Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0008440 Simmondsia chinensis HOM05D005120 ORTHO05D006174 9.2e-290 999.6 529 100.0
Ah.07g201110 Amaranthus hybridus HOM05D005120 ORTHO05D006174 4.4e-207 724.9 535 74.4
EL10Ac5g11981 Beta vulgaris HOM05D005120 ORTHO05D006174 2.4e-205 719.2 535 74.8
AUR62018612 Chenopodium quinoa HOM05D005120 ORTHO05D006174 6.5e-203 711.1 523 73.6
Potri.003G099600 Populus trichocarpa HOM05D005120 ORTHO05D006174 5.7e-199 698.0 467 79.0
Nitab4.5_0000543g0120 Nicotiana tabacum HOM05D005120 ORTHO05D006174 1.7e-198 696.4 495 76.0
Eucgr.E01259 Eucalyptus grandis HOM05D005120 ORTHO05D006174 2.2e-198 696.0 460 78.9
Hund14388 Selenicereus undatus HOM05D005120 ORTHO05D006174 4.5e-196 688.3 539 70.9
Solyc08g076290.3 Solanum lycopersicum HOM05D005120 ORTHO05D006174 7.7e-196 687.6 440 81.1
Sopen08g024900 Solanum pennellii HOM05D005120 ORTHO05D006174 7.7e-196 687.6 440 81.1
GSVIVG01029984001 Vitis vinifera HOM05D005120 ORTHO05D006174 7.7e-196 687.6 452 81.2
Duzib205G1724 Durio zibethinus HOM05D005120 ORTHO05D006174 1.7e-195 686.4 530 71.3
Rhsim11G0027600 Rhododendron simsii HOM05D005120 ORTHO05D006174 1.7e-195 686.4 547 71.1
Sabra03G0067700 Salix brachista HOM05D005120 ORTHO05D006174 3.8e-195 685.3 456 79.6
Cc08_g03980 Coffea canephora HOM05D005120 ORTHO05D006174 6.5e-195 684.5 537 70.8
TWI60G0565 Tripterygium wilfordii HOM05D005120 ORTHO05D006174 1.5e-194 683.3 471 76.9
Cfa012552 Carpinus fangiana HOM05D005120 ORTHO05D006174 3.2e-194 682.2 526 70.7
Thecc.03G314000 Theobroma cacao HOM05D005120 ORTHO05D006174 7.2e-194 681.0 541 69.9
Gohir.A03G000018 Gossypium hirsutum HOM05D005120 ORTHO05D006174 9.4e-194 680.6 469 77.2
CiPaw.11G101100 Carya illinoinensis HOM05D005120 ORTHO05D006174 1.2e-193 680.2 467 74.9
Gorai.003G186700 Gossypium raimondii HOM05D005120 ORTHO05D006174 2.1e-193 679.5 469 76.8
PGSC0003DMG402009291 Solanum tuberosum HOM05D005120 ORTHO05D006174 2.1e-193 679.5 435 81.1
MD06G1023600 Malus domestica HOM05D005120 ORTHO05D006174 3.6e-193 678.7 454 79.3
Gohir.D03G177466 Gossypium hirsutum HOM05D005120 ORTHO05D006174 4.7e-193 678.3 469 76.8
Nitab4.5_0006395g0010 Nicotiana tabacum HOM05D005120 ORTHO05D006174 8.0e-193 677.6 469 77.2
Nn1g01918 Nelumbo nucifera HOM05D005120 ORTHO05D006174 1.0e-192 677.2 465 77.4
TAR374G0846 Trochodendron aralioides HOM05D005120 ORTHO05D006174 1.8e-192 676.4 457 78.8
PGR042G0860 Punica granatum HOM05D005120 ORTHO05D006174 2.3e-192 676.0 500 72.0
MSTRG.11896 Avicennia marina HOM05D005120 ORTHO05D006174 3.0e-192 675.6 530 70.0
