_140 Physcomitrium patens HOM05D004955 ORTHO05D005965 2.2e-156 556.6 559 53.5
Dinv25184 Davidia involucrata HOM05D004955 ORTHO05D005965 2.9e-153 546.2 401 70.1
Haze_08299 Corylus avellana HOM05D004955 ORTHO05D005965 5.0e-153 545.4 505 59.0
AagrBONN_evm.TU.Sc2ySwM_362.507 Anthoceros agrestis HOM05D004955 ORTHO05D005965 1.8e-150 537.0 558 52.5
CBR_g36832 Chara braunii HOM05D004955 ORTHO05D005965 6.3e-148 528.5 571 52.2
Mapoly0074s0077 Marchantia polymorpha HOM05D004955 ORTHO05D005965 2.4e-147 526.6 556 51.3
SGA_v2.0_scaffold157G37418 Striga asiatica HOM05D004955 ORTHO05D005965 4.1e-147 525.8 456 61.0
Atru.chr6.1775 Acer truncatum HOM05D004955 ORTHO05D005965 4.7e-143 512.3 362 72.4
SMO174G0171 Selaginella moellendorffii HOM05D004955 ORTHO05D005965 1.6e-138 497.3 541 50.1
CDE08G0647 Ceratophyllum demersum HOM05D004955 ORTHO05D005965 3.0e-137 493.0 409 61.1
Haze_08304 Corylus avellana HOM05D004955 ORTHO05D005965 1.4e-115 421.0 407 56.3
PRCOL_00000375 Prasinoderma coloniale HOM05D004955 ORTHO05D005965 9.2e-115 418.3 536 47.2
Glyma.01G201400 Glycine max HOM05D004955 ORTHO05D005965 3.5e-114 416.4 299 71.2
MCO08G085 Micromonas commoda HOM05D004955 ORTHO05D005965 4.0e-110 402.9 581 41.5
Nn3g19414 Nelumbo nucifera HOM05D004955 ORTHO05D005965 1.2e-101 374.8 281 66.9
TPR.G6765 Trifolium pratense HOM05D004955 ORTHO05D005965 3.2e-99 366.7 570 42.5
Cre08.g379700 Chlamydomonas reinhardtii HOM05D004955 ORTHO05D005965 1.6e-98 364.4 545 42.2
Glyma.16G093333 Glycine max HOM05D004955 ORTHO05D005965 6.5e-76 289.3 201 73.6
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 1.3e-73 281.6 487 39.6
MD09G1284100 Malus domestica HOM05D004955 ORTHO05D005965 2.5e-59 234.2 381 41.7
Haze_26496 Corylus avellana HOM05D004955 ORTHO05D005965 2.7e-50 204.1 281 44.1
Glyma.16G093267 Glycine max HOM05D004955 ORTHO05D005965 4.8e-47 193.4 142 69.0
Glyma.01G201300 Glycine max HOM05D004955 ORTHO05D005965 2.7e-42 177.6 142 65.5
BcaB01g01790 Brassica carinata HOM05D004955 ORTHO05D005965 6.8e-41 172.9 147 59.2
SEGI_27182 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 7.5e-40 169.5 272 40.8
Haze_08302 Corylus avellana HOM05D004955 ORTHO05D005965 2.7e-37 161.0 192 51.6
Cc05_g03290 Coffea canephora HOM05D004955 ORTHO05D005965 2.3e-33 147.9 110 65.5
SHI01420 Sapria himalayana HOM05D004955 ORTHO05D000023 1.7e-28 131.7 114 57.0
BcaB01g06395 Brassica carinata HOM05D004955 ORTHO05D005965 2.3e-28 131.3 100 63.0
SEGI_19301 Sequoiadendron giganteum HOM05D005396 ORTHO05D006400 1.4e-25 122.1 140 50.0
vmacro21667 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 3.4e-24 117.5 87 70.1
CARHR185470 Cardamine hirsuta HOM05D004955 ORTHO05D005965 5.4e-22 110.2 85 62.4
Glyma.16G093100 Glycine max HOM05D004955 ORTHO05D005965 7.0e-22 109.8 78 67.9
Ah.04g153990 Amaranthus hybridus HOM05D004955 ORTHO05D005965 9.5e-19 99.4 202 33.7
ATR0149G020 Amborella trichopoda HOM05D004955 ORTHO05D005965 8.0e-18 96.3 87 57.5
Haze_08300 Corylus avellana HOM05D004955 ORTHO05D005965 4.0e-17 94.0 88 61.4
SEGI_05540 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 1.1e-14 85.9 71 59.2


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