Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 1.7e-171 605.9 307 100.0
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 4.3e-82 308.9 318 53.8
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 2.9e-78 296.2 327 51.7
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 2.8e-73 279.6 343 49.3
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 1.1e-72 277.7 323 50.5
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 3.1e-72 276.2 312 52.2
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 6.5e-70 268.5 335 46.3
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 8.5e-70 268.1 315 49.8
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 3.2e-69 266.2 323 49.2
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 7.2e-69 265.0 333 44.1
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 9.3e-69 264.6 278 56.5
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 7.9e-68 261.5 330 44.8
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 2.3e-67 260.0 323 46.1
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.1e-66 257.7 337 45.1
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 3.3e-66 256.1 340 43.5
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 4.3e-66 255.8 337 44.8
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 4.3e-66 255.8 341 44.0
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 4.3e-66 255.8 340 44.1
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 5.7e-66 255.4 345 46.1
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 9.7e-66 254.6 329 45.3
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 1.6e-65 253.8 295 49.8
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 2.8e-65 253.1 321 47.4
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 8.2e-65 251.5 321 47.0
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 2.4e-64 250.0 350 43.7
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 6.9e-64 248.4 321 46.4
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 1.2e-63 247.7 327 45.9
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.2e-63 247.7 337 43.9
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 4.5e-63 245.7 303 46.9
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 4.5e-63 245.7 320 45.9
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 4.5e-63 245.7 345 43.5
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 1.0e-62 244.6 289 49.8
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 1.0e-62 244.6 327 44.3
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 1.7e-62 243.8 325 44.0
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 8.5e-62 241.5 335 43.9
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 1.1e-61 241.1 335 42.7
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 1.9e-61 240.4 311 45.3
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 2.5e-61 240.0 311 44.7
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 5.5e-61 238.8 339 43.4
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 1.2e-60 237.7 325 42.2
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 1.6e-60 237.3 335 43.9
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 1.0e-59 234.6 335 42.1
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 1.4e-59 234.2 324 43.8
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 2.3e-59 233.4 328 40.5
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 2.3e-59 233.4 312 44.6
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 3.0e-59 233.0 286 44.8
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 5.1e-59 232.3 336 41.1
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 1.5e-58 230.7 313 46.0
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 2.0e-58 230.3 309 43.7
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 2.0e-58 230.3 303 42.2
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 2.6e-58 229.9 322 43.2
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 2.6e-58 229.9 320 43.4
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 3.3e-58 229.6 326 43.3
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 4.4e-58 229.2 234 55.1
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 9.7e-58 228.0 291 48.5
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 1.3e-57 227.6 310 44.2
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 1.4e-56 224.2 305 40.7
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 3.1e-56 223.0 333 40.8
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 5.9e-55 218.8 306 41.2
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 6.5e-54 215.3 314 40.8
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 6.5e-54 215.3 325 40.6
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 4.2e-53 212.6 319 44.2
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 1.2e-52 211.1 276 47.5
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 2.3e-51 206.8 333 39.6
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 5.2e-51 205.7 320 39.7
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 6.7e-51 205.3 340 38.2
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 3.3e-50 203.0 325 39.4
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 2.2e-49 200.3 264 45.5
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 2.2e-49 200.3 322 39.4
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 2.8e-49 199.9 296 41.6
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 2.8e-49 199.9 296 41.6
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 5.9e-47 192.2 287 42.2
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 3.8e-46 189.5 328 39.9
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 4.2e-45 186.0 250 46.8
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 4.2e-45 186.0 250 46.8
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 1.2e-44 184.5 290 40.7
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 2.7e-44 183.3 293 39.2
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 1.8e-40 170.6 271 41.3
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 2.4e-40 170.2 208 48.1
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 6.5e-38 162.2 276 39.9
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 3.2e-37 159.8 287 35.9
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 8.0e-36 155.2 310 34.2
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 1.8e-35 154.1 310 35.8
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 4.0e-35 152.9 303 34.7
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 6.8e-35 152.1 310 34.5
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 6.8e-35 152.1 265 37.4
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 6.8e-35 152.1 283 37.1
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 1.2e-34 151.4 313 33.5
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 2.0e-34 150.6 299 34.4
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 2.6e-34 150.2 310 34.2
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 2.6e-34 150.2 310 34.2
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 3.4e-34 149.8 323 33.1
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 9.8e-34 148.3 310 33.5
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 2.8e-33 146.7 310 33.9
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 3.1e-32 143.3 275 36.0
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 9.1e-32 141.7 301 34.2
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.2e-31 141.4 275 35.6
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 1.6e-31 141.0 310 32.9
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 2.0e-31 140.6 212 42.0
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 5.0e-30 136.0 98 71.4
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 4.2e-29 132.9 258 38.8
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 2.8e-28 130.2 269 33.5
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 1.0e-27 128.3 246 35.0
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 3.0e-27 126.7 257 33.5
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 2.6e-26 123.6 117 56.4
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 3.4e-26 123.2 117 54.7
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 3.4e-26 123.2 117 54.7
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 5.0e-22 109.4 249 32.1
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 8.6e-22 108.6 262 30.2
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 1.9e-21 107.5 249 32.1
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 4.3e-21 106.3 233 35.6
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 4.7e-20 102.8 121 46.3
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 1.2e-18 98.2 315 27.0
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 6.6e-14 82.4 215 32.1
HanXRQChr04g0096591 Helianthus annuus HOM05D006619 ORTHO05D008351 1.8e-11 74.3 84 44.0


User provided reference genes

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