Lalb_Chr16g0391911 Lupinus albus HOM05D005120 ORTHO05D006174 4.0e-192 675.2 474 76.2
Lsat_1_v5_gn_6_17781 Lactuca sativa HOM05D005120 ORTHO05D006174 5.2e-192 674.9 526 70.7
Glyma.16G095100 Glycine max HOM05D005120 ORTHO05D006174 8.8e-192 674.1 438 80.4
Medtr8g070830 Medicago truncatula HOM05D005120 ORTHO05D006174 1.2e-191 673.7 516 71.5
AUR62007376 Chenopodium quinoa HOM05D005120 ORTHO05D006174 1.5e-191 673.3 405 85.9
Prupe.5G024500 Prunus persica HOM05D005120 ORTHO05D006174 2.6e-191 672.5 456 78.5
arahy.Tifrunner.gnm1.ann1.H9FFKJ Arachis hypogaea HOM05D005120 ORTHO05D006174 3.3e-191 672.2 477 75.3
Thhalv10007389m.g Eutrema salsugineum HOM05D005120 ORTHO05D006174 1.3e-190 670.2 485 73.4
THA.LOC104798500 Tarenaya hassleriana HOM05D005120 ORTHO05D006174 1.3e-190 670.2 470 74.9
Cpa.g.sc757.1 Carica papaya HOM05D005120 ORTHO05D006174 1.7e-190 669.8 537 69.5
vmacro00236 Vaccinium macrocarpon HOM05D005120 ORTHO05D006174 1.7e-190 669.8 448 80.1
Manes.17G006500 Manihot esculenta HOM05D005120 ORTHO05D006174 2.2e-190 669.5 466 75.8
CARHR031430 Cardamine hirsuta HOM05D005120 ORTHO05D006174 1.1e-189 667.2 454 76.7
COL.COLO4_16896 Corchorus olitorius HOM05D005120 ORTHO05D006174 2.4e-189 666.0 451 78.0
Lj4g0011317 Lotus japonicus HOM05D005120 ORTHO05D006174 2.4e-189 666.0 505 71.7
Phvul.003G274000 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 4.1e-189 665.2 446 78.7
SGA_v2.0_scaffold42G16013 Striga asiatica HOM05D005120 ORTHO05D006174 4.1e-189 665.2 463 75.8
Dinv29029 Davidia involucrata HOM05D005120 ORTHO05D006174 7.0e-189 664.5 432 81.0
FAN08G2640 Fragaria x ananassa HOM05D005120 ORTHO05D006174 1.2e-188 663.7 439 80.4
CANSAT21G0750 Cannabis sativa HOM05D005120 ORTHO05D006174 1.6e-188 663.3 453 75.5
Actinidia27272 Actinidia chinensis HOM05D005120 ORTHO05D006174 3.5e-188 662.1 517 70.6
CAN.G773.16 Capsicum annuum HOM05D005120 ORTHO05D006174 3.5e-188 662.1 405 85.7
QL12p000342 Quercus lobata HOM05D005120 ORTHO05D006174 3.5e-188 662.1 451 76.9
VMungo0251G1066 Vigna mungo HOM05D005120 ORTHO05D006174 3.5e-188 662.1 453 77.0
BraA09t38958Z Brassica rapa HOM05D005120 ORTHO05D006174 7.7e-188 661.0 435 78.6
FvH4_5g23540 Fragaria vesca HOM05D005120 ORTHO05D006174 1.0e-187 660.6 458 77.7
Migut.A00586 Erythranthe guttata HOM05D005120 ORTHO05D006174 1.3e-187 660.2 506 70.9
FAN04G0205 Fragaria x ananassa HOM05D005120 ORTHO05D006174 1.3e-187 660.2 439 79.5
SalBow1G1967 Salvia bowleyana HOM05D005120 ORTHO05D006174 1.3e-187 660.2 497 71.8
FAN18G1216 Fragaria x ananassa HOM05D005120 ORTHO05D006174 2.2e-187 659.4 458 77.5
HanXRQChr02g0050021 Helianthus annuus HOM05D005120 ORTHO05D006174 2.2e-187 659.4 499 71.3
Aa31LG2G13920 Aethionema arabicum HOM05D005120 ORTHO05D006174 3.8e-187 658.7 439 77.0
AT1G32080 Arabidopsis thaliana HOM05D005120 ORTHO05D006174 3.8e-187 658.7 460 75.7
Carub.0001s3040 Capsella rubella HOM05D005120 ORTHO05D006174 3.8e-187 658.7 455 76.5
Oeu042231.1 Olea europaea HOM05D005120 ORTHO05D006174 3.8e-187 658.7 533 68.5
FAN18G2593 Fragaria x ananassa HOM05D005120 ORTHO05D006174 5.0e-187 658.3 458 77.3
BcaC05g27233 Brassica carinata HOM05D005120 ORTHO05D006174 6.5e-187 657.9 435 78.4
C05p31470 Brassica napus HOM05D005120 ORTHO05D006174 6.5e-187 657.9 435 78.4
BolC5t31871H Brassica oleracea HOM05D005120 ORTHO05D006174 6.5e-187 657.9 435 78.4
RcHm_v2.0_Chr7g0212851 Rosa chinensis HOM05D005120 ORTHO05D006174 6.5e-187 657.9 453 77.5
BcaB03g13768 Brassica carinata HOM05D005120 ORTHO05D006174 1.5e-186 656.8 463 74.5
BcaC05g27930 Brassica carinata HOM05D005120 ORTHO05D006174 1.5e-186 656.8 454 75.6
Sp1g27750 Schrenkiella parvula HOM05D005120 ORTHO05D006174 3.2e-186 655.6 454 76.0
Atru.chr6.1569 Acer truncatum HOM05D005120 ORTHO05D006174 7.2e-186 654.4 454 75.8
AL1G46150 Arabidopsis lyrata HOM05D005120 ORTHO05D006174 1.2e-185 653.7 455 76.0
BraA05t21413Z Brassica rapa HOM05D005120 ORTHO05D006174 1.2e-185 653.7 454 75.8
CsaV3_3G030430 Cucumis sativus L. HOM05D005120 ORTHO05D006174 1.2e-185 653.7 441 77.8
arahy.Tifrunner.gnm1.ann1.PMQ83Q Arachis hypogaea HOM05D005120 ORTHO05D006174 1.6e-185 653.3 443 77.7
MELO3C026723.2 Cucumis melo HOM05D005120 ORTHO05D006174 2.1e-185 652.9 441 77.3
Peaxi162Scf00408g00023 Petunia axillaris HOM05D005120 ORTHO05D006174 2.1e-185 652.9 413 82.3
ClCG07G002270 Citrullus lanatus HOM05D005120 ORTHO05D006174 2.7e-185 652.5 440 76.6
Haze_08107 Corylus avellana HOM05D005120 ORTHO05D006174 2.7e-185 652.5 580 64.1
Aqoxy7G00879 Aquilegia oxysepala HOM05D005120 ORTHO05D006174 1.0e-184 650.6 499 71.7
Psat4g111760 Pisum sativum HOM05D005120 ORTHO05D006174 1.4e-184 650.2 510 69.2
Sed0007636 Sechium edule HOM05D005120 ORTHO05D006174 1.8e-184 649.8 440 76.6
Lj8A318T44 Lonicera japonica HOM05D005120 ORTHO05D006174 2.6e-183 646.0 468 76.3
CDE06G0533 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 1.1e-181 640.6 439 76.3
MBI04_g36023_MAGBIO Magnolia biondii HOM05D005120 ORTHO05D006174 1.4e-181 640.2 455 76.5
SGA_v2.0_scaffold89G27426 Striga asiatica HOM05D005120 ORTHO05D006174 7.0e-181 637.9 434 77.0
TPR.G6179 Trifolium pratense HOM05D005120 ORTHO05D006174 4.5e-180 635.2 546 65.4
C05p39360 Brassica napus HOM05D005120 ORTHO05D006174 7.7e-180 634.4 440 75.2
BolC5t32672H Brassica oleracea HOM05D005120 ORTHO05D006174 7.7e-180 634.4 440 75.2
BcaB07g32869 Brassica carinata HOM05D005120 ORTHO05D006174 2.9e-179 632.5 460 73.3
Aa31LG2G11060 Aethionema arabicum HOM05D005120 ORTHO05D006174 3.8e-179 632.1 439 75.4
A05p25290 Brassica napus HOM05D005120 ORTHO05D006174 5.0e-179 631.7 440 75.5
Os01g0511600 Oryza sativa ssp. japonica HOM05D005120 ORTHO05D006174 5.0e-179 631.7 431 75.2
Sed0003941 Sechium edule HOM05D005120 ORTHO05D006174 1.2e-177 627.1 447 73.6
ECA233G2235 Erigeron canadensis HOM05D005120 ORTHO05D006174 2.1e-177 626.3 436 77.5
Hund11160 Selenicereus undatus HOM05D005120 ORTHO05D006174 3.6e-177 625.5 540 65.2
Ca_22546_v3 Cicer arietinum L. HOM05D005120 ORTHO05D006174 8.0e-177 624.4 406 78.6
Nn3g19343 Nelumbo nucifera HOM05D005120 ORTHO05D006174 2.2e-174 616.3 467 70.7
Glyma.01G009900 Glycine max HOM05D005120 ORTHO05D006174 1.8e-173 613.2 434 74.4
A09p34100 Brassica napus HOM05D005120 ORTHO05D006174 2.4e-173 612.8 407 77.6
Zm00001eb025160 Zea mays HOM05D005120 ORTHO05D006174 3.1e-173 612.5 460 71.3
Phvul.002G132800 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 5.4e-173 611.7 445 72.6
ATR0829G037 Amborella trichopoda HOM05D005120 ORTHO05D006174 5.9e-172 608.2 439 72.9
PSO717G0011 Papaver somniferum HOM05D005120 ORTHO05D006174 1.0e-171 607.4 417 76.7
Glyma.09G211200 Glycine max HOM05D005120 ORTHO05D006174 2.5e-170 602.8 434 73.7
PSO675G2578 Papaver somniferum HOM05D005120 ORTHO05D006174 1.3e-166 590.5 473 68.7
DCAR_004262 Daucus carota HOM05D005120 ORTHO05D006174 1.1e-165 587.4 440 71.4
Atru.chr6.1566 Acer truncatum HOM05D005120 ORTHO05D006174 5.4e-165 585.1 482 69.5
Lalb_Chr16g0380871 Lupinus albus HOM05D005120 ORTHO05D006174 1.5e-162 577.0 417 70.0
unitig_747.g21935 Utricularia gibba HOM05D005120 ORTHO05D006174 2.1e-161 573.2 442 68.8
CSS0018999 Camellia sinensis var. sinensis HOM05D005120 ORTHO05D006174 8.9e-160 567.8 421 74.6
arahy.Tifrunner.gnm1.ann1.1W9K9Y Arachis hypogaea HOM05D005120 ORTHO05D006174 3.5e-148 529.3 436 65.6
arahy.Tifrunner.gnm1.ann1.5B6WJ4 Arachis hypogaea HOM05D005120 ORTHO05D006174 3.5e-148 529.3 436 65.6
AagrBONN_evm.TU.Sc2ySwM_117.3701 Anthoceros agrestis HOM05D005120 ORTHO05D006174 8.1e-145 518.1 417 64.0
Pp3c1_16500 Physcomitrium patens HOM05D005120 ORTHO05D006174 9.2e-141 504.6 435 61.1
Mapoly0008s0007 Marchantia polymorpha HOM05D005120 ORTHO05D006174 6.2e-137 491.9 475 56.8
Actinidia01339 Actinidia chinensis HOM05D005120 ORTHO05D006174 3.2e-133 479.6 380 71.8
SMO347G0341 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 3.8e-126 456.1 367 65.4
Dinv06901 Davidia involucrata HOM05D005120 ORTHO05D006174 9.3e-125 451.4 381 67.2
Ciclev10003461m.g Citrus clementina HOM05D005120 ORTHO05D006174 4.6e-124 449.1 378 63.8
Atru.chr6.1568 Acer truncatum HOM05D005120 ORTHO05D006174 2.3e-107 393.7 230 89.6
PRCOL_00000663 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 1.8e-99 367.5 418 48.8
Lalb_Chr16g0380881 Lupinus albus HOM05D005120 ORTHO05D006174 8.8e-83 312.0 422 45.5
Atru.chr6.1567 Acer truncatum HOM05D005120 ORTHO05D006174 6.3e-81 305.8 253 66.0
Cre09.g394850 Chlamydomonas reinhardtii HOM05D005120 ORTHO05D006174 8.0e-76 288.9 415 41.7
FAN13G2921 Fragaria x ananassa HOM05D005120 ORTHO05D006174 8.0e-76 288.9 287 57.8
Glyma.08G265967 Glycine max HOM05D005120 ORTHO05D006174 7.0e-72 275.8 169 88.2
SMO367G1009 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 3.8e-70 270.0 386 39.1
CANSAT64G2484 Cannabis sativa HOM05D005120 ORTHO05D006174 7.5e-66 255.8 156 87.2
Pp3c4_7680 Physcomitrium patens HOM05D005120 ORTHO05D006174 6.3e-65 252.7 449 35.2
Zm00001eb025140 Zea mays HOM05D005120 ORTHO05D006174 2.0e-63 247.7 200 63.0
AagrBONN_evm.TU.Sc2ySwM_368.2516 Anthoceros agrestis HOM05D005120 ORTHO05D006174 2.5e-61 240.7 376 38.0
PRCOL_00006607 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 5.9e-55 219.5 453 37.5
CBR_g23155 Chara braunii HOM05D005120 ORTHO05D006174 3.1e-51 207.2 162 67.3
arahy.Tifrunner.gnm1.ann1.B01XES Arachis hypogaea HOM05D005120 ORTHO05D006174 8.9e-51 205.7 266 47.4
SEGI_09610 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 7.5e-42 176.0 126 69.8
PGR044G1750 Punica granatum HOM05D005120 ORTHO05D006174 2.2e-33 147.9 138 60.1
SEGI_28661 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 7.8e-31 139.4 136 58.1
CARHR291910 Cardamine hirsuta HOM05D005120 ORTHO05D006174 2.0e-26 124.8 86 67.4
CBR_g23153 Chara braunii HOM05D005120 ORTHO05D006174 1.7e-25 121.7 156 47.4
VMungo0647G0996 Vigna mungo HOM05D005120 ORTHO05D006174 4.6e-23 113.6 97 70.1
Oeu023967.3 Olea europaea HOM05D005120 ORTHO05D006174 1.3e-20 105.5 155 44.5
MCO13G610 Micromonas commoda HOM05D005120 ORTHO05D006174 2.4e-19 101.3 387 25.1
PRCOL_00001036 Prasinoderma coloniale HOM05D001145 ORTHO05D014381 1.6e-12 78.6 447 26.0
CDE03G0049 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 2.1e-12 78.2 67 68.7
PRCOL_00005007 Prasinoderma coloniale HOM05D013059 ORTHO05D014381 9.0e-11 72.8 221 28.1


